RNA–Protein interactions for RNA: ENST00000326495.9

SSH1-202, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSH1, Length 13,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-202ENST00000326495 PELP1Q8IZL8 1130 aaKnown RBP10.43□□□□□ -0.74
SSH1-202ENST00000326495 MYT1Q01538 1121 aa10.25□□□□□ -0.77
SSH1-202ENST00000326495 DCAF8L2P0C7V8 631 aa10.17□□□□□ -0.78
SSH1-202ENST00000326495 NISCHQ9Y2I1 1504 aa10.04□□□□□ -0.8
SSH1-202ENST00000326495 CCER1Q8TC90 406 aaPredicted RBP9.88□□□□□ -0.83
SSH1-202ENST00000326495 FAM9AQ8IZU1 332 aaPredicted RBP9.87□□□□□ -0.83
SSH1-202ENST00000326495 SUPT5HO00267 1087 aaKnown RBP9.79□□□□□ -0.84
SSH1-202ENST00000326495 ZEB1P37275 1124 aaPredicted RBP9.78□□□□□ -0.84
SSH1-202ENST00000326495 CENPBP07199 599 aaPredicted RBP9.71□□□□□ -0.85
SSH1-202ENST00000326495 YTHDC1Q96MU7 727 aaKnown RBP9.7□□□□□ -0.86
SSH1-202ENST00000326495 TTBK1Q5TCY1 1321 aaPredicted RBP9.69□□□□□ -0.86
SSH1-202ENST00000326495 APLP2Q06481 763 aa9.68□□□□□ -0.86
SSH1-202ENST00000326495 ERICH6Q7L0X2 663 aa9.62□□□□□ -0.87
SSH1-202ENST00000326495 SHROOM4Q9ULL8 1493 aa9.6□□□□□ -0.87
SSH1-202ENST00000326495 RANGAP1P46060 587 aaPredicted RBP9.49□□□□□ -0.89
SSH1-202ENST00000326495 PCGF6Q9BYE7 350 aa9.47□□□□□ -0.89
SSH1-202ENST00000326495 NEFLP07196 543 aa9.44□□□□□ -0.9
SSH1-202ENST00000326495 EHMT2Q96KQ7 1210 aa9.35□□□□□ -0.91
SSH1-202ENST00000326495 TRIM41Q8WV44 630 aa9.23□□□□□ -0.93
SSH1-202ENST00000326495 DAXXQ9UER7 740 aaPredicted RBP9.22□□□□□ -0.93
SSH1-202ENST00000326495 TRIM26Q12899 539 aaPredicted RBP9.21□□□□□ -0.94
SSH1-202ENST00000326495 CLSPNQ9HAW4 1339 aa9.16□□□□□ -0.94
SSH1-202ENST00000326495 HRCP23327 699 aa9.15□□□□□ -0.94
SSH1-202ENST00000326495 UBTFP17480 764 aaKnown RBP9.11□□□□□ -0.95
SSH1-202ENST00000326495 RTL5Q5HYW3 569 aaPredicted RBP9.07□□□□□ -0.96
SSH1-202ENST00000326495 MYT1LQ9UL68 1186 aa9.06□□□□□ -0.96
SSH1-202ENST00000326495 ZNF316A6NFI3 1004 aaPredicted RBP8.99□□□□□ -0.97
SSH1-202ENST00000326495 ATP1B4Q9UN42 357 aaPredicted RBP8.99□□□□□ -0.97
SSH1-202ENST00000326495 ACIN1Q9UKV3 1341 aaKnown RBP8.98□□□□□ -0.97
SSH1-202ENST00000326495 GLIPR1L2Q4G1C9 344 aa8.92□□□□□ -0.98
SSH1-202ENST00000326495 DIEXFQ68CQ4 756 aaKnown RBP8.92□□□□□ -0.98
SSH1-202ENST00000326495 NEFMP07197 916 aa8.9□□□□□ -0.99
SSH1-202ENST00000326495 POLR3GLQ9BT43 218 aa8.89□□□□□ -0.99
SSH1-202ENST00000326495 SLC24A1O60721 1099 aa8.83□□□□□ -1
SSH1-202ENST00000326495 CDK11AQ9UQ88 783 aaPredicted RBP8.82□□□□□ -1
SSH1-202ENST00000326495 EIF5BO60841 1220 aaKnown RBP8.79□□□□□ -1
SSH1-202ENST00000326495 CCDC180Q9P1Z9 1646 aa8.79□□□□□ -1
SSH1-202ENST00000326495 CHIC1Q5VXU3 224 aa8.77□□□□□ -1.01
SSH1-202ENST00000326495 ANP32BQ92688 251 aaKnown RBP8.76□□□□□ -1.01
SSH1-202ENST00000326495 ZBTB47Q9UFB7 747 aaPredicted RBP8.76□□□□□ -1.01
SSH1-202ENST00000326495 ANP32CO43423 234 aa8.75□□□□□ -1.01
SSH1-202ENST00000326495 PPARGC1BQ86YN6 1023 aaKnown RBP8.74□□□□□ -1.01
SSH1-202ENST00000326495 GTF3C3Q9Y5Q9 886 aa8.74□□□□□ -1.01
SSH1-202ENST00000326495 ANP32AP39687 249 aaKnown RBP8.73□□□□□ -1.01
SSH1-202ENST00000326495 ANP32EQ9BTT0 268 aa8.72□□□□□ -1.01
SSH1-202ENST00000326495 ITGAEP38570 1179 aa8.71□□□□□ -1.02
SSH1-202ENST00000326495 HNRNPUL2Q1KMD3 747 aaKnown RBP8.71□□□□□ -1.02
SSH1-202ENST00000326495 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.69□□□□□ -1.02
SSH1-202ENST00000326495 LOC105371045A0A1W2PR82 267 aa8.68□□□□□ -1.02
SSH1-202ENST00000326495 DCAF1Q9Y4B6 1507 aa8.68□□□□□ -1.02
SSH1-202ENST00000326495 UPF2Q9HAU5 1272 aaKnown RBP8.63□□□□□ -1.03
SSH1-202ENST00000326495 SLC4A1APQ9BWU0 796 aaKnown RBP8.6□□□□□ -1.03
SSH1-202ENST00000326495 FAM50AQ14320 339 aaKnown RBP8.59□□□□□ -1.03
SSH1-202ENST00000326495 CANXP27824 592 aaKnown RBP8.58□□□□□ -1.04
SSH1-202ENST00000326495 BCANQ96GW7 911 aa8.55□□□□□ -1.04
SSH1-202ENST00000326495 ARID4BQ4LE39 1312 aaPredicted RBP8.55□□□□□ -1.04
SSH1-202ENST00000326495 TRIM52Q96A61 297 aa8.53□□□□□ -1.04
SSH1-202ENST00000326495 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.53□□□□□ -1.04
SSH1-202ENST00000326495 NEUROD1Q13562 356 aa8.52□□□□□ -1.05
SSH1-202ENST00000326495 EEA1Q15075 1411 aa8.52□□□□□ -1.05
SSH1-202ENST00000326495 HSP90AA1P07900 732 aaKnown RBP8.52□□□□□ -1.05
SSH1-202ENST00000326495 CNGB1Q14028 1251 aaPredicted RBP8.5□□□□□ -1.05
SSH1-202ENST00000326495 TNNT2P45379 298 aaPredicted RBP8.48□□□□□ -1.05
SSH1-202ENST00000326495 NCLP19338 710 aaKnown RBP8.46□□□□□ -1.05
SSH1-202ENST00000326495 TRIM44Q96DX7 344 aaPredicted RBP8.46□□□□□ -1.05
SSH1-202ENST00000326495 CFAP44Q96MT7 982 aa8.46□□□□□ -1.06
SSH1-202ENST00000326495 ABCC9O60706 1549 aa8.46□□□□□ -1.06
SSH1-202ENST00000326495 CHMP4BQ9H444 224 aaKnown RBP8.45□□□□□ -1.06
SSH1-202ENST00000326495 TONSLQ96HA7 1378 aa8.45□□□□□ -1.06
SSH1-202ENST00000326495 DDRGK1Q96HY6 314 aa8.44□□□□□ -1.06
SSH1-202ENST00000326495 SCRIBQ14160 1630 aa8.43□□□□□ -1.06
SSH1-202ENST00000326495 ZNF326Q5BKZ1 582 aaKnown RBP8.42□□□□□ -1.06
SSH1-202ENST00000326495 FKBP8Q14318 412 aa8.42□□□□□ -1.06
SSH1-202ENST00000326495 BECN1Q14457 450 aa8.41□□□□□ -1.06
SSH1-202ENST00000326495 GOLGA6L22H0YM25 854 aa8.41□□□□□ -1.06
SSH1-202ENST00000326495 NPM2Q86SE8 214 aaKnown RBP8.4□□□□□ -1.06
SSH1-202ENST00000326495 CCDC136Q96JN2 1154 aa8.4□□□□□ -1.07
SSH1-202ENST00000326495 HMGB3O15347 200 aaKnown RBP8.38□□□□□ -1.07
SSH1-202ENST00000326495 HMGB1P09429 215 aaKnown RBP8.38□□□□□ -1.07
SSH1-202ENST00000326495 CDK11BP21127 795 aaKnown RBP8.37□□□□□ -1.07
SSH1-202ENST00000326495 NRDCO43847 1150 aa8.37□□□□□ -1.07
SSH1-202ENST00000326495 HNRNPUQ00839 825 aaKnown RBP eCLIP8.37□□□□□ -1.07
SSH1-202ENST00000326495 CDCA8Q53HL2 280 aa8.36□□□□□ -1.07
SSH1-202ENST00000326495 L1TD1Q5T7N2 865 aaKnown RBP8.35□□□□□ -1.07
SSH1-202ENST00000326495 ERICH6BQ5W0A0 696 aa8.35□□□□□ -1.07
SSH1-202ENST00000326495 USP35Q9P2H5 1018 aa8.35□□□□□ -1.07
SSH1-202ENST00000326495 MYH16Q9H6N6 1097 aa8.35□□□□□ -1.07
SSH1-202ENST00000326495 CSRNP3Q8WYN3 585 aa8.34□□□□□ -1.07
SSH1-202ENST00000326495 ZCCHC6Q5VYS8 1495 aaKnown RBP8.34□□□□□ -1.07
SSH1-202ENST00000326495 PTMSP20962 102 aa8.34□□□□□ -1.07
SSH1-202ENST00000326495 NBR1Q14596 966 aa8.34□□□□□ -1.07
SSH1-202ENST00000326495 RSF1Q96T23 1441 aaPredicted RBP8.34□□□□□ -1.08
SSH1-202ENST00000326495 MS4A1P11836 297 aa8.33□□□□□ -1.08
SSH1-202ENST00000326495 HAP1P54257 671 aaPredicted RBP8.32□□□□□ -1.08
SSH1-202ENST00000326495 TMC1Q8TDI8 760 aa8.31□□□□□ -1.08
SSH1-202ENST00000326495 CHMP4AQ9BY43 222 aa8.31□□□□□ -1.08
SSH1-202ENST00000326495 TIMELESSQ9UNS1 1208 aa8.31□□□□□ -1.08
SSH1-202ENST00000326495 NACADO15069 1562 aa8.3□□□□□ -1.08
SSH1-202ENST00000326495 SCAF1Q9H7N4 1312 aaKnown RBP8.3□□□□□ -1.08
SSH1-202ENST00000326495 RB1CC1Q8TDY2 1594 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 194.1 ms