RNA–Protein interactions for RNA: ENST00000307808.10

AFF1-201, Transcript of AF4/FMR2 family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene AFF1, Length 9,390 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-201ENST00000307808 LAMA3Q16787 3333 aa7.73□□□□□ -1.17
AFF1-201ENST00000307808 DMXL1Q9Y485 3027 aa7.72□□□□□ -1.17
AFF1-201ENST00000307808 KRTAP1-1Q07627 177 aa7.72□□□□□ -1.17
AFF1-201ENST00000307808 A6NN06 94 aa7.71□□□□□ -1.18
AFF1-201ENST00000307808 A8MUU9 505 aa7.68□□□□□ -1.18
AFF1-201ENST00000307808 ATMQ13315 3056 aa7.68□□□□□ -1.18
AFF1-201ENST00000307808 NDUFAF8A1L188 74 aa7.68□□□□□ -1.18
AFF1-201ENST00000307808 DCHS2Q6V1P9 2916 aa7.67□□□□□ -1.18
AFF1-201ENST00000307808 BRCA2P51587 3418 aa7.67□□□□□ -1.18
AFF1-201ENST00000307808 KRTAP29-1A8MX34 341 aaPredicted RBP7.67□□□□□ -1.18
AFF1-201ENST00000307808 SRRM2Q9UQ35 2752 aaKnown RBP7.65□□□□□ -1.19
AFF1-201ENST00000307808 ADGRG4Q8IZF6 3080 aa7.65□□□□□ -1.19
AFF1-201ENST00000307808 KRTAP4-16G5E9R7 235 aaPredicted RBP7.64□□□□□ -1.19
AFF1-201ENST00000307808 PP632Q6XCG6 107 aa7.63□□□□□ -1.19
AFF1-201ENST00000307808 CELSR1Q9NYQ6 3014 aa7.62□□□□□ -1.19
AFF1-201ENST00000307808 TNP1P09430 55 aa7.61□□□□□ -1.19
AFF1-201ENST00000307808 ZANQ9Y493 2812 aa7.61□□□□□ -1.19
AFF1-201ENST00000307808 KRTAP1-5Q9BYS1 174 aa7.56□□□□□ -1.2
AFF1-201ENST00000307808 FBN2P35556 2912 aa7.55□□□□□ -1.2
AFF1-201ENST00000307808 LCE6AA0A183 80 aa7.55□□□□□ -1.2
AFF1-201ENST00000307808 VWFP04275 2813 aa7.54□□□□□ -1.2
AFF1-201ENST00000307808 KRTAP10-1P60331 282 aa7.54□□□□□ -1.2
AFF1-201ENST00000307808 VCANP13611 3396 aa7.54□□□□□ -1.2
AFF1-201ENST00000307808 C10orf95Q9H7T3 257 aa7.53□□□□□ -1.2
AFF1-201ENST00000307808 CDH23Q9H251 3354 aa7.53□□□□□ -1.2
AFF1-201ENST00000307808 NOTCH2NLQ7Z3S9 236 aa7.48□□□□□ -1.21
AFF1-201ENST00000307808 KRTAP10-2P60368 255 aa7.47□□□□□ -1.21
AFF1-201ENST00000307808 PKD1L1Q8TDX9 2849 aa7.46□□□□□ -1.22
AFF1-201ENST00000307808 MXRA5Q9NR99 2828 aa7.44□□□□□ -1.22
AFF1-201ENST00000307808 A8MU10 97 aa7.44□□□□□ -1.22
AFF1-201ENST00000307808 SPEGQ15772 3267 aa7.44□□□□□ -1.22
AFF1-201ENST00000307808 KRTAP11-1Q8IUC1 163 aa7.42□□□□□ -1.22
AFF1-201ENST00000307808 CFAP47Q6ZTR5 3102 aa7.42□□□□□ -1.22
AFF1-201ENST00000307808 TENM4Q6N022 2769 aa7.4□□□□□ -1.23
AFF1-201ENST00000307808 WDFY3Q8IZQ1 3526 aa7.35□□□□□ -1.23
AFF1-201ENST00000307808 Q6ZRN7 208 aaPredicted RBP7.34□□□□□ -1.23
AFF1-201ENST00000307808 TENM2Q9NT68 2774 aa7.33□□□□□ -1.24
AFF1-201ENST00000307808 SPTBN5Q9NRC6 3674 aaKnown RBP7.33□□□□□ -1.24
AFF1-201ENST00000307808 HRNRQ86YZ3 2850 aaPredicted RBP7.32□□□□□ -1.24
AFF1-201ENST00000307808 COL7A1Q02388 2944 aa7.31□□□□□ -1.24
AFF1-201ENST00000307808 NBPF19A0A087WUL8 3843 aa7.28□□□□□ -1.24
AFF1-201ENST00000307808 PRO2289Q9P1D8 64 aa7.25□□□□□ -1.25
AFF1-201ENST00000307808 EYSQ5T1H1 3165 aa7.22□□□□□ -1.25
AFF1-201ENST00000307808 KRTAP13-1Q8IUC0 172 aa7.21□□□□□ -1.26
AFF1-201ENST00000307808 MYO15AQ9UKN7 3530 aa7.2□□□□□ -1.26
AFF1-201ENST00000307808 P0C880 135 aa7.19□□□□□ -1.26
AFF1-201ENST00000307808 SZT2Q5T011 3432 aa7.18□□□□□ -1.26
AFF1-201ENST00000307808 KRTAP13-2Q52LG2 175 aa7.16□□□□□ -1.26
AFF1-201ENST00000307808 KRTAP10-8P60410 259 aa7.16□□□□□ -1.26
AFF1-201ENST00000307808 LAMA5O15230 3695 aa7.15□□□□□ -1.27
AFF1-201ENST00000307808 ASPMQ8IZT6 3477 aa7.14□□□□□ -1.27
AFF1-201ENST00000307808 ZFHX4Q86UP3 3567 aa7.12□□□□□ -1.27
AFF1-201ENST00000307808 H0YAA0 97 aa7.09□□□□□ -1.27
AFF1-201ENST00000307808 SPENQ96T58 3664 aaKnown RBP7.07□□□□□ -1.28
AFF1-201ENST00000307808 ZFHX3Q15911 3703 aa7.04□□□□□ -1.28
AFF1-201ENST00000307808 SMG1Q96Q15 3661 aaKnown RBP7.01□□□□□ -1.29
AFF1-201ENST00000307808 KRTAP7-1Q8IUC3 87 aa6.99□□□□□ -1.29
AFF1-201ENST00000307808 MEGF8Q7Z7M0 2845 aa6.99□□□□□ -1.29
AFF1-201ENST00000307808 TPRXLQ17RH7 258 aa6.97□□□□□ -1.29
AFF1-201ENST00000307808 RELNP78509 3460 aa6.95□□□□□ -1.3
AFF1-201ENST00000307808 XP32Q5T750 250 aa6.95□□□□□ -1.3
AFF1-201ENST00000307808 LOC400499M0QZD8 3231 aa6.93□□□□□ -1.3
AFF1-201ENST00000307808 DMDP11532 3685 aa6.93□□□□□ -1.3
AFF1-201ENST00000307808 FBN1P35555 2871 aaKnown RBP6.83□□□□□ -1.32
AFF1-201ENST00000307808 KRTAP10-10P60014 251 aa6.83□□□□□ -1.32
AFF1-201ENST00000307808 KRTAP21-3Q3LHN1 58 aa6.82□□□□□ -1.32
AFF1-201ENST00000307808 VPS13CQ709C8 3753 aa6.75□□□□□ -1.33
AFF1-201ENST00000307808 FBN3Q75N90 2809 aa6.74□□□□□ -1.33
AFF1-201ENST00000307808 AKAP9Q99996 3911 aa6.74□□□□□ -1.33
AFF1-201ENST00000307808 KRTAP1-4P0C5Y4 121 aa6.73□□□□□ -1.33
AFF1-201ENST00000307808 CSMD1Q96PZ7 3565 aa6.71□□□□□ -1.34
AFF1-201ENST00000307808 KRTAP13-4Q3LI77 160 aa6.71□□□□□ -1.34
AFF1-201ENST00000307808 A0A1B0GVY2 172 aa6.7□□□□□ -1.34
AFF1-201ENST00000307808 OTOGQ6ZRI0 2925 aa6.69□□□□□ -1.34
AFF1-201ENST00000307808 DCHS1Q96JQ0 3298 aa6.67□□□□□ -1.34
AFF1-201ENST00000307808 KRTAP13-3Q3SY46 172 aa6.65□□□□□ -1.35
AFF1-201ENST00000307808 KRTAP12-2P59991 146 aa6.6□□□□□ -1.35
AFF1-201ENST00000307808 TRRAPQ9Y4A5 3859 aa6.6□□□□□ -1.35
AFF1-201ENST00000307808 INE1O15225 51 aa6.59□□□□□ -1.35
AFF1-201ENST00000307808 CUBNO60494 3623 aa6.48□□□□□ -1.37
AFF1-201ENST00000307808 KRTAP15-1Q3LI76 137 aa6.44□□□□□ -1.38
AFF1-201ENST00000307808 KRTAP12-1P59990 96 aa6.44□□□□□ -1.38
AFF1-201ENST00000307808 SVEP1Q4LDE5 3571 aa6.43□□□□□ -1.38
AFF1-201ENST00000307808 KRTAP23-1A1A580 65 aa6.39□□□□□ -1.39
AFF1-201ENST00000307808 CSMD3Q7Z407 3707 aa6.36□□□□□ -1.39
AFF1-201ENST00000307808 MUC3AQ02505 3323 aa6.34□□□□□ -1.39
AFF1-201ENST00000307808 LYSTQ99698 3801 aa6.18□□□□□ -1.42
AFF1-201ENST00000307808 BSNQ9UPA5 3926 aa6.16□□□□□ -1.42
AFF1-201ENST00000307808 CSMD2Q7Z408 3487 aa6.16□□□□□ -1.42
AFF1-201ENST00000307808 KRTAP10-12P60413 245 aa6.1□□□□□ -1.43
AFF1-201ENST00000307808 KRTAP10-6P60371 365 aaPredicted RBP6.02□□□□□ -1.45
AFF1-201ENST00000307808 ALMS1Q8TCU4 4167 aa6.02□□□□□ -1.45
AFF1-201ENST00000307808 CMYA5Q8N3K9 4069 aa6.01□□□□□ -1.45
AFF1-201ENST00000307808 KRTAP3-1Q9BYR8 98 aa6□□□□□ -1.45
AFF1-201ENST00000307808 KRTAP12-3P60328 96 aa5.87□□□□□ -1.47
AFF1-201ENST00000307808 DNAH7Q8WXX0 4024 aa5.86□□□□□ -1.47
AFF1-201ENST00000307808 ZNF469Q96JG9 3925 aaPredicted RBP5.85□□□□□ -1.47
AFF1-201ENST00000307808 DNAH3Q8TD57 4116 aa5.84□□□□□ -1.47
AFF1-201ENST00000307808 CRCT1Q9UGL9 99 aa5.81□□□□□ -1.48
AFF1-201ENST00000307808 ANK2Q01484 3957 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms