RNA–Protein interactions for RNA: ENST00000324545.8

USP9X-201, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 5 BASIC

Gene USP9X, Length 12,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-201ENST00000324545 USP34Q70CQ2 3546 aa4.55□□□□□ -1.68
USP9X-201ENST00000324545 TGP01266 2768 aa4.55□□□□□ -1.68
USP9X-201ENST00000324545 Q5VV11 94 aa4.55□□□□□ -1.68
USP9X-201ENST00000324545 Q6ZR54 194 aa4.53□□□□□ -1.68
USP9X-201ENST00000324545 KRTAP10-1P60331 282 aa4.53□□□□□ -1.68
USP9X-201ENST00000324545 NDUFAF8A1L188 74 aa4.53□□□□□ -1.68
USP9X-201ENST00000324545 LAMA5O15230 3695 aa4.51□□□□□ -1.69
USP9X-201ENST00000324545 KRTAP10-2P60368 255 aa4.51□□□□□ -1.69
USP9X-201ENST00000324545 MMP24-AS1A0A0U1RRL7 71 aa4.51□□□□□ -1.69
USP9X-201ENST00000324545 RPL37P61927 97 aaKnown RBP4.5□□□□□ -1.69
USP9X-201ENST00000324545 SEC61BP60468 96 aaKnown RBP4.5□□□□□ -1.69
USP9X-201ENST00000324545 LINC01558Q9Y6Z2 57 aa4.5□□□□□ -1.69
USP9X-201ENST00000324545 KRTAP16-1A8MUX0 517 aa4.5□□□□□ -1.69
USP9X-201ENST00000324545 Q5XG85 94 aa4.5□□□□□ -1.69
USP9X-201ENST00000324545 DMDP11532 3685 aa4.49□□□□□ -1.69
USP9X-201ENST00000324545 SMG1Q96Q15 3661 aaKnown RBP4.49□□□□□ -1.69
USP9X-201ENST00000324545 ZFHX4Q86UP3 3567 aa4.49□□□□□ -1.69
USP9X-201ENST00000324545 TENM4Q6N022 2769 aa4.49□□□□□ -1.69
USP9X-201ENST00000324545 COL7A1Q02388 2944 aa4.48□□□□□ -1.69
USP9X-201ENST00000324545 A0A096LNT2 108 aa4.47□□□□□ -1.69
USP9X-201ENST00000324545 CDH23Q9H251 3354 aa4.46□□□□□ -1.7
USP9X-201ENST00000324545 A0A1B0GVY2 172 aa4.46□□□□□ -1.7
USP9X-201ENST00000324545 SPENQ96T58 3664 aaKnown RBP4.44□□□□□ -1.7
USP9X-201ENST00000324545 EYSQ5T1H1 3165 aa4.43□□□□□ -1.7
USP9X-201ENST00000324545 TENM2Q9NT68 2774 aa4.42□□□□□ -1.7
USP9X-201ENST00000324545 KRTAP1-5Q9BYS1 174 aa4.42□□□□□ -1.7
USP9X-201ENST00000324545 KRTAP1-3Q8IUG1 177 aa4.41□□□□□ -1.7
USP9X-201ENST00000324545 A8MUU9 505 aa4.41□□□□□ -1.7
USP9X-201ENST00000324545 OXTP01178 125 aa4.4□□□□□ -1.7
USP9X-201ENST00000324545 MYO15AQ9UKN7 3530 aa4.4□□□□□ -1.71
USP9X-201ENST00000324545 A0A087X002 238 aa4.4□□□□□ -1.71
USP9X-201ENST00000324545 NOTCH2NLQ7Z3S9 236 aa4.4□□□□□ -1.71
USP9X-201ENST00000324545 ZFHX3Q15911 3703 aa4.39□□□□□ -1.71
USP9X-201ENST00000324545 PANO1I0J062 215 aa4.37□□□□□ -1.71
USP9X-201ENST00000324545 SPRR1BP22528 89 aa4.37□□□□□ -1.71
USP9X-201ENST00000324545 KRTAP1-1Q07627 177 aa4.37□□□□□ -1.71
USP9X-201ENST00000324545 KRTAP26-1Q6PEX3 210 aa4.36□□□□□ -1.71
USP9X-201ENST00000324545 ASPMQ8IZT6 3477 aa4.36□□□□□ -1.71
USP9X-201ENST00000324545 LOC400499M0QZD8 3231 aa4.36□□□□□ -1.71
USP9X-201ENST00000324545 PLAC8Q9NZF1 115 aa4.35□□□□□ -1.71
USP9X-201ENST00000324545 AKAP9Q99996 3911 aa4.34□□□□□ -1.71
USP9X-201ENST00000324545 LINC00472Q9H8W2 130 aa4.32□□□□□ -1.72
USP9X-201ENST00000324545 VPS13CQ709C8 3753 aa4.32□□□□□ -1.72
USP9X-201ENST00000324545 KRTAP10-8P60410 259 aa4.31□□□□□ -1.72
USP9X-201ENST00000324545 KRTAP25-1Q3LHN0 102 aa4.29□□□□□ -1.72
USP9X-201ENST00000324545 HRNRQ86YZ3 2850 aaPredicted RBP4.29□□□□□ -1.72
USP9X-201ENST00000324545 LCE6AA0A183 80 aa4.29□□□□□ -1.72
USP9X-201ENST00000324545 P0C880 135 aa4.26□□□□□ -1.73
USP9X-201ENST00000324545 OTOGQ6ZRI0 2925 aa4.26□□□□□ -1.73
USP9X-201ENST00000324545 KRTAP11-1Q8IUC1 163 aa4.25□□□□□ -1.73
USP9X-201ENST00000324545 TNP1P09430 55 aa4.22□□□□□ -1.73
USP9X-201ENST00000324545 CSMD1Q96PZ7 3565 aa4.21□□□□□ -1.74
USP9X-201ENST00000324545 KRTAP4-16G5E9R7 235 aaPredicted RBP4.2□□□□□ -1.74
USP9X-201ENST00000324545 FBN1P35555 2871 aaKnown RBP4.2□□□□□ -1.74
USP9X-201ENST00000324545 SPRR1AP35321 89 aa4.17□□□□□ -1.74
USP9X-201ENST00000324545 KRTAP10-10P60014 251 aa4.15□□□□□ -1.74
USP9X-201ENST00000324545 FBN3Q75N90 2809 aa4.14□□□□□ -1.75
USP9X-201ENST00000324545 A6NN06 94 aa4.14□□□□□ -1.75
USP9X-201ENST00000324545 LYSTQ99698 3801 aa4.13□□□□□ -1.75
USP9X-201ENST00000324545 CSMD3Q7Z407 3707 aa4.11□□□□□ -1.75
USP9X-201ENST00000324545 KRTAP13-2Q52LG2 175 aa4.1□□□□□ -1.75
USP9X-201ENST00000324545 RELNP78509 3460 aa4.1□□□□□ -1.75
USP9X-201ENST00000324545 TRRAPQ9Y4A5 3859 aa4.09□□□□□ -1.75
USP9X-201ENST00000324545 DCHS1Q96JQ0 3298 aa4.09□□□□□ -1.75
USP9X-201ENST00000324545 KRTAP29-1A8MX34 341 aaPredicted RBP4.05□□□□□ -1.76
USP9X-201ENST00000324545 CRCT1Q9UGL9 99 aa4.05□□□□□ -1.76
USP9X-201ENST00000324545 CUBNO60494 3623 aa4.01□□□□□ -1.77
USP9X-201ENST00000324545 H0YAA0 97 aa3.99□□□□□ -1.77
USP9X-201ENST00000324545 KRTAP7-1Q8IUC3 87 aa3.98□□□□□ -1.77
USP9X-201ENST00000324545 BSNQ9UPA5 3926 aa3.95□□□□□ -1.78
USP9X-201ENST00000324545 Q6ZRN7 208 aaPredicted RBP3.94□□□□□ -1.78
USP9X-201ENST00000324545 KRTAP12-2P59991 146 aa3.92□□□□□ -1.78
USP9X-201ENST00000324545 ASB16-AS1Q495Z4 193 aa3.92□□□□□ -1.78
USP9X-201ENST00000324545 XP32Q5T750 250 aa3.91□□□□□ -1.78
USP9X-201ENST00000324545 CMYA5Q8N3K9 4069 aa3.91□□□□□ -1.78
USP9X-201ENST00000324545 PRO2289Q9P1D8 64 aa3.89□□□□□ -1.79
USP9X-201ENST00000324545 SVEP1Q4LDE5 3571 aa3.86□□□□□ -1.79
USP9X-201ENST00000324545 CSMD2Q7Z408 3487 aa3.86□□□□□ -1.79
USP9X-201ENST00000324545 ANK2Q01484 3957 aa3.84□□□□□ -1.79
USP9X-201ENST00000324545 KRTAP15-1Q3LI76 137 aa3.84□□□□□ -1.8
USP9X-201ENST00000324545 PP632Q6XCG6 107 aa3.83□□□□□ -1.8
USP9X-201ENST00000324545 DNAH7Q8WXX0 4024 aa3.82□□□□□ -1.8
USP9X-201ENST00000324545 HECTD4Q9Y4D8 3996 aa3.79□□□□□ -1.8
USP9X-201ENST00000324545 ALMS1Q8TCU4 4167 aa3.79□□□□□ -1.8
USP9X-201ENST00000324545 KRTAP13-1Q8IUC0 172 aa3.78□□□□□ -1.8
USP9X-201ENST00000324545 DNAH3Q8TD57 4116 aa3.77□□□□□ -1.81
USP9X-201ENST00000324545 RPS29P62273 56 aaKnown RBP3.76□□□□□ -1.81
USP9X-201ENST00000324545 ZNF469Q96JG9 3925 aaPredicted RBP3.71□□□□□ -1.82
USP9X-201ENST00000324545 KMT2AQ03164 3969 aa3.7□□□□□ -1.82
USP9X-201ENST00000324545 KRTAP1-4P0C5Y4 121 aa3.68□□□□□ -1.82
USP9X-201ENST00000324545 TPRXLQ17RH7 258 aa3.67□□□□□ -1.82
USP9X-201ENST00000324545 MUC3AQ02505 3323 aa3.67□□□□□ -1.82
USP9X-201ENST00000324545 DNAH2Q9P225 4427 aa3.66□□□□□ -1.82
USP9X-201ENST00000324545 KRTAP13-3Q3SY46 172 aa3.65□□□□□ -1.83
USP9X-201ENST00000324545 DNAH1Q9P2D7 4330 aa3.63□□□□□ -1.83
USP9X-201ENST00000324545 KRTAP13-4Q3LI77 160 aa3.59□□□□□ -1.84
USP9X-201ENST00000324545 KRTAP12-1P59990 96 aa3.58□□□□□ -1.84
USP9X-201ENST00000324545 VPS13BQ7Z7G8 4022 aa3.58□□□□□ -1.84
USP9X-201ENST00000324545 LORP23490 312 aaPredicted RBP3.54□□□□□ -1.84
USP9X-201ENST00000324545 DNAH6Q9C0G6 4158 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms