RNA–Protein interactions for RNA: ENST00000326495.9

SSH1-202, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSH1, Length 13,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-202ENST00000326495 LCE6AA0A183 80 aa3.84□□□□□ -1.79
SSH1-202ENST00000326495 SMR3BP02814 79 aaPredicted RBP3.84□□□□□ -1.8
SSH1-202ENST00000326495 KRTAP1-1Q07627 177 aa3.84□□□□□ -1.8
SSH1-202ENST00000326495 HRNRQ86YZ3 2850 aaPredicted RBP3.83□□□□□ -1.8
SSH1-202ENST00000326495 KRTAP1-3Q8IUG1 177 aa3.83□□□□□ -1.8
SSH1-202ENST00000326495 CFAP47Q6ZTR5 3102 aa3.82□□□□□ -1.8
SSH1-202ENST00000326495 PANO1I0J062 215 aa3.82□□□□□ -1.8
SSH1-202ENST00000326495 UNC80Q8N2C7 3258 aa3.82□□□□□ -1.8
SSH1-202ENST00000326495 TGP01266 2768 aa3.82□□□□□ -1.8
SSH1-202ENST00000326495 KRTAP25-1Q3LHN0 102 aa3.81□□□□□ -1.8
SSH1-202ENST00000326495 CELSR1Q9NYQ6 3014 aa3.81□□□□□ -1.8
SSH1-202ENST00000326495 TENM4Q6N022 2769 aa3.8□□□□□ -1.8
SSH1-202ENST00000326495 BRCA2P51587 3418 aa3.8□□□□□ -1.8
SSH1-202ENST00000326495 KRTAP4-16G5E9R7 235 aaPredicted RBP3.79□□□□□ -1.8
SSH1-202ENST00000326495 KRTAP29-1A8MX34 341 aaPredicted RBP3.79□□□□□ -1.8
SSH1-202ENST00000326495 Q8NDZ9 215 aa3.79□□□□□ -1.8
SSH1-202ENST00000326495 KRTAP26-1Q6PEX3 210 aa3.78□□□□□ -1.8
SSH1-202ENST00000326495 C20orf166-AS1Q96NR2 134 aa3.78□□□□□ -1.8
SSH1-202ENST00000326495 KRTAP23-1A1A580 65 aa3.77□□□□□ -1.81
SSH1-202ENST00000326495 M0R2T5 61 aa3.74□□□□□ -1.81
SSH1-202ENST00000326495 A6NN06 94 aa3.74□□□□□ -1.81
SSH1-202ENST00000326495 EYSQ5T1H1 3165 aa3.71□□□□□ -1.81
SSH1-202ENST00000326495 VCANP13611 3396 aa3.71□□□□□ -1.82
SSH1-202ENST00000326495 P0C880 135 aa3.71□□□□□ -1.82
SSH1-202ENST00000326495 VWFP04275 2813 aa3.71□□□□□ -1.82
SSH1-202ENST00000326495 PKD1L1Q8TDX9 2849 aa3.71□□□□□ -1.82
SSH1-202ENST00000326495 ADM2Q7Z4H4 148 aa3.7□□□□□ -1.82
SSH1-202ENST00000326495 TNP1P09430 55 aa3.7□□□□□ -1.82
SSH1-202ENST00000326495 CDH23Q9H251 3354 aa3.7□□□□□ -1.82
SSH1-202ENST00000326495 SPTBN5Q9NRC6 3674 aaKnown RBP3.69□□□□□ -1.82
SSH1-202ENST00000326495 SPEGQ15772 3267 aa3.68□□□□□ -1.82
SSH1-202ENST00000326495 KRTAP1-5Q9BYS1 174 aa3.67□□□□□ -1.82
SSH1-202ENST00000326495 KRTAP21-3Q3LHN1 58 aa3.65□□□□□ -1.82
SSH1-202ENST00000326495 AKAP9Q99996 3911 aa3.65□□□□□ -1.83
SSH1-202ENST00000326495 TENM2Q9NT68 2774 aa3.65□□□□□ -1.83
SSH1-202ENST00000326495 Q5VSD8 79 aa3.64□□□□□ -1.83
SSH1-202ENST00000326495 COL7A1Q02388 2944 aa3.64□□□□□ -1.83
SSH1-202ENST00000326495 NBPF19A0A087WUL8 3843 aa3.64□□□□□ -1.83
SSH1-202ENST00000326495 A8MUU9 505 aa3.62□□□□□ -1.83
SSH1-202ENST00000326495 WDFY3Q8IZQ1 3526 aa3.61□□□□□ -1.83
SSH1-202ENST00000326495 PRO2289Q9P1D8 64 aa3.61□□□□□ -1.83
SSH1-202ENST00000326495 Q6ZRN7 208 aaPredicted RBP3.59□□□□□ -1.83
SSH1-202ENST00000326495 SZT2Q5T011 3432 aa3.59□□□□□ -1.83
SSH1-202ENST00000326495 KRTAP13-1Q8IUC0 172 aa3.58□□□□□ -1.84
SSH1-202ENST00000326495 LOC400499M0QZD8 3231 aa3.58□□□□□ -1.84
SSH1-202ENST00000326495 ZFHX3Q15911 3703 aa3.58□□□□□ -1.84
SSH1-202ENST00000326495 KRTAP10-1P60331 282 aa3.58□□□□□ -1.84
SSH1-202ENST00000326495 LAMA5O15230 3695 aa3.57□□□□□ -1.84
SSH1-202ENST00000326495 KRTAP10-2P60368 255 aa3.57□□□□□ -1.84
SSH1-202ENST00000326495 KRTAP11-1Q8IUC1 163 aa3.57□□□□□ -1.84
SSH1-202ENST00000326495 INE1O15225 51 aa3.56□□□□□ -1.84
SSH1-202ENST00000326495 C10orf95Q9H7T3 257 aa3.55□□□□□ -1.84
SSH1-202ENST00000326495 MYO15AQ9UKN7 3530 aa3.55□□□□□ -1.84
SSH1-202ENST00000326495 A8MU10 97 aa3.54□□□□□ -1.84
SSH1-202ENST00000326495 FBN1P35555 2871 aaKnown RBP3.54□□□□□ -1.84
SSH1-202ENST00000326495 MEGF8Q7Z7M0 2845 aa3.51□□□□□ -1.85
SSH1-202ENST00000326495 SPENQ96T58 3664 aaKnown RBP3.49□□□□□ -1.85
SSH1-202ENST00000326495 TPRXLQ17RH7 258 aa3.48□□□□□ -1.85
SSH1-202ENST00000326495 DMDP11532 3685 aa3.48□□□□□ -1.85
SSH1-202ENST00000326495 VPS13CQ709C8 3753 aa3.47□□□□□ -1.85
SSH1-202ENST00000326495 KRTAP19-4Q3LI73 84 aa3.47□□□□□ -1.85
SSH1-202ENST00000326495 KRTAP7-1Q8IUC3 87 aa3.46□□□□□ -1.86
SSH1-202ENST00000326495 ASPMQ8IZT6 3477 aa3.46□□□□□ -1.86
SSH1-202ENST00000326495 SMG1Q96Q15 3661 aaKnown RBP3.46□□□□□ -1.86
SSH1-202ENST00000326495 OTOGQ6ZRI0 2925 aa3.45□□□□□ -1.86
SSH1-202ENST00000326495 KRTAP13-2Q52LG2 175 aa3.44□□□□□ -1.86
SSH1-202ENST00000326495 FBN3Q75N90 2809 aa3.43□□□□□ -1.86
SSH1-202ENST00000326495 H0YAA0 97 aa3.42□□□□□ -1.86
SSH1-202ENST00000326495 TRRAPQ9Y4A5 3859 aa3.41□□□□□ -1.86
SSH1-202ENST00000326495 ZFHX4Q86UP3 3567 aa3.39□□□□□ -1.87
SSH1-202ENST00000326495 CSMD1Q96PZ7 3565 aa3.37□□□□□ -1.87
SSH1-202ENST00000326495 DCHS1Q96JQ0 3298 aa3.36□□□□□ -1.87
SSH1-202ENST00000326495 RELNP78509 3460 aa3.34□□□□□ -1.87
SSH1-202ENST00000326495 MT3P25713 68 aa3.33□□□□□ -1.88
SSH1-202ENST00000326495 ALMS1Q8TCU4 4167 aa3.31□□□□□ -1.88
SSH1-202ENST00000326495 XP32Q5T750 250 aa3.31□□□□□ -1.88
SSH1-202ENST00000326495 CMYA5Q8N3K9 4069 aa3.29□□□□□ -1.88
SSH1-202ENST00000326495 KRTAP1-4P0C5Y4 121 aa3.28□□□□□ -1.88
SSH1-202ENST00000326495 BSNQ9UPA5 3926 aa3.27□□□□□ -1.89
SSH1-202ENST00000326495 KRTAP13-4Q3LI77 160 aa3.27□□□□□ -1.89
SSH1-202ENST00000326495 KRTAP10-8P60410 259 aa3.26□□□□□ -1.89
SSH1-202ENST00000326495 KRTAP13-3Q3SY46 172 aa3.24□□□□□ -1.89
SSH1-202ENST00000326495 LYSTQ99698 3801 aa3.22□□□□□ -1.89
SSH1-202ENST00000326495 DNAH3Q8TD57 4116 aa3.22□□□□□ -1.89
SSH1-202ENST00000326495 HECTD4Q9Y4D8 3996 aa3.21□□□□□ -1.9
SSH1-202ENST00000326495 DNAH7Q8WXX0 4024 aa3.2□□□□□ -1.9
SSH1-202ENST00000326495 SVEP1Q4LDE5 3571 aa3.18□□□□□ -1.9
SSH1-202ENST00000326495 CUBNO60494 3623 aa3.15□□□□□ -1.9
SSH1-202ENST00000326495 MUC3AQ02505 3323 aa3.15□□□□□ -1.9
SSH1-202ENST00000326495 KRTAP12-2P59991 146 aa3.14□□□□□ -1.91
SSH1-202ENST00000326495 KRTAP10-10P60014 251 aa3.13□□□□□ -1.91
SSH1-202ENST00000326495 CSMD3Q7Z407 3707 aa3.13□□□□□ -1.91
SSH1-202ENST00000326495 ZNF469Q96JG9 3925 aaPredicted RBP3.11□□□□□ -1.91
SSH1-202ENST00000326495 KRTAP12-1P59990 96 aa3.11□□□□□ -1.91
SSH1-202ENST00000326495 DNAH1Q9P2D7 4330 aa3.08□□□□□ -1.92
SSH1-202ENST00000326495 A0A1B0GVY2 172 aa3.07□□□□□ -1.92
SSH1-202ENST00000326495 ANK2Q01484 3957 aa3.07□□□□□ -1.92
SSH1-202ENST00000326495 CSMD2Q7Z408 3487 aa3.05□□□□□ -1.92
SSH1-202ENST00000326495 KMT2AQ03164 3969 aa3.02□□□□□ -1.93
SSH1-202ENST00000326495 DNAH2Q9P225 4427 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms