RNA–Protein interactions for RNA: ENST00000429670.2

GYPB-201, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-201ENST00000429670 AEBP2Q6ZN18 517 aaPredicted RBP21.37■■□□□ 1.01
GYPB-201ENST00000429670 CHIC1Q5VXU3 224 aa20.12■□□□□ 0.81
GYPB-201ENST00000429670 SENP3Q9H4L4 574 aaPredicted RBP18.42■□□□□ 0.54
GYPB-201ENST00000429670 PHF23Q9BUL5 403 aaPredicted RBP18.1■□□□□ 0.49
GYPB-201ENST00000429670 FOXD1Q16676 465 aa17.13■□□□□ 0.33
GYPB-201ENST00000429670 POTEDQ86YR6 584 aa16.43■□□□□ 0.22
GYPB-201ENST00000429670 MSH5O43196 834 aa16.28■□□□□ 0.2
GYPB-201ENST00000429670 PIAS4Q8N2W9 510 aaPredicted RBP15.95■□□□□ 0.14
GYPB-201ENST00000429670 PLPPR3Q6T4P5 718 aa15.88■□□□□ 0.13
GYPB-201ENST00000429670 PPP6R1Q9UPN7 881 aa15.7■□□□□ 0.1
GYPB-201ENST00000429670 ADRA2BP18089 450 aa15.65■□□□□ 0.1
GYPB-201ENST00000429670 DMRT2Q9Y5R5 561 aa14.52□□□□□ -0.09
GYPB-201ENST00000429670 SCAF1Q9H7N4 1312 aaKnown RBP14.49□□□□□ -0.09
GYPB-201ENST00000429670 MAPK8IP2Q13387 824 aaPredicted RBP14.48□□□□□ -0.09
GYPB-201ENST00000429670 CACNB1Q02641 598 aaPredicted RBP14.18□□□□□ -0.14
GYPB-201ENST00000429670 DCAF8L1A6NGE4 600 aa13.95□□□□□ -0.18
GYPB-201ENST00000429670 HOXD11P31277 338 aaPredicted RBP13.84□□□□□ -0.19
GYPB-201ENST00000429670 PPP4R3CPQ6ZMV5 832 aa13.83□□□□□ -0.2
GYPB-201ENST00000429670 RNF39Q9H2S5 420 aa13.79□□□□□ -0.2
GYPB-201ENST00000429670 CNKSR2Q8WXI2 1034 aa13.7□□□□□ -0.22
GYPB-201ENST00000429670 RNF216Q9NWF9 866 aaPredicted RBP13.67□□□□□ -0.22
GYPB-201ENST00000429670 C1QBPQ07021 282 aaKnown RBP13.65□□□□□ -0.22
GYPB-201ENST00000429670 DNAJC5BQ9UF47 199 aa13.53□□□□□ -0.24
GYPB-201ENST00000429670 NCBP3Q53F19 620 aaKnown RBP13.29□□□□□ -0.28
GYPB-201ENST00000429670 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.23□□□□□ -0.29
GYPB-201ENST00000429670 NPM3O75607 178 aaKnown RBP12.97□□□□□ -0.33
GYPB-201ENST00000429670 POTEHQ6S545 545 aa12.83□□□□□ -0.36
GYPB-201ENST00000429670 U3KPZ7 1027 aaPredicted RBP12.82□□□□□ -0.36
GYPB-201ENST00000429670 CAPN15O75808 1086 aa12.8□□□□□ -0.36
GYPB-201ENST00000429670 DSG3P32926 999 aa12.79□□□□□ -0.36
GYPB-201ENST00000429670 SPINK5Q9NQ38 1064 aaPredicted RBP12.73□□□□□ -0.37
GYPB-201ENST00000429670 APLP2Q06481 763 aa12.61□□□□□ -0.39
GYPB-201ENST00000429670 ZNF219Q9P2Y4 722 aaPredicted RBP12.51□□□□□ -0.41
GYPB-201ENST00000429670 TRHP20396 242 aaPredicted RBP12.5□□□□□ -0.41
GYPB-201ENST00000429670 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.49□□□□□ -0.41
GYPB-201ENST00000429670 HNRNPUL2Q1KMD3 747 aaKnown RBP12.49□□□□□ -0.41
GYPB-201ENST00000429670 SLC4A2P04920 1241 aa12.46□□□□□ -0.41
GYPB-201ENST00000429670 ABCB7O75027 752 aa12.41□□□□□ -0.42
GYPB-201ENST00000429670 KCNA4P22459 653 aa12.36□□□□□ -0.43
GYPB-201ENST00000429670 SAMD1Q6SPF0 538 aaPredicted RBP12.36□□□□□ -0.43
GYPB-201ENST00000429670 RBM42Q9BTD8 480 aaKnown RBP12.3□□□□□ -0.44
GYPB-201ENST00000429670 CHRDL2Q6WN34 429 aa12.11□□□□□ -0.47
GYPB-201ENST00000429670 POLA2Q14181 598 aa12.09□□□□□ -0.47
GYPB-201ENST00000429670 MYCNP04198 464 aaPredicted RBP12.06□□□□□ -0.48
GYPB-201ENST00000429670 AKT1S1Q96B36 256 aa11.92□□□□□ -0.5
GYPB-201ENST00000429670 ZBTB12Q9Y330 459 aaPredicted RBP11.89□□□□□ -0.51
GYPB-201ENST00000429670 SP7Q8TDD2 431 aaPredicted RBP11.86□□□□□ -0.51
GYPB-201ENST00000429670 REM2Q8IYK8 340 aaPredicted RBP11.76□□□□□ -0.53
GYPB-201ENST00000429670 PIP4P2Q8N4L2 257 aa11.72□□□□□ -0.53
GYPB-201ENST00000429670 FOXD4L1Q9NU39 408 aa11.71□□□□□ -0.53
GYPB-201ENST00000429670 ATF5Q9Y2D1 282 aaPredicted RBP11.7□□□□□ -0.54
GYPB-201ENST00000429670 HAX1O00165 279 aa11.67□□□□□ -0.54
GYPB-201ENST00000429670 OSCARQ8IYS5 282 aa11.65□□□□□ -0.54
GYPB-201ENST00000429670 SLC4A1APQ9BWU0 796 aaKnown RBP11.65□□□□□ -0.54
GYPB-201ENST00000429670 FXR2P51116 673 aaKnown RBP eCLIP11.62□□□□□ -0.55
GYPB-201ENST00000429670 PITPNM1O00562 1244 aa11.6□□□□□ -0.55
GYPB-201ENST00000429670 ATXN8OSP0DMR3 200 aa11.46□□□□□ -0.57
GYPB-201ENST00000429670 SPDYE2BA6NHP3 402 aa11.45□□□□□ -0.58
GYPB-201ENST00000429670 SPDYE6P0CI01 402 aa11.45□□□□□ -0.58
GYPB-201ENST00000429670 SPDYE2Q495Y8 402 aa11.45□□□□□ -0.58
GYPB-201ENST00000429670 FBLN2P98095 1184 aa11.43□□□□□ -0.58
GYPB-201ENST00000429670 EVX2Q03828 476 aa11.38□□□□□ -0.59
GYPB-201ENST00000429670 SPDYE1Q8NFV5 336 aaPredicted RBP11.36□□□□□ -0.59
GYPB-201ENST00000429670 PRKAR2AP13861 404 aaKnown RBP11.33□□□□□ -0.6
GYPB-201ENST00000429670 CLEC11AQ9Y240 323 aa11.32□□□□□ -0.6
GYPB-201ENST00000429670 ZBTB22O15209 634 aa11.29□□□□□ -0.6
GYPB-201ENST00000429670 C19orf67A6NJJ6 358 aa11.26□□□□□ -0.61
GYPB-201ENST00000429670 ZNF692Q9BU19 519 aaPredicted RBP11.26□□□□□ -0.61
GYPB-201ENST00000429670 SSUH2Q9Y2M2 353 aa11.2□□□□□ -0.62
GYPB-201ENST00000429670 GABBR2O75899 941 aa11.18□□□□□ -0.62
GYPB-201ENST00000429670 MKRN4PQ13434 485 aaPredicted RBP11.15□□□□□ -0.62
GYPB-201ENST00000429670 LHX8Q68G74 356 aa11.14□□□□□ -0.63
GYPB-201ENST00000429670 PRR29P0C7W0 189 aa11.12□□□□□ -0.63
GYPB-201ENST00000429670 CHADLQ6NUI6 762 aa11.07□□□□□ -0.64
GYPB-201ENST00000429670 PABPN1Q86U42 306 aaKnown RBP eCLIP11.04□□□□□ -0.64
GYPB-201ENST00000429670 CLCN6P51797 869 aa11.03□□□□□ -0.64
GYPB-201ENST00000429670 CD44P16070 742 aaKnown RBP10.95□□□□□ -0.66
GYPB-201ENST00000429670 FARP1Q9Y4F1 1045 aaPredicted RBP10.94□□□□□ -0.66
GYPB-201ENST00000429670 POTEIP0CG38 1075 aa10.87□□□□□ -0.67
GYPB-201ENST00000429670 DCBLD2Q96PD2 775 aa10.86□□□□□ -0.67
GYPB-201ENST00000429670 ZNF579Q8NAF0 562 aaKnown RBP10.77□□□□□ -0.69
GYPB-201ENST00000429670 STAG3Q9UJ98 1225 aa10.77□□□□□ -0.69
GYPB-201ENST00000429670 ZRANB1Q9UGI0 708 aa10.76□□□□□ -0.69
GYPB-201ENST00000429670 PLSCR2Q9NRY7 297 aa10.71□□□□□ -0.69
GYPB-201ENST00000429670 CREBZFQ9NS37 354 aa10.68□□□□□ -0.7
GYPB-201ENST00000429670 PAK3O75914 559 aaPredicted RBP10.67□□□□□ -0.7
GYPB-201ENST00000429670 GALR2O43603 387 aaPredicted RBP10.61□□□□□ -0.71
GYPB-201ENST00000429670 NPM1P06748 294 aaKnown RBP eCLIP10.59□□□□□ -0.71
GYPB-201ENST00000429670 OTUD5Q96G74 571 aa10.58□□□□□ -0.72
GYPB-201ENST00000429670 SPDYE4A6NLX3 237 aa10.52□□□□□ -0.73
GYPB-201ENST00000429670 CSRNP3Q8WYN3 585 aa10.51□□□□□ -0.73
GYPB-201ENST00000429670 PHF12Q96QT6 1004 aa10.51□□□□□ -0.73
GYPB-201ENST00000429670 POTEB2H3BUK9 544 aa10.5□□□□□ -0.73
GYPB-201ENST00000429670 POTEMA6NI47 508 aa10.47□□□□□ -0.73
GYPB-201ENST00000429670 PCDH10Q9P2E7 1040 aa10.47□□□□□ -0.73
GYPB-201ENST00000429670 C7P10643 843 aa10.44□□□□□ -0.74
GYPB-201ENST00000429670 PELP1Q8IZL8 1130 aaKnown RBP10.44□□□□□ -0.74
GYPB-201ENST00000429670 POTEGQ6S5H5 508 aa10.43□□□□□ -0.74
GYPB-201ENST00000429670 MAMSTRQ6ZN01 415 aa10.43□□□□□ -0.74
GYPB-201ENST00000429670 SLC39A7Q92504 469 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms