RNA–Protein interactions for RNA: ENST00000312358.11

SPEG-201, Transcript of SPEG complex locus, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SPEG, Length 10,782 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEG-201ENST00000312358 KRTAP1-1Q07627 177 aa8.35□□□□□ -1.07
SPEG-201ENST00000312358 TNP1P09430 55 aa8.34□□□□□ -1.07
SPEG-201ENST00000312358 DCHS2Q6V1P9 2916 aa8.33□□□□□ -1.08
SPEG-201ENST00000312358 TNRC18O15417 2968 aaPredicted RBP8.32□□□□□ -1.08
SPEG-201ENST00000312358 ZZEF1O43149 2961 aa8.31□□□□□ -1.08
SPEG-201ENST00000312358 FBN2P35556 2912 aa8.27□□□□□ -1.09
SPEG-201ENST00000312358 KRTAP10-1P60331 282 aa8.19□□□□□ -1.1
SPEG-201ENST00000312358 KRTAP13-1Q8IUC0 172 aa8.18□□□□□ -1.1
SPEG-201ENST00000312358 MXRA5Q9NR99 2828 aa8.16□□□□□ -1.1
SPEG-201ENST00000312358 KRTAP7-1Q8IUC3 87 aa8.13□□□□□ -1.11
SPEG-201ENST00000312358 VWFP04275 2813 aa8.12□□□□□ -1.11
SPEG-201ENST00000312358 Q5VSD8 79 aa8.12□□□□□ -1.11
SPEG-201ENST00000312358 KRTAP10-2P60368 255 aa8.1□□□□□ -1.11
SPEG-201ENST00000312358 Q6ZRN7 208 aaPredicted RBP8.09□□□□□ -1.11
SPEG-201ENST00000312358 WDFY4Q6ZS81 3184 aa8.08□□□□□ -1.12
SPEG-201ENST00000312358 HRNRQ86YZ3 2850 aaPredicted RBP8.07□□□□□ -1.12
SPEG-201ENST00000312358 RANBP2P49792 3224 aaKnown RBP8.07□□□□□ -1.12
SPEG-201ENST00000312358 KRTAP13-2Q52LG2 175 aa8.07□□□□□ -1.12
SPEG-201ENST00000312358 DMXL1Q9Y485 3027 aa8.07□□□□□ -1.12
SPEG-201ENST00000312358 LAMA1P25391 3075 aa8.05□□□□□ -1.12
SPEG-201ENST00000312358 PKD1L1Q8TDX9 2849 aa8.04□□□□□ -1.12
SPEG-201ENST00000312358 KRTAP10-8P60410 259 aa8.01□□□□□ -1.13
SPEG-201ENST00000312358 ATMQ13315 3056 aa7.96□□□□□ -1.13
SPEG-201ENST00000312358 CELSR1Q9NYQ6 3014 aa7.96□□□□□ -1.13
SPEG-201ENST00000312358 XIRP2A4UGR9 3374 aa7.96□□□□□ -1.14
SPEG-201ENST00000312358 TENM4Q6N022 2769 aa7.96□□□□□ -1.14
SPEG-201ENST00000312358 ZFHX3Q15911 3703 aa7.96□□□□□ -1.14
SPEG-201ENST00000312358 ADGRG4Q8IZF6 3080 aa7.94□□□□□ -1.14
SPEG-201ENST00000312358 TENM2Q9NT68 2774 aa7.93□□□□□ -1.14
SPEG-201ENST00000312358 MKI67P46013 3256 aaKnown RBP7.92□□□□□ -1.14
SPEG-201ENST00000312358 HTTP42858 3142 aa7.9□□□□□ -1.15
SPEG-201ENST00000312358 BOD1L1Q8NFC6 3051 aa7.88□□□□□ -1.15
SPEG-201ENST00000312358 BRCA2P51587 3418 aa7.82□□□□□ -1.16
SPEG-201ENST00000312358 COL7A1Q02388 2944 aa7.81□□□□□ -1.16
SPEG-201ENST00000312358 CELSR3Q9NYQ7 3312 aa7.75□□□□□ -1.17
SPEG-201ENST00000312358 TPRXLQ17RH7 258 aa7.74□□□□□ -1.17
SPEG-201ENST00000312358 COL6A3P12111 3177 aa7.72□□□□□ -1.17
SPEG-201ENST00000312358 LAMA3Q16787 3333 aa7.72□□□□□ -1.17
SPEG-201ENST00000312358 REV3LO60673 3130 aa7.71□□□□□ -1.18
SPEG-201ENST00000312358 MEGF8Q7Z7M0 2845 aa7.68□□□□□ -1.18
SPEG-201ENST00000312358 INE1O15225 51 aa7.68□□□□□ -1.18
SPEG-201ENST00000312358 KRTAP13-3Q3SY46 172 aa7.68□□□□□ -1.18
SPEG-201ENST00000312358 KRTAP12-2P59991 146 aa7.67□□□□□ -1.18
SPEG-201ENST00000312358 DNAH14Q0VDD8 3507 aa7.64□□□□□ -1.19
SPEG-201ENST00000312358 KRTAP13-4Q3LI77 160 aa7.62□□□□□ -1.19
SPEG-201ENST00000312358 UNC80Q8N2C7 3258 aa7.59□□□□□ -1.19
SPEG-201ENST00000312358 KRTAP15-1Q3LI76 137 aa7.58□□□□□ -1.2
SPEG-201ENST00000312358 XP32Q5T750 250 aa7.58□□□□□ -1.2
SPEG-201ENST00000312358 FBN3Q75N90 2809 aa7.56□□□□□ -1.2
SPEG-201ENST00000312358 PRO2289Q9P1D8 64 aa7.5□□□□□ -1.21
SPEG-201ENST00000312358 KRTAP1-4P0C5Y4 121 aa7.49□□□□□ -1.21
SPEG-201ENST00000312358 KRTAP12-1P59990 96 aa7.49□□□□□ -1.21
SPEG-201ENST00000312358 CDH23Q9H251 3354 aa7.49□□□□□ -1.21
SPEG-201ENST00000312358 CFAP47Q6ZTR5 3102 aa7.48□□□□□ -1.21
SPEG-201ENST00000312358 OTOGQ6ZRI0 2925 aa7.47□□□□□ -1.21
SPEG-201ENST00000312358 USP34Q70CQ2 3546 aa7.41□□□□□ -1.22
SPEG-201ENST00000312358 VCANP13611 3396 aa7.36□□□□□ -1.23
SPEG-201ENST00000312358 FBN1P35555 2871 aaKnown RBP7.32□□□□□ -1.24
SPEG-201ENST00000312358 SPTBN5Q9NRC6 3674 aaKnown RBP7.3□□□□□ -1.24
SPEG-201ENST00000312358 SZT2Q5T011 3432 aa7.27□□□□□ -1.25
SPEG-201ENST00000312358 A0A1B0GVY2 172 aa7.27□□□□□ -1.25
SPEG-201ENST00000312358 SPEGQ15772 3267 aa7.24□□□□□ -1.25
SPEG-201ENST00000312358 WDFY3Q8IZQ1 3526 aa7.22□□□□□ -1.25
SPEG-201ENST00000312358 KRTAP10-10P60014 251 aa7.21□□□□□ -1.26
SPEG-201ENST00000312358 MYO15AQ9UKN7 3530 aa7.12□□□□□ -1.27
SPEG-201ENST00000312358 KRTAP10-6P60371 365 aaPredicted RBP7.12□□□□□ -1.27
SPEG-201ENST00000312358 EYSQ5T1H1 3165 aa7.11□□□□□ -1.27
SPEG-201ENST00000312358 NBPF19A0A087WUL8 3843 aa7.09□□□□□ -1.27
SPEG-201ENST00000312358 KRTAP3-1Q9BYR8 98 aa7.08□□□□□ -1.28
SPEG-201ENST00000312358 ZFHX4Q86UP3 3567 aa6.99□□□□□ -1.29
SPEG-201ENST00000312358 SMG1Q96Q15 3661 aaKnown RBP6.95□□□□□ -1.3
SPEG-201ENST00000312358 ALMS1Q8TCU4 4167 aa6.91□□□□□ -1.3
SPEG-201ENST00000312358 LAMA5O15230 3695 aa6.89□□□□□ -1.31
SPEG-201ENST00000312358 KRTAP23-1A1A580 65 aa6.88□□□□□ -1.31
SPEG-201ENST00000312358 SPENQ96T58 3664 aaKnown RBP6.84□□□□□ -1.31
SPEG-201ENST00000312358 LOC400499M0QZD8 3231 aa6.82□□□□□ -1.32
SPEG-201ENST00000312358 KRTAP3-2Q9BYR7 98 aa6.8□□□□□ -1.32
SPEG-201ENST00000312358 ASPMQ8IZT6 3477 aa6.79□□□□□ -1.32
SPEG-201ENST00000312358 DMDP11532 3685 aa6.78□□□□□ -1.32
SPEG-201ENST00000312358 AKAP9Q99996 3911 aa6.76□□□□□ -1.33
SPEG-201ENST00000312358 CSMD1Q96PZ7 3565 aa6.71□□□□□ -1.34
SPEG-201ENST00000312358 DCHS1Q96JQ0 3298 aa6.68□□□□□ -1.34
SPEG-201ENST00000312358 KRTAP10-12P60413 245 aa6.68□□□□□ -1.34
SPEG-201ENST00000312358 VPS13CQ709C8 3753 aa6.66□□□□□ -1.34
SPEG-201ENST00000312358 KRTAP3-3Q9BYR6 98 aa6.65□□□□□ -1.34
SPEG-201ENST00000312358 RELNP78509 3460 aa6.65□□□□□ -1.35
SPEG-201ENST00000312358 TRRAPQ9Y4A5 3859 aa6.6□□□□□ -1.35
SPEG-201ENST00000312358 KRTAP12-3P60328 96 aa6.58□□□□□ -1.36
SPEG-201ENST00000312358 KRTAP21-3Q3LHN1 58 aa6.49□□□□□ -1.37
SPEG-201ENST00000312358 SVEP1Q4LDE5 3571 aa6.4□□□□□ -1.39
SPEG-201ENST00000312358 BSNQ9UPA5 3926 aa6.39□□□□□ -1.39
SPEG-201ENST00000312358 CUBNO60494 3623 aa6.39□□□□□ -1.39
SPEG-201ENST00000312358 LCE3AQ5TA76 89 aa6.37□□□□□ -1.39
SPEG-201ENST00000312358 CRCT1Q9UGL9 99 aa6.33□□□□□ -1.4
SPEG-201ENST00000312358 CSMD3Q7Z407 3707 aa6.29□□□□□ -1.4
SPEG-201ENST00000312358 KRTAP10-5P60370 271 aa6.27□□□□□ -1.41
SPEG-201ENST00000312358 DNAH3Q8TD57 4116 aa6.25□□□□□ -1.41
SPEG-201ENST00000312358 LYSTQ99698 3801 aa6.13□□□□□ -1.43
SPEG-201ENST00000312358 MUC3AQ02505 3323 aa6.1□□□□□ -1.43
SPEG-201ENST00000312358 ZNF469Q96JG9 3925 aaPredicted RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 247.6 ms