RNA–Protein interactions for RNA: ENST00000361354.8

NCKAP1-202, Transcript of NCK associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCKAP1, Length 20,347 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-202ENST00000361354 WDFY4Q6ZS81 3184 aa4.76□□□□□ -1.65
NCKAP1-202ENST00000361354 KRTAP1-5Q9BYS1 174 aa4.76□□□□□ -1.65
NCKAP1-202ENST00000361354 KRTAP10-1P60331 282 aa4.76□□□□□ -1.65
NCKAP1-202ENST00000361354 NBEAQ8NFP9 2946 aa4.75□□□□□ -1.65
NCKAP1-202ENST00000361354 KRTAP1-1Q07627 177 aa4.75□□□□□ -1.65
NCKAP1-202ENST00000361354 DCHS2Q6V1P9 2916 aa4.74□□□□□ -1.65
NCKAP1-202ENST00000361354 ZZEF1O43149 2961 aa4.73□□□□□ -1.65
NCKAP1-202ENST00000361354 VWFP04275 2813 aa4.73□□□□□ -1.65
NCKAP1-202ENST00000361354 KRTAP10-2P60368 255 aa4.73□□□□□ -1.65
NCKAP1-202ENST00000361354 REV3LO60673 3130 aa4.71□□□□□ -1.66
NCKAP1-202ENST00000361354 RANBP2P49792 3224 aaKnown RBP4.71□□□□□ -1.66
NCKAP1-202ENST00000361354 PKD1L1Q8TDX9 2849 aa4.68□□□□□ -1.66
NCKAP1-202ENST00000361354 TENM4Q6N022 2769 aa4.66□□□□□ -1.66
NCKAP1-202ENST00000361354 CELSR1Q9NYQ6 3014 aa4.65□□□□□ -1.67
NCKAP1-202ENST00000361354 XIRP2A4UGR9 3374 aa4.64□□□□□ -1.67
NCKAP1-202ENST00000361354 KRTAP10-8P60410 259 aa4.64□□□□□ -1.67
NCKAP1-202ENST00000361354 Q6ZRN7 208 aaPredicted RBP4.64□□□□□ -1.67
NCKAP1-202ENST00000361354 ZANQ9Y493 2812 aa4.63□□□□□ -1.67
NCKAP1-202ENST00000361354 TENM2Q9NT68 2774 aa4.62□□□□□ -1.67
NCKAP1-202ENST00000361354 HTTP42858 3142 aa4.6□□□□□ -1.67
NCKAP1-202ENST00000361354 ATMQ13315 3056 aa4.6□□□□□ -1.67
NCKAP1-202ENST00000361354 ADGRG4Q8IZF6 3080 aa4.6□□□□□ -1.67
NCKAP1-202ENST00000361354 PRO2289Q9P1D8 64 aa4.6□□□□□ -1.67
NCKAP1-202ENST00000361354 H0YAA0 97 aa4.59□□□□□ -1.67
NCKAP1-202ENST00000361354 DMXL1Q9Y485 3027 aa4.59□□□□□ -1.67
NCKAP1-202ENST00000361354 BOD1L1Q8NFC6 3051 aa4.59□□□□□ -1.68
NCKAP1-202ENST00000361354 CELSR3Q9NYQ7 3312 aa4.56□□□□□ -1.68
NCKAP1-202ENST00000361354 FBN2P35556 2912 aa4.55□□□□□ -1.68
NCKAP1-202ENST00000361354 KRTAP13-2Q52LG2 175 aa4.54□□□□□ -1.68
NCKAP1-202ENST00000361354 MKI67P46013 3256 aaKnown RBP4.54□□□□□ -1.68
NCKAP1-202ENST00000361354 COL7A1Q02388 2944 aa4.52□□□□□ -1.69
NCKAP1-202ENST00000361354 KRTAP13-1Q8IUC0 172 aa4.5□□□□□ -1.69
NCKAP1-202ENST00000361354 UNC80Q8N2C7 3258 aa4.5□□□□□ -1.69
NCKAP1-202ENST00000361354 COL6A3P12111 3177 aa4.49□□□□□ -1.69
NCKAP1-202ENST00000361354 MXRA5Q9NR99 2828 aa4.48□□□□□ -1.69
NCKAP1-202ENST00000361354 DNAH14Q0VDD8 3507 aa4.4□□□□□ -1.7
NCKAP1-202ENST00000361354 XP32Q5T750 250 aa4.4□□□□□ -1.71
NCKAP1-202ENST00000361354 KRTAP7-1Q8IUC3 87 aa4.39□□□□□ -1.71
NCKAP1-202ENST00000361354 KRTAP10-10P60014 251 aa4.38□□□□□ -1.71
NCKAP1-202ENST00000361354 CFAP47Q6ZTR5 3102 aa4.36□□□□□ -1.71
NCKAP1-202ENST00000361354 A0A1B0GVY2 172 aa4.36□□□□□ -1.71
NCKAP1-202ENST00000361354 TPRXLQ17RH7 258 aa4.35□□□□□ -1.71
NCKAP1-202ENST00000361354 KRTAP12-2P59991 146 aa4.34□□□□□ -1.71
NCKAP1-202ENST00000361354 SPEGQ15772 3267 aa4.33□□□□□ -1.72
NCKAP1-202ENST00000361354 VCANP13611 3396 aa4.33□□□□□ -1.72
NCKAP1-202ENST00000361354 USP34Q70CQ2 3546 aa4.33□□□□□ -1.72
NCKAP1-202ENST00000361354 MEGF8Q7Z7M0 2845 aa4.32□□□□□ -1.72
NCKAP1-202ENST00000361354 KRTAP13-4Q3LI77 160 aa4.31□□□□□ -1.72
NCKAP1-202ENST00000361354 INE1O15225 51 aa4.31□□□□□ -1.72
NCKAP1-202ENST00000361354 HRNRQ86YZ3 2850 aaPredicted RBP4.31□□□□□ -1.72
NCKAP1-202ENST00000361354 LAMA3Q16787 3333 aa4.3□□□□□ -1.72
NCKAP1-202ENST00000361354 OTOGQ6ZRI0 2925 aa4.24□□□□□ -1.73
NCKAP1-202ENST00000361354 ZFHX3Q15911 3703 aa4.22□□□□□ -1.73
NCKAP1-202ENST00000361354 KRTAP1-4P0C5Y4 121 aa4.22□□□□□ -1.73
NCKAP1-202ENST00000361354 KRTAP15-1Q3LI76 137 aa4.22□□□□□ -1.73
NCKAP1-202ENST00000361354 WDFY3Q8IZQ1 3526 aa4.21□□□□□ -1.74
NCKAP1-202ENST00000361354 SPTBN5Q9NRC6 3674 aaKnown RBP4.21□□□□□ -1.74
NCKAP1-202ENST00000361354 SZT2Q5T011 3432 aa4.2□□□□□ -1.74
NCKAP1-202ENST00000361354 ZFHX4Q86UP3 3567 aa4.18□□□□□ -1.74
NCKAP1-202ENST00000361354 FBN3Q75N90 2809 aa4.18□□□□□ -1.74
NCKAP1-202ENST00000361354 FBN1P35555 2871 aaKnown RBP4.17□□□□□ -1.74
NCKAP1-202ENST00000361354 BRCA2P51587 3418 aa4.16□□□□□ -1.74
NCKAP1-202ENST00000361354 KRTAP13-3Q3SY46 172 aa4.16□□□□□ -1.74
NCKAP1-202ENST00000361354 KRTAP12-1P59990 96 aa4.13□□□□□ -1.75
NCKAP1-202ENST00000361354 MYO15AQ9UKN7 3530 aa4.12□□□□□ -1.75
NCKAP1-202ENST00000361354 LOC400499M0QZD8 3231 aa4.11□□□□□ -1.75
NCKAP1-202ENST00000361354 CDH23Q9H251 3354 aa4.11□□□□□ -1.75
NCKAP1-202ENST00000361354 NBPF19A0A087WUL8 3843 aa4.08□□□□□ -1.76
NCKAP1-202ENST00000361354 EYSQ5T1H1 3165 aa4.08□□□□□ -1.76
NCKAP1-202ENST00000361354 LAMA5O15230 3695 aa4.07□□□□□ -1.76
NCKAP1-202ENST00000361354 KRTAP21-3Q3LHN1 58 aa3.99□□□□□ -1.77
NCKAP1-202ENST00000361354 ASPMQ8IZT6 3477 aa3.98□□□□□ -1.77
NCKAP1-202ENST00000361354 SMG1Q96Q15 3661 aaKnown RBP3.98□□□□□ -1.77
NCKAP1-202ENST00000361354 DCHS1Q96JQ0 3298 aa3.95□□□□□ -1.78
NCKAP1-202ENST00000361354 DMDP11532 3685 aa3.94□□□□□ -1.78
NCKAP1-202ENST00000361354 SPENQ96T58 3664 aaKnown RBP3.94□□□□□ -1.78
NCKAP1-202ENST00000361354 KRTAP10-12P60413 245 aa3.92□□□□□ -1.78
NCKAP1-202ENST00000361354 CSMD1Q96PZ7 3565 aa3.92□□□□□ -1.78
NCKAP1-202ENST00000361354 AKAP9Q99996 3911 aa3.89□□□□□ -1.79
NCKAP1-202ENST00000361354 CRCT1Q9UGL9 99 aa3.88□□□□□ -1.79
NCKAP1-202ENST00000361354 KRTAP10-6P60371 365 aaPredicted RBP3.83□□□□□ -1.8
NCKAP1-202ENST00000361354 TRRAPQ9Y4A5 3859 aa3.82□□□□□ -1.8
NCKAP1-202ENST00000361354 KRTAP23-1A1A580 65 aa3.81□□□□□ -1.8
NCKAP1-202ENST00000361354 RELNP78509 3460 aa3.79□□□□□ -1.8
NCKAP1-202ENST00000361354 VPS13CQ709C8 3753 aa3.79□□□□□ -1.8
NCKAP1-202ENST00000361354 KRTAP3-1Q9BYR8 98 aa3.79□□□□□ -1.8
NCKAP1-202ENST00000361354 KRTAP12-3P60328 96 aa3.77□□□□□ -1.81
NCKAP1-202ENST00000361354 KRTAP10-5P60370 271 aa3.71□□□□□ -1.82
NCKAP1-202ENST00000361354 CSMD3Q7Z407 3707 aa3.68□□□□□ -1.82
NCKAP1-202ENST00000361354 CUBNO60494 3623 aa3.62□□□□□ -1.83
NCKAP1-202ENST00000361354 LCE3AQ5TA76 89 aa3.62□□□□□ -1.83
NCKAP1-202ENST00000361354 LYSTQ99698 3801 aa3.61□□□□□ -1.83
NCKAP1-202ENST00000361354 BSNQ9UPA5 3926 aa3.61□□□□□ -1.83
NCKAP1-202ENST00000361354 KRTAP3-2Q9BYR7 98 aa3.61□□□□□ -1.83
NCKAP1-202ENST00000361354 ALMS1Q8TCU4 4167 aa3.61□□□□□ -1.83
NCKAP1-202ENST00000361354 KRTAP3-3Q9BYR6 98 aa3.56□□□□□ -1.84
NCKAP1-202ENST00000361354 MUC3AQ02505 3323 aa3.55□□□□□ -1.84
NCKAP1-202ENST00000361354 SVEP1Q4LDE5 3571 aa3.54□□□□□ -1.84
NCKAP1-202ENST00000361354 DNAH3Q8TD57 4116 aa3.51□□□□□ -1.85
NCKAP1-202ENST00000361354 KRTAP8-1Q8IUC2 63 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms