RNA–Protein interactions for RNA: ENST00000404898.5

CACNA1I-203, Transcript of calcium voltage-gated channel subunit alpha1 I, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1I, Length 9,892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1I-203ENST00000404898 PRUNE2Q8WUY3 3088 aa8.3□□□□□ -1.08
CACNA1I-203ENST00000404898 ZANQ9Y493 2812 aa8.3□□□□□ -1.08
CACNA1I-203ENST00000404898 Q6ZRN7 208 aaPredicted RBP8.3□□□□□ -1.08
CACNA1I-203ENST00000404898 KRTAP10-1P60331 282 aa8.29□□□□□ -1.08
CACNA1I-203ENST00000404898 DMXL2Q8TDJ6 3036 aa8.27□□□□□ -1.09
CACNA1I-203ENST00000404898 UTRNP46939 3433 aa8.26□□□□□ -1.09
CACNA1I-203ENST00000404898 WDFY4Q6ZS81 3184 aa8.23□□□□□ -1.09
CACNA1I-203ENST00000404898 TENM4Q6N022 2769 aa8.22□□□□□ -1.09
CACNA1I-203ENST00000404898 KRTAP13-1Q8IUC0 172 aa8.21□□□□□ -1.1
CACNA1I-203ENST00000404898 KRTAP10-2P60368 255 aa8.18□□□□□ -1.1
CACNA1I-203ENST00000404898 VWFP04275 2813 aa8.15□□□□□ -1.11
CACNA1I-203ENST00000404898 H0YAA0 97 aa8.1□□□□□ -1.11
CACNA1I-203ENST00000404898 PRO2289Q9P1D8 64 aa8.1□□□□□ -1.11
CACNA1I-203ENST00000404898 FBN2P35556 2912 aa8.07□□□□□ -1.12
CACNA1I-203ENST00000404898 RANBP2P49792 3224 aaKnown RBP8.06□□□□□ -1.12
CACNA1I-203ENST00000404898 TENM2Q9NT68 2774 aa8.05□□□□□ -1.12
CACNA1I-203ENST00000404898 PKD1L1Q8TDX9 2849 aa8.05□□□□□ -1.12
CACNA1I-203ENST00000404898 LAMA1P25391 3075 aa8.04□□□□□ -1.12
CACNA1I-203ENST00000404898 MXRA5Q9NR99 2828 aa8.03□□□□□ -1.12
CACNA1I-203ENST00000404898 KRTAP13-2Q52LG2 175 aa8.03□□□□□ -1.12
CACNA1I-203ENST00000404898 FREM2Q5SZK8 3169 aa8.02□□□□□ -1.13
CACNA1I-203ENST00000404898 HTTP42858 3142 aa7.94□□□□□ -1.14
CACNA1I-203ENST00000404898 XIRP2A4UGR9 3374 aa7.93□□□□□ -1.14
CACNA1I-203ENST00000404898 CELSR1Q9NYQ6 3014 aa7.93□□□□□ -1.14
CACNA1I-203ENST00000404898 COL7A1Q02388 2944 aa7.89□□□□□ -1.15
CACNA1I-203ENST00000404898 HRNRQ86YZ3 2850 aaPredicted RBP7.89□□□□□ -1.15
CACNA1I-203ENST00000404898 KRTAP10-8P60410 259 aa7.88□□□□□ -1.15
CACNA1I-203ENST00000404898 KRTAP7-1Q8IUC3 87 aa7.87□□□□□ -1.15
CACNA1I-203ENST00000404898 MKI67P46013 3256 aaKnown RBP7.86□□□□□ -1.15
CACNA1I-203ENST00000404898 BOD1L1Q8NFC6 3051 aa7.85□□□□□ -1.15
CACNA1I-203ENST00000404898 DMXL1Q9Y485 3027 aa7.84□□□□□ -1.15
CACNA1I-203ENST00000404898 ATMQ13315 3056 aa7.84□□□□□ -1.15
CACNA1I-203ENST00000404898 LAMA3Q16787 3333 aa7.8□□□□□ -1.16
CACNA1I-203ENST00000404898 TPRXLQ17RH7 258 aa7.8□□□□□ -1.16
CACNA1I-203ENST00000404898 REV3LO60673 3130 aa7.77□□□□□ -1.16
CACNA1I-203ENST00000404898 USP34Q70CQ2 3546 aa7.76□□□□□ -1.17
CACNA1I-203ENST00000404898 XP32Q5T750 250 aa7.75□□□□□ -1.17
CACNA1I-203ENST00000404898 INE1O15225 51 aa7.75□□□□□ -1.17
CACNA1I-203ENST00000404898 ADGRG4Q8IZF6 3080 aa7.74□□□□□ -1.17
CACNA1I-203ENST00000404898 UNC80Q8N2C7 3258 aa7.7□□□□□ -1.18
CACNA1I-203ENST00000404898 BRCA2P51587 3418 aa7.68□□□□□ -1.18
CACNA1I-203ENST00000404898 KRTAP13-4Q3LI77 160 aa7.68□□□□□ -1.18
CACNA1I-203ENST00000404898 COL6A3P12111 3177 aa7.62□□□□□ -1.19
CACNA1I-203ENST00000404898 MEGF8Q7Z7M0 2845 aa7.62□□□□□ -1.19
CACNA1I-203ENST00000404898 KRTAP1-4P0C5Y4 121 aa7.56□□□□□ -1.2
CACNA1I-203ENST00000404898 CELSR3Q9NYQ7 3312 aa7.56□□□□□ -1.2
CACNA1I-203ENST00000404898 KRTAP13-3Q3SY46 172 aa7.48□□□□□ -1.21
CACNA1I-203ENST00000404898 KRTAP21-3Q3LHN1 58 aa7.48□□□□□ -1.21
CACNA1I-203ENST00000404898 KRTAP10-10P60014 251 aa7.46□□□□□ -1.21
CACNA1I-203ENST00000404898 KRTAP12-2P59991 146 aa7.43□□□□□ -1.22
CACNA1I-203ENST00000404898 ZFHX3Q15911 3703 aa7.41□□□□□ -1.22
CACNA1I-203ENST00000404898 DNAH14Q0VDD8 3507 aa7.41□□□□□ -1.22
CACNA1I-203ENST00000404898 CDH23Q9H251 3354 aa7.4□□□□□ -1.23
CACNA1I-203ENST00000404898 FBN3Q75N90 2809 aa7.39□□□□□ -1.23
CACNA1I-203ENST00000404898 CFAP47Q6ZTR5 3102 aa7.36□□□□□ -1.23
CACNA1I-203ENST00000404898 KRTAP12-1P59990 96 aa7.33□□□□□ -1.24
CACNA1I-203ENST00000404898 FBN1P35555 2871 aaKnown RBP7.31□□□□□ -1.24
CACNA1I-203ENST00000404898 VCANP13611 3396 aa7.29□□□□□ -1.24
CACNA1I-203ENST00000404898 OTOGQ6ZRI0 2925 aa7.23□□□□□ -1.25
CACNA1I-203ENST00000404898 KRTAP15-1Q3LI76 137 aa7.23□□□□□ -1.25
CACNA1I-203ENST00000404898 SPEGQ15772 3267 aa7.22□□□□□ -1.25
CACNA1I-203ENST00000404898 A0A1B0GVY2 172 aa7.21□□□□□ -1.26
CACNA1I-203ENST00000404898 SPTBN5Q9NRC6 3674 aaKnown RBP7.2□□□□□ -1.26
CACNA1I-203ENST00000404898 SZT2Q5T011 3432 aa7.16□□□□□ -1.26
CACNA1I-203ENST00000404898 KRTAP23-1A1A580 65 aa7.14□□□□□ -1.27
CACNA1I-203ENST00000404898 MYO15AQ9UKN7 3530 aa7.09□□□□□ -1.28
CACNA1I-203ENST00000404898 EYSQ5T1H1 3165 aa7.07□□□□□ -1.28
CACNA1I-203ENST00000404898 ZFHX4Q86UP3 3567 aa7□□□□□ -1.29
CACNA1I-203ENST00000404898 NBPF19A0A087WUL8 3843 aa6.94□□□□□ -1.3
CACNA1I-203ENST00000404898 KRTAP10-6P60371 365 aaPredicted RBP6.9□□□□□ -1.3
CACNA1I-203ENST00000404898 SPENQ96T58 3664 aaKnown RBP6.9□□□□□ -1.3
CACNA1I-203ENST00000404898 WDFY3Q8IZQ1 3526 aa6.84□□□□□ -1.31
CACNA1I-203ENST00000404898 KRTAP10-12P60413 245 aa6.83□□□□□ -1.32
CACNA1I-203ENST00000404898 LOC400499M0QZD8 3231 aa6.82□□□□□ -1.32
CACNA1I-203ENST00000404898 KRTAP3-1Q9BYR8 98 aa6.82□□□□□ -1.32
CACNA1I-203ENST00000404898 DMDP11532 3685 aa6.74□□□□□ -1.33
CACNA1I-203ENST00000404898 SMG1Q96Q15 3661 aaKnown RBP6.73□□□□□ -1.33
CACNA1I-203ENST00000404898 AKAP9Q99996 3911 aa6.72□□□□□ -1.33
CACNA1I-203ENST00000404898 KRTAP12-3P60328 96 aa6.63□□□□□ -1.35
CACNA1I-203ENST00000404898 TRRAPQ9Y4A5 3859 aa6.63□□□□□ -1.35
CACNA1I-203ENST00000404898 RELNP78509 3460 aa6.62□□□□□ -1.35
CACNA1I-203ENST00000404898 ASPMQ8IZT6 3477 aa6.58□□□□□ -1.36
CACNA1I-203ENST00000404898 DCHS1Q96JQ0 3298 aa6.57□□□□□ -1.36
CACNA1I-203ENST00000404898 LAMA5O15230 3695 aa6.57□□□□□ -1.36
CACNA1I-203ENST00000404898 KRTAP3-2Q9BYR7 98 aa6.54□□□□□ -1.36
CACNA1I-203ENST00000404898 VPS13CQ709C8 3753 aa6.52□□□□□ -1.37
CACNA1I-203ENST00000404898 KRTAP3-3Q9BYR6 98 aa6.44□□□□□ -1.38
CACNA1I-203ENST00000404898 ALMS1Q8TCU4 4167 aa6.44□□□□□ -1.38
CACNA1I-203ENST00000404898 CSMD1Q96PZ7 3565 aa6.36□□□□□ -1.39
CACNA1I-203ENST00000404898 BSNQ9UPA5 3926 aa6.35□□□□□ -1.39
CACNA1I-203ENST00000404898 KRTAP19-4Q3LI73 84 aa6.32□□□□□ -1.4
CACNA1I-203ENST00000404898 LCE3AQ5TA76 89 aa6.24□□□□□ -1.41
CACNA1I-203ENST00000404898 CRCT1Q9UGL9 99 aa6.22□□□□□ -1.41
CACNA1I-203ENST00000404898 KRTAP10-5P60370 271 aa6.2□□□□□ -1.42
CACNA1I-203ENST00000404898 MUC3AQ02505 3323 aa6.17□□□□□ -1.42
CACNA1I-203ENST00000404898 CSMD3Q7Z407 3707 aa6.16□□□□□ -1.42
CACNA1I-203ENST00000404898 DNAH3Q8TD57 4116 aa6.16□□□□□ -1.42
CACNA1I-203ENST00000404898 SVEP1Q4LDE5 3571 aa6.14□□□□□ -1.43
CACNA1I-203ENST00000404898 LYSTQ99698 3801 aa6.13□□□□□ -1.43
CACNA1I-203ENST00000404898 CMYA5Q8N3K9 4069 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms