RNA–Protein interactions for RNA: ENST00000357798.9

NPAS3-203, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-203ENST00000357798 PSORS1C2Q9UIG4 136 aa14.04□□□□□ -0.16
NPAS3-203ENST00000357798 MDFIQ99750 246 aa14.03□□□□□ -0.16
NPAS3-203ENST00000357798 C7orf65Q6ZTY9 151 aa14.02□□□□□ -0.16
NPAS3-203ENST00000357798 STAB2Q8WWQ8 2551 aa14.01□□□□□ -0.17
NPAS3-203ENST00000357798 ZNF861PO60384 105 aa14□□□□□ -0.17
NPAS3-203ENST00000357798 Q5W150 140 aa14□□□□□ -0.17
NPAS3-203ENST00000357798 ANAPC11Q9NYG5 84 aa14□□□□□ -0.17
NPAS3-203ENST00000357798 PRR26Q8N8Z3 221 aa13.98□□□□□ -0.17
NPAS3-203ENST00000357798 COL7A1Q02388 2944 aa13.96□□□□□ -0.18
NPAS3-203ENST00000357798 ACYP2P14621 99 aa13.95□□□□□ -0.18
NPAS3-203ENST00000357798 DNAH7Q8WXX0 4024 aa13.95□□□□□ -0.18
NPAS3-203ENST00000357798 A0A087WTM6 91 aa13.94□□□□□ -0.18
NPAS3-203ENST00000357798 SPINK6Q6UWN8 80 aa13.93□□□□□ -0.18
NPAS3-203ENST00000357798 NUPR2A6NF83 97 aa13.91□□□□□ -0.18
NPAS3-203ENST00000357798 ALMS1Q8TCU4 4167 aa13.9□□□□□ -0.18
NPAS3-203ENST00000357798 CSMD3Q7Z407 3707 aa13.9□□□□□ -0.18
NPAS3-203ENST00000357798 C8orf87E5RJ46 101 aa13.9□□□□□ -0.18
NPAS3-203ENST00000357798 RTL8CO15255 209 aa13.88□□□□□ -0.19
NPAS3-203ENST00000357798 DMAC1Q96GE9 116 aa13.87□□□□□ -0.19
NPAS3-203ENST00000357798 PLECQ15149 4684 aaKnown RBP13.86□□□□□ -0.19
NPAS3-203ENST00000357798 DNAH8Q96JB1 4490 aa13.86□□□□□ -0.19
NPAS3-203ENST00000357798 CIRBP-AS1Q8TBR5 109 aa13.81□□□□□ -0.2
NPAS3-203ENST00000357798 HECTD4Q9Y4D8 3996 aa13.78□□□□□ -0.2
NPAS3-203ENST00000357798 IGLV7-43P04211 117 aa13.77□□□□□ -0.2
NPAS3-203ENST00000357798 FAM229AH3BQW9 127 aa13.77□□□□□ -0.21
NPAS3-203ENST00000357798 SSBP3-AS1Q7Z2R9 100 aa13.76□□□□□ -0.21
NPAS3-203ENST00000357798 MGAM2Q2M2H8 2515 aa13.76□□□□□ -0.21
NPAS3-203ENST00000357798 DNHD1Q96M86 4753 aa13.75□□□□□ -0.21
NPAS3-203ENST00000357798 VPS13DQ5THJ4 4388 aa13.75□□□□□ -0.21
NPAS3-203ENST00000357798 LINC00313P59037 77 aa13.71□□□□□ -0.21
NPAS3-203ENST00000357798 FRAS1Q86XX4 4008 aa13.71□□□□□ -0.22
NPAS3-203ENST00000357798 A0A1B0GU69 56 aa13.7□□□□□ -0.22
NPAS3-203ENST00000357798 IGKV2-30P06310 120 aa13.7□□□□□ -0.22
NPAS3-203ENST00000357798 DNAH17Q9UFH2 4485 aa13.7□□□□□ -0.22
NPAS3-203ENST00000357798 SPATA8Q6RVD6 105 aa13.65□□□□□ -0.22
NPAS3-203ENST00000357798 RETNLBQ9BQ08 111 aa13.6□□□□□ -0.23
NPAS3-203ENST00000357798 PLA2G1BP04054 148 aaKnown RBP13.59□□□□□ -0.23
NPAS3-203ENST00000357798 STARD9Q9P2P6 4700 aa13.55□□□□□ -0.24
NPAS3-203ENST00000357798 KRTAP16-1A8MUX0 517 aa13.55□□□□□ -0.24
NPAS3-203ENST00000357798 PRAC1Q96KF2 57 aa13.53□□□□□ -0.24
NPAS3-203ENST00000357798 UQCR11O14957 56 aa13.53□□□□□ -0.24
NPAS3-203ENST00000357798 MIR22HGQ0VDD5 57 aa13.52□□□□□ -0.24
NPAS3-203ENST00000357798 PRKDCP78527 4128 aaKnown RBP13.5□□□□□ -0.25
NPAS3-203ENST00000357798 KRTAP13-2Q52LG2 175 aa13.48□□□□□ -0.25
NPAS3-203ENST00000357798 C1orf134Q5TEV5 83 aa13.48□□□□□ -0.25
NPAS3-203ENST00000357798 DNAH2Q9P225 4427 aa13.47□□□□□ -0.25
NPAS3-203ENST00000357798 FBN3Q75N90 2809 aa13.46□□□□□ -0.25
NPAS3-203ENST00000357798 ADM2Q7Z4H4 148 aa13.45□□□□□ -0.26
NPAS3-203ENST00000357798 IGKV2D-30A0A075B6S6 120 aa13.42□□□□□ -0.26
NPAS3-203ENST00000357798 KMT2AQ03164 3969 aa13.36□□□□□ -0.27
NPAS3-203ENST00000357798 MEGF8Q7Z7M0 2845 aa13.34□□□□□ -0.27
NPAS3-203ENST00000357798 LINC01554Q52M75 96 aa13.31□□□□□ -0.28
NPAS3-203ENST00000357798 DNAH11Q96DT5 4516 aa13.3□□□□□ -0.28
NPAS3-203ENST00000357798 KRTAP10-2P60368 255 aa13.25□□□□□ -0.29
NPAS3-203ENST00000357798 KRTAP1-4P0C5Y4 121 aa13.24□□□□□ -0.29
NPAS3-203ENST00000357798 DNAH5Q8TE73 4624 aa13.2□□□□□ -0.3
NPAS3-203ENST00000357798 TGP01266 2768 aa13.2□□□□□ -0.3
NPAS3-203ENST00000357798 Q6ZSA8 131 aa13.2□□□□□ -0.3
NPAS3-203ENST00000357798 DNAH6Q9C0G6 4158 aa13.18□□□□□ -0.3
NPAS3-203ENST00000357798 C4orf48Q5BLP8 95 aa13.17□□□□□ -0.3
NPAS3-203ENST00000357798 LY6G6CO95867 125 aa13.16□□□□□ -0.3
NPAS3-203ENST00000357798 SPINK1P00995 79 aa13.14□□□□□ -0.31
NPAS3-203ENST00000357798 Q8N1X5 172 aa13.12□□□□□ -0.31
NPAS3-203ENST00000357798 KRTAP10-1P60331 282 aa13.11□□□□□ -0.31
NPAS3-203ENST00000357798 CSAG1Q6PB30 78 aa13.11□□□□□ -0.31
NPAS3-203ENST00000357798 TYMSOSQ8TAI1 123 aa13.09□□□□□ -0.31
NPAS3-203ENST00000357798 LRP1BQ9NZR2 4599 aa13.04□□□□□ -0.32
NPAS3-203ENST00000357798 RPS29P62273 56 aaKnown RBP12.97□□□□□ -0.33
NPAS3-203ENST00000357798 H0YAA0 97 aa12.96□□□□□ -0.33
NPAS3-203ENST00000357798 PKD1P98161 4303 aa12.94□□□□□ -0.34
NPAS3-203ENST00000357798 A8MUU9 505 aa12.93□□□□□ -0.34
NPAS3-203ENST00000357798 LINC00304Q8N9R0 145 aa12.91□□□□□ -0.34
NPAS3-203ENST00000357798 VPS13BQ7Z7G8 4022 aa12.88□□□□□ -0.35
NPAS3-203ENST00000357798 A0A1B0GU33 70 aa12.85□□□□□ -0.35
NPAS3-203ENST00000357798 C20orf166-AS1Q96NR2 134 aa12.82□□□□□ -0.36
NPAS3-203ENST00000357798 H1FX-AS1Q4G0G2 97 aa12.81□□□□□ -0.36
NPAS3-203ENST00000357798 KRTAP3-1Q9BYR8 98 aa12.81□□□□□ -0.36
NPAS3-203ENST00000357798 FAT2Q9NYQ8 4349 aa12.77□□□□□ -0.36
NPAS3-203ENST00000357798 KRTAP25-1Q3LHN0 102 aa12.76□□□□□ -0.37
NPAS3-203ENST00000357798 SACSQ9NZJ4 4579 aa12.74□□□□□ -0.37
NPAS3-203ENST00000357798 C9orf92A6NGG3 77 aa12.71□□□□□ -0.38
NPAS3-203ENST00000357798 H3BS24 57 aa12.59□□□□□ -0.39
NPAS3-203ENST00000357798 HYDINQ4G0P3 5121 aa12.58□□□□□ -0.4
NPAS3-203ENST00000357798 K7ERS5 55 aa12.58□□□□□ -0.4
NPAS3-203ENST00000357798 COX6B2Q6YFQ2 88 aa12.56□□□□□ -0.4
NPAS3-203ENST00000357798 KRTAP21-3Q3LHN1 58 aa12.54□□□□□ -0.4
NPAS3-203ENST00000357798 PKHD1L1Q86WI1 4243 aa12.5□□□□□ -0.41
NPAS3-203ENST00000357798 ROMO1P60602 79 aa12.47□□□□□ -0.41
NPAS3-203ENST00000357798 SMR3BP02814 79 aaPredicted RBP12.41□□□□□ -0.42
NPAS3-203ENST00000357798 KRTAP10-4P60372 401 aaPredicted RBP12.35□□□□□ -0.43
NPAS3-203ENST00000357798 APOBP04114 4563 aaKnown RBP12.34□□□□□ -0.43
NPAS3-203ENST00000357798 PKHD1P08F94 4074 aa12.34□□□□□ -0.43
NPAS3-203ENST00000357798 CRIPTQ9P021 101 aa12.33□□□□□ -0.44
NPAS3-203ENST00000357798 RPL37P61927 97 aaKnown RBP12.3□□□□□ -0.44
NPAS3-203ENST00000357798 KRTAP10-6P60371 365 aaPredicted RBP12.29□□□□□ -0.44
NPAS3-203ENST00000357798 DYNC1H1Q14204 4646 aaKnown RBP12.27□□□□□ -0.45
NPAS3-203ENST00000357798 KMT2CQ8NEZ4 4911 aaKnown RBP12.27□□□□□ -0.45
NPAS3-203ENST00000357798 FLG2Q5D862 2391 aaPredicted RBP12.25□□□□□ -0.45
NPAS3-203ENST00000357798 KRTAP3-3Q9BYR6 98 aa12.24□□□□□ -0.45
NPAS3-203ENST00000357798 KRTAP13-4Q3LI77 160 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms