RNA–Protein interactions for RNA: ENST00000356175.7

NF1-201, Transcript of neurofibromin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NF1, Length 12,362 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-201ENST00000356175 KRTAP4-16G5E9R7 235 aaPredicted RBP4.11□□□□□ -1.75
NF1-201ENST00000356175 RPL37P61927 97 aaKnown RBP4.1□□□□□ -1.75
NF1-201ENST00000356175 COL7A1Q02388 2944 aa4.1□□□□□ -1.75
NF1-201ENST00000356175 S4R3F8 94 aa4.09□□□□□ -1.75
NF1-201ENST00000356175 J3QKU1 62 aa4.09□□□□□ -1.75
NF1-201ENST00000356175 A0A087X002 238 aa4.08□□□□□ -1.76
NF1-201ENST00000356175 NOTCH2NLQ7Z3S9 236 aa4.08□□□□□ -1.76
NF1-201ENST00000356175 LINC00472Q9H8W2 130 aa4.08□□□□□ -1.76
NF1-201ENST00000356175 KRTAP26-1Q6PEX3 210 aa4.08□□□□□ -1.76
NF1-201ENST00000356175 LAMA5O15230 3695 aa4.08□□□□□ -1.76
NF1-201ENST00000356175 TENM4Q6N022 2769 aa4.06□□□□□ -1.76
NF1-201ENST00000356175 MYO15AQ9UKN7 3530 aa4.06□□□□□ -1.76
NF1-201ENST00000356175 LOC400499M0QZD8 3231 aa4.05□□□□□ -1.76
NF1-201ENST00000356175 PLAC4Q8WY50 150 aa4.05□□□□□ -1.76
NF1-201ENST00000356175 USP34Q70CQ2 3546 aa4.05□□□□□ -1.76
NF1-201ENST00000356175 TENM2Q9NT68 2774 aa4.05□□□□□ -1.76
NF1-201ENST00000356175 NBDYA0A0U1RRE5 68 aa4.05□□□□□ -1.76
NF1-201ENST00000356175 PANO1I0J062 215 aa4.04□□□□□ -1.76
NF1-201ENST00000356175 COX6B2Q6YFQ2 88 aa4.04□□□□□ -1.76
NF1-201ENST00000356175 SMR3BP02814 79 aaPredicted RBP4.04□□□□□ -1.76
NF1-201ENST00000356175 FBN1P35555 2871 aaKnown RBP4.04□□□□□ -1.76
NF1-201ENST00000356175 ZFHX4Q86UP3 3567 aa4.03□□□□□ -1.76
NF1-201ENST00000356175 KRTAP29-1A8MX34 341 aaPredicted RBP4.03□□□□□ -1.76
NF1-201ENST00000356175 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.02□□□□□ -1.77
NF1-201ENST00000356175 CSMD1Q96PZ7 3565 aa4.01□□□□□ -1.77
NF1-201ENST00000356175 KRTAP10-11P60412 298 aa4.01□□□□□ -1.77
NF1-201ENST00000356175 SZT2Q5T011 3432 aa4.01□□□□□ -1.77
NF1-201ENST00000356175 SPEGQ15772 3267 aa4.01□□□□□ -1.77
NF1-201ENST00000356175 LCE6AA0A183 80 aa4□□□□□ -1.77
NF1-201ENST00000356175 KRTAP11-1Q8IUC1 163 aa4□□□□□ -1.77
NF1-201ENST00000356175 MEGF8Q7Z7M0 2845 aa4□□□□□ -1.77
NF1-201ENST00000356175 M0QZ58 72 aa3.99□□□□□ -1.77
NF1-201ENST00000356175 H3BNG1 76 aa3.97□□□□□ -1.77
NF1-201ENST00000356175 J3QL48 77 aa3.97□□□□□ -1.77
NF1-201ENST00000356175 H0YAA0 97 aa3.95□□□□□ -1.78
NF1-201ENST00000356175 VPS13CQ709C8 3753 aa3.94□□□□□ -1.78
NF1-201ENST00000356175 R4GN34 69 aa3.93□□□□□ -1.78
NF1-201ENST00000356175 TNP2Q05952 138 aa3.93□□□□□ -1.78
NF1-201ENST00000356175 KRTAP10-3P60369 221 aa3.92□□□□□ -1.78
NF1-201ENST00000356175 P0C880 135 aa3.91□□□□□ -1.78
NF1-201ENST00000356175 A0A087WTM6 91 aa3.91□□□□□ -1.78
NF1-201ENST00000356175 DCHS1Q96JQ0 3298 aa3.91□□□□□ -1.78
NF1-201ENST00000356175 EYSQ5T1H1 3165 aa3.91□□□□□ -1.78
NF1-201ENST00000356175 KRTAP24-1Q3LI83 254 aa3.9□□□□□ -1.78
NF1-201ENST00000356175 SPRR1AP35321 89 aa3.89□□□□□ -1.79
NF1-201ENST00000356175 FBN3Q75N90 2809 aa3.87□□□□□ -1.79
NF1-201ENST00000356175 Q6ZSA8 131 aa3.87□□□□□ -1.79
NF1-201ENST00000356175 RELNP78509 3460 aa3.85□□□□□ -1.79
NF1-201ENST00000356175 KRTAP10-8P60410 259 aa3.83□□□□□ -1.8
NF1-201ENST00000356175 PLAC8Q9NZF1 115 aa3.83□□□□□ -1.8
NF1-201ENST00000356175 KRTAP1-5Q9BYS1 174 aa3.82□□□□□ -1.8
NF1-201ENST00000356175 WWC2-AS2Q96NR7 200 aa3.82□□□□□ -1.8
NF1-201ENST00000356175 CUBNO60494 3623 aa3.8□□□□□ -1.8
NF1-201ENST00000356175 SPRR1BP22528 89 aa3.77□□□□□ -1.81
NF1-201ENST00000356175 AKAP9Q99996 3911 aa3.77□□□□□ -1.81
NF1-201ENST00000356175 TPRXLQ17RH7 258 aa3.76□□□□□ -1.81
NF1-201ENST00000356175 M0R2T5 61 aa3.75□□□□□ -1.81
NF1-201ENST00000356175 KRTAP7-1Q8IUC3 87 aa3.75□□□□□ -1.81
NF1-201ENST00000356175 SVEP1Q4LDE5 3571 aa3.7□□□□□ -1.82
NF1-201ENST00000356175 CSMD3Q7Z407 3707 aa3.69□□□□□ -1.82
NF1-201ENST00000356175 ALMS1Q8TCU4 4167 aa3.68□□□□□ -1.82
NF1-201ENST00000356175 KRTAP10-2P60368 255 aa3.64□□□□□ -1.83
NF1-201ENST00000356175 KRTAP12-2P59991 146 aa3.64□□□□□ -1.83
NF1-201ENST00000356175 KRTAP10-1P60331 282 aa3.63□□□□□ -1.83
NF1-201ENST00000356175 KRTAP13-2Q52LG2 175 aa3.62□□□□□ -1.83
NF1-201ENST00000356175 KRTAP15-1Q3LI76 137 aa3.61□□□□□ -1.83
NF1-201ENST00000356175 KRTAP1-1Q07627 177 aa3.6□□□□□ -1.83
NF1-201ENST00000356175 KRTAP1-3Q8IUG1 177 aa3.59□□□□□ -1.83
NF1-201ENST00000356175 MUC3AQ02505 3323 aa3.58□□□□□ -1.84
NF1-201ENST00000356175 TNP1P09430 55 aa3.58□□□□□ -1.84
NF1-201ENST00000356175 PP632Q6XCG6 107 aa3.56□□□□□ -1.84
NF1-201ENST00000356175 TRRAPQ9Y4A5 3859 aa3.54□□□□□ -1.84
NF1-201ENST00000356175 KRTAP13-1Q8IUC0 172 aa3.52□□□□□ -1.85
NF1-201ENST00000356175 CSMD2Q7Z408 3487 aa3.51□□□□□ -1.85
NF1-201ENST00000356175 LYSTQ99698 3801 aa3.5□□□□□ -1.85
NF1-201ENST00000356175 KRTAP13-3Q3SY46 172 aa3.5□□□□□ -1.85
NF1-201ENST00000356175 BSNQ9UPA5 3926 aa3.49□□□□□ -1.85
NF1-201ENST00000356175 Q5VSD8 79 aa3.46□□□□□ -1.85
NF1-201ENST00000356175 A0A1B0GVY2 172 aa3.46□□□□□ -1.86
NF1-201ENST00000356175 Q6ZRN7 208 aaPredicted RBP3.46□□□□□ -1.86
NF1-201ENST00000356175 KRTAP13-4Q3LI77 160 aa3.45□□□□□ -1.86
NF1-201ENST00000356175 KRTAP12-1P59990 96 aa3.43□□□□□ -1.86
NF1-201ENST00000356175 HECTD4Q9Y4D8 3996 aa3.34□□□□□ -1.88
NF1-201ENST00000356175 INE1O15225 51 aa3.31□□□□□ -1.88
NF1-201ENST00000356175 PRO2289Q9P1D8 64 aa3.3□□□□□ -1.88
NF1-201ENST00000356175 XP32Q5T750 250 aa3.28□□□□□ -1.88
NF1-201ENST00000356175 KRTAP3-1Q9BYR8 98 aa3.28□□□□□ -1.88
NF1-201ENST00000356175 RPS29P62273 56 aaKnown RBP3.26□□□□□ -1.89
NF1-201ENST00000356175 KRTAP10-6P60371 365 aaPredicted RBP3.25□□□□□ -1.89
NF1-201ENST00000356175 KRTAP1-4P0C5Y4 121 aa3.25□□□□□ -1.89
NF1-201ENST00000356175 DNAH3Q8TD57 4116 aa3.24□□□□□ -1.89
NF1-201ENST00000356175 CMYA5Q8N3K9 4069 aa3.19□□□□□ -1.9
NF1-201ENST00000356175 KRTAP10-10P60014 251 aa3.15□□□□□ -1.9
NF1-201ENST00000356175 ZNF469Q96JG9 3925 aaPredicted RBP3.14□□□□□ -1.91
NF1-201ENST00000356175 KRTAP3-2Q9BYR7 98 aa3.13□□□□□ -1.91
NF1-201ENST00000356175 DNAH7Q8WXX0 4024 aa3.13□□□□□ -1.91
NF1-201ENST00000356175 ANK2Q01484 3957 aa3.13□□□□□ -1.91
NF1-201ENST00000356175 CRCT1Q9UGL9 99 aa3.13□□□□□ -1.91
NF1-201ENST00000356175 KRTAP3-3Q9BYR6 98 aa3.06□□□□□ -1.92
NF1-201ENST00000356175 KRTAP23-1A1A580 65 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms