RNA–Protein interactions for RNA: ENST00000356175.7

NF1-201, Transcript of neurofibromin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NF1, Length 12,362 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-201ENST00000356175 PELP1Q8IZL8 1130 aaKnown RBP11.5□□□□□ -0.57
NF1-201ENST00000356175 MYT1Q01538 1121 aa11.36□□□□□ -0.59
NF1-201ENST00000356175 ERICH6Q7L0X2 663 aa11□□□□□ -0.65
NF1-201ENST00000356175 PCGF6Q9BYE7 350 aa10.91□□□□□ -0.66
NF1-201ENST00000356175 YTHDC1Q96MU7 727 aaKnown RBP10.9□□□□□ -0.66
NF1-201ENST00000356175 TTBK1Q5TCY1 1321 aaPredicted RBP10.84□□□□□ -0.67
NF1-201ENST00000356175 EHMT2Q96KQ7 1210 aa10.84□□□□□ -0.67
NF1-201ENST00000356175 CENPBP07199 599 aaPredicted RBP10.76□□□□□ -0.69
NF1-201ENST00000356175 PPARGC1BQ86YN6 1023 aaKnown RBP10.7□□□□□ -0.7
NF1-201ENST00000356175 SUPT5HO00267 1087 aaKnown RBP10.58□□□□□ -0.72
NF1-201ENST00000356175 CCER1Q8TC90 406 aaPredicted RBP10.48□□□□□ -0.73
NF1-201ENST00000356175 RANGAP1P46060 587 aaPredicted RBP10.48□□□□□ -0.73
NF1-201ENST00000356175 HRCP23327 699 aa10.48□□□□□ -0.73
NF1-201ENST00000356175 EIF5BO60841 1220 aaKnown RBP10.41□□□□□ -0.74
NF1-201ENST00000356175 GTF3C3Q9Y5Q9 886 aa10.39□□□□□ -0.75
NF1-201ENST00000356175 NEFLP07196 543 aa10.37□□□□□ -0.75
NF1-201ENST00000356175 SHROOM4Q9ULL8 1493 aa10.36□□□□□ -0.75
NF1-201ENST00000356175 BCL11AQ9H165 835 aa10.35□□□□□ -0.75
NF1-201ENST00000356175 BCANQ96GW7 911 aa10.32□□□□□ -0.76
NF1-201ENST00000356175 DCAF8L2P0C7V8 631 aa10.28□□□□□ -0.76
NF1-201ENST00000356175 SCAF1Q9H7N4 1312 aaKnown RBP10.26□□□□□ -0.77
NF1-201ENST00000356175 RTL5Q5HYW3 569 aaPredicted RBP10.24□□□□□ -0.77
NF1-201ENST00000356175 ZEB1P37275 1124 aaPredicted RBP10.23□□□□□ -0.77
NF1-201ENST00000356175 DAXXQ9UER7 740 aaPredicted RBP10.12□□□□□ -0.79
NF1-201ENST00000356175 FAM9AQ8IZU1 332 aaPredicted RBP10.11□□□□□ -0.79
NF1-201ENST00000356175 RTN4Q9NQC3 1192 aaKnown RBP10.08□□□□□ -0.8
NF1-201ENST00000356175 NBR1Q14596 966 aa10.07□□□□□ -0.8
NF1-201ENST00000356175 ACIN1Q9UKV3 1341 aaKnown RBP10.05□□□□□ -0.8
NF1-201ENST00000356175 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.05□□□□□ -0.8
NF1-201ENST00000356175 PRKCSHP14314 528 aaPredicted RBP10.02□□□□□ -0.8
NF1-201ENST00000356175 DIEXFQ68CQ4 756 aaKnown RBP10.01□□□□□ -0.81
NF1-201ENST00000356175 MYT1LQ9UL68 1186 aa10□□□□□ -0.81
NF1-201ENST00000356175 ZNF316A6NFI3 1004 aaPredicted RBP10□□□□□ -0.81
NF1-201ENST00000356175 CCDC136Q96JN2 1154 aa9.99□□□□□ -0.81
NF1-201ENST00000356175 GLIPR1L2Q4G1C9 344 aa9.98□□□□□ -0.81
NF1-201ENST00000356175 AMER1Q5JTC6 1135 aaPredicted RBP9.97□□□□□ -0.81
NF1-201ENST00000356175 CNGB1Q14028 1251 aaPredicted RBP9.92□□□□□ -0.82
NF1-201ENST00000356175 NEUROD1Q13562 356 aa9.92□□□□□ -0.82
NF1-201ENST00000356175 ARXQ96QS3 562 aa9.91□□□□□ -0.82
NF1-201ENST00000356175 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.88□□□□□ -0.83
NF1-201ENST00000356175 ANP32EQ9BTT0 268 aa9.87□□□□□ -0.83
NF1-201ENST00000356175 TRIM26Q12899 539 aaPredicted RBP9.87□□□□□ -0.83
NF1-201ENST00000356175 NPM2Q86SE8 214 aaKnown RBP9.86□□□□□ -0.83
NF1-201ENST00000356175 NISCHQ9Y2I1 1504 aa9.82□□□□□ -0.84
NF1-201ENST00000356175 APLP2Q06481 763 aa9.8□□□□□ -0.84
NF1-201ENST00000356175 CSRNP3Q8WYN3 585 aa9.78□□□□□ -0.84
NF1-201ENST00000356175 CDK11AQ9UQ88 783 aaPredicted RBP9.78□□□□□ -0.84
NF1-201ENST00000356175 ITGAEP38570 1179 aa9.78□□□□□ -0.84
NF1-201ENST00000356175 A0A0U1RQG5 324 aaPredicted RBP9.77□□□□□ -0.84
NF1-201ENST00000356175 ARID4BQ4LE39 1312 aaPredicted RBP9.74□□□□□ -0.85
NF1-201ENST00000356175 SLC24A1O60721 1099 aa9.74□□□□□ -0.85
NF1-201ENST00000356175 LOC105371045A0A1W2PR82 267 aa9.73□□□□□ -0.85
NF1-201ENST00000356175 POLR3GLQ9BT43 218 aa9.72□□□□□ -0.85
NF1-201ENST00000356175 CLSPNQ9HAW4 1339 aa9.69□□□□□ -0.86
NF1-201ENST00000356175 ANP32AP39687 249 aaKnown RBP9.68□□□□□ -0.86
NF1-201ENST00000356175 ARID3AQ99856 593 aa9.67□□□□□ -0.86
NF1-201ENST00000356175 FKBP8Q14318 412 aa9.66□□□□□ -0.86
NF1-201ENST00000356175 DEKP35659 375 aaKnown RBP9.66□□□□□ -0.86
NF1-201ENST00000356175 NAP1L5Q96NT1 182 aaPredicted RBP9.65□□□□□ -0.86
NF1-201ENST00000356175 PODXL2Q9NZ53 605 aa9.62□□□□□ -0.87
NF1-201ENST00000356175 IRX6P78412 446 aaPredicted RBP9.61□□□□□ -0.87
NF1-201ENST00000356175 HNRNPUL2Q1KMD3 747 aaKnown RBP9.61□□□□□ -0.87
NF1-201ENST00000356175 KAT6BQ8WYB5 2073 aa9.6□□□□□ -0.87
NF1-201ENST00000356175 ANO8Q9HCE9 1232 aaPredicted RBP9.58□□□□□ -0.88
NF1-201ENST00000356175 MYO15BQ96JP2 1530 aa9.57□□□□□ -0.88
NF1-201ENST00000356175 TIMELESSQ9UNS1 1208 aa9.56□□□□□ -0.88
NF1-201ENST00000356175 LAS1LQ9Y4W2 734 aaKnown RBP9.55□□□□□ -0.88
NF1-201ENST00000356175 PKNOX2Q96KN3 472 aa9.55□□□□□ -0.88
NF1-201ENST00000356175 NEFMP07197 916 aa9.5□□□□□ -0.89
NF1-201ENST00000356175 CDK11BP21127 795 aaKnown RBP9.5□□□□□ -0.89
NF1-201ENST00000356175 VSIG10Q8N0Z9 540 aa9.49□□□□□ -0.89
NF1-201ENST00000356175 CHIC1Q5VXU3 224 aa9.49□□□□□ -0.89
NF1-201ENST00000356175 CCDC180Q9P1Z9 1646 aa9.48□□□□□ -0.89
NF1-201ENST00000356175 ATP1B4Q9UN42 357 aaPredicted RBP9.46□□□□□ -0.9
NF1-201ENST00000356175 ZBTB47Q9UFB7 747 aaPredicted RBP9.46□□□□□ -0.9
NF1-201ENST00000356175 TNNT2P45379 298 aaPredicted RBP9.45□□□□□ -0.9
NF1-201ENST00000356175 TRIM41Q8WV44 630 aa9.45□□□□□ -0.9
NF1-201ENST00000356175 SALL2Q9Y467 1007 aaPredicted RBP9.44□□□□□ -0.9
NF1-201ENST00000356175 UBTFP17480 764 aaKnown RBP9.44□□□□□ -0.9
NF1-201ENST00000356175 PLEKHG5O94827 1062 aa9.41□□□□□ -0.9
NF1-201ENST00000356175 MIER1Q8N108 512 aa9.41□□□□□ -0.9
NF1-201ENST00000356175 ZBTB7CA1YPR0 619 aa9.39□□□□□ -0.91
NF1-201ENST00000356175 ANP32BQ92688 251 aaKnown RBP9.38□□□□□ -0.91
NF1-201ENST00000356175 SUPT16HQ9Y5B9 1047 aaKnown RBP9.36□□□□□ -0.91
NF1-201ENST00000356175 TRIM52Q96A61 297 aa9.36□□□□□ -0.91
NF1-201ENST00000356175 DCAF1Q9Y4B6 1507 aa9.35□□□□□ -0.91
NF1-201ENST00000356175 HSP90AA1P07900 732 aaKnown RBP9.35□□□□□ -0.91
NF1-201ENST00000356175 NOP58Q9Y2X3 529 aaKnown RBP9.34□□□□□ -0.91
NF1-201ENST00000356175 ZNF326Q5BKZ1 582 aaKnown RBP9.33□□□□□ -0.92
NF1-201ENST00000356175 MAPK8IP2Q13387 824 aaPredicted RBP9.32□□□□□ -0.92
NF1-201ENST00000356175 ANP32CO43423 234 aa9.32□□□□□ -0.92
NF1-201ENST00000356175 SENP3-EIF4A1A0A087X0R7 540 aa9.31□□□□□ -0.92
NF1-201ENST00000356175 ERICH6BQ5W0A0 696 aa9.3□□□□□ -0.92
NF1-201ENST00000356175 HAP1P54257 671 aaPredicted RBP9.29□□□□□ -0.92
NF1-201ENST00000356175 TPRNQ4KMQ1 711 aa9.29□□□□□ -0.92
NF1-201ENST00000356175 USP35Q9P2H5 1018 aa9.28□□□□□ -0.92
NF1-201ENST00000356175 TSHZ2Q9NRE2 1034 aa9.28□□□□□ -0.92
NF1-201ENST00000356175 RBM19Q9Y4C8 960 aaKnown RBP9.27□□□□□ -0.93
NF1-201ENST00000356175 HSP90AA2PQ14568 343 aaPredicted RBP9.26□□□□□ -0.93
NF1-201ENST00000356175 TRIM44Q96DX7 344 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms