RNA–Protein interactions for RNA: snR11

snR11, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR11, Length 258 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR11snR11 HTA2P04912 132 aa8.11□□□□□ -1.11
snR11snR11 VPS70P47161 811 aa8.1□□□□□ -1.11
snR11snR11 NST1P53935 1240 aa8.1□□□□□ -1.11
snR11snR11 SOL3P38858 249 aa8.09□□□□□ -1.11
snR11snR11 YGR273CP53329 174 aa8.06□□□□□ -1.12
snR11snR11 YEL023CP39992 682 aa8.05□□□□□ -1.12
snR11snR11 LDB19Q12502 818 aa8.05□□□□□ -1.12
snR11snR11 FKH1P40466 484 aa8.02□□□□□ -1.13
snR11snR11 CKB1P43639 278 aa8.02□□□□□ -1.13
snR11snR11 YNL035CP53962 389 aaKnown RBP8.02□□□□□ -1.13
snR11snR11 JIP4Q03361 876 aa8.02□□□□□ -1.13
snR11snR11 DAN4P47179 1161 aa8.01□□□□□ -1.13
snR11snR11 ILV3P39522 585 aaKnown RBP8□□□□□ -1.13
snR11snR11 AI4P03878 556 aa7.99□□□□□ -1.13
snR11snR11 SIS1P25294 352 aaKnown RBP7.99□□□□□ -1.13
snR11snR11 RTG1P32607 177 aa7.99□□□□□ -1.13
snR11snR11 PTC4P38089 393 aa7.99□□□□□ -1.13
snR11snR11 MPH3P0CE00 602 aa7.98□□□□□ -1.13
snR11snR11 REF2P42073 533 aaPredicted RBP7.98□□□□□ -1.13
snR11snR11 UBP14P38237 781 aaKnown RBP7.97□□□□□ -1.13
snR11snR11 YLR326WQ06170 240 aaKnown RBP7.97□□□□□ -1.13
snR11snR11 SEC61P32915 480 aa7.96□□□□□ -1.14
snR11snR11 VHR2P40041 505 aa7.96□□□□□ -1.14
snR11snR11 KEX1P09620 729 aa7.95□□□□□ -1.14
snR11snR11 AIR2Q12476 344 aaKnown RBP7.95□□□□□ -1.14
snR11snR11 YDR090CQ03193 310 aa7.93□□□□□ -1.14
snR11snR11 PBS2P08018 668 aa7.91□□□□□ -1.14
snR11snR11 MAK21Q12176 1025 aaKnown RBP7.91□□□□□ -1.14
snR11snR11 DSF2P38213 736 aa7.9□□□□□ -1.14
snR11snR11 PCS60P38137 543 aaKnown RBP RIP-Chip data7.88□□□□□ -1.15not detected
snR11snR11 NCR1Q12200 1170 aa7.88□□□□□ -1.15
snR11snR11 RAD54P32863 898 aa7.87□□□□□ -1.15
snR11snR11 COX6P00427 148 aa7.86□□□□□ -1.15
snR11snR11 SLI15P38283 698 aa7.85□□□□□ -1.15
snR11snR11 PML39Q03760 334 aa7.85□□□□□ -1.15
snR11snR11 YDL129WQ07555 291 aa7.85□□□□□ -1.15
snR11snR11 SPB4P25808 606 aaPredicted RBP7.83□□□□□ -1.16
snR11snR11 TFG1P41895 735 aaPredicted RBP7.83□□□□□ -1.16
snR11snR11 LEU3P08638 886 aa7.82□□□□□ -1.16
snR11snR11 MID1P41821 548 aa7.82□□□□□ -1.16
snR11snR11 MAM3Q12296 706 aa7.81□□□□□ -1.16
snR11snR11 KIC1P38692 1080 aa7.8□□□□□ -1.16
snR11snR11 IES2P40154 320 aa7.78□□□□□ -1.16
snR11snR11 SAP30P38429 201 aa7.77□□□□□ -1.17
snR11snR11 ORC6P38826 435 aa7.77□□□□□ -1.17
snR11snR11 MPC54Q08550 464 aa7.77□□□□□ -1.17
snR11snR11 BMT6Q12291 365 aa7.77□□□□□ -1.17
snR11snR11 YJL171CP46992 396 aa7.75□□□□□ -1.17
snR11snR11 NUP42P49686 430 aaKnown RBP7.75□□□□□ -1.17
snR11snR11 CDC73Q06697 393 aa7.74□□□□□ -1.17
snR11snR11 GAP1P19145 602 aaPredicted RBP7.73□□□□□ -1.17
snR11snR11 PEX29Q03370 554 aa7.73□□□□□ -1.17
snR11snR11 YDR344CQ05510 147 aa7.73□□□□□ -1.17
snR11snR11 DPL1Q05567 589 aa7.73□□□□□ -1.17
snR11snR11 ARH1P48360 493 aa7.7□□□□□ -1.18
snR11snR11 RPP1BP10622 106 aaKnown RBP7.69□□□□□ -1.18
snR11snR11 DIT2P21595 489 aa7.68□□□□□ -1.18
snR11snR11 PSE1P32337 1089 aaKnown RBP7.67□□□□□ -1.18
snR11snR11 CSC1Q06538 782 aa7.67□□□□□ -1.18
snR11snR11 YNR021WP53723 404 aaKnown RBP7.66□□□□□ -1.18
snR11snR11 NMA111P53920 997 aa7.66□□□□□ -1.18
snR11snR11 PRE3P38624 215 aa7.65□□□□□ -1.18
snR11snR11 HAP5Q02516 242 aa7.65□□□□□ -1.18
snR11snR11 TFB4Q12004 338 aa7.64□□□□□ -1.19
snR11snR11 ISU2Q12056 156 aa7.64□□□□□ -1.19
snR11snR11 RGR1P19263 1082 aa7.63□□□□□ -1.19
snR11snR11 MVP1P40959 511 aaKnown RBP7.63□□□□□ -1.19
snR11snR11 ELP4Q02884 456 aaKnown RBP7.62□□□□□ -1.19
snR11snR11 CHL1P22516 861 aaPredicted RBP7.61□□□□□ -1.19
snR11snR11 BNI4P53858 892 aa7.61□□□□□ -1.19
snR11snR11 GLC3P32775 704 aa7.6□□□□□ -1.19
snR11snR11 RPN1P38764 993 aaKnown RBP7.59□□□□□ -1.19
snR11snR11 SPT23P35210 1082 aa7.58□□□□□ -1.2
snR11snR11 PEX21P50091 288 aa7.58□□□□□ -1.2
snR11snR11 AIM7Q12156 149 aa7.57□□□□□ -1.2
snR11snR11 TUM1Q08686 304 aaKnown RBP7.56□□□□□ -1.2
snR11snR11 CLB5P30283 435 aa7.55□□□□□ -1.2
snR11snR11 YPR109WQ06104 294 aa7.55□□□□□ -1.2
snR11snR11 YRR1Q12172 810 aa7.55□□□□□ -1.2
snR11snR11 PDR1P12383 1068 aa7.54□□□□□ -1.2
snR11snR11 RAM1P22007 431 aa7.54□□□□□ -1.2
snR11snR11 LEO1P38439 464 aa7.52□□□□□ -1.21
snR11snR11 YML082WQ04533 649 aaKnown RBP7.52□□□□□ -1.21
snR11snR11 PTC2P39966 464 aaKnown RBP7.51□□□□□ -1.21
snR11snR11 ATF2P53296 535 aa7.51□□□□□ -1.21
snR11snR11 YPR015CQ12531 247 aa7.51□□□□□ -1.21
snR11snR11 TEA1P47988 759 aa7.5□□□□□ -1.21
snR11snR11 NUD1P32336 851 aa7.49□□□□□ -1.21
snR11snR11 KIN1P13185 1064 aa7.48□□□□□ -1.21
snR11snR11 STR2P47164 639 aa7.47□□□□□ -1.21
snR11snR11 ISM1P48526 1002 aa7.45□□□□□ -1.22
snR11snR11 NIS1P53939 407 aa7.45□□□□□ -1.22
snR11snR11 SIT4P20604 311 aa7.44□□□□□ -1.22
snR11snR11 BCK2P33306 851 aa7.43□□□□□ -1.22
snR11snR11 BUD20Q08004 166 aaPredicted RBP7.42□□□□□ -1.22
snR11snR11 TY1A-DR4O74302 440 aa7.41□□□□□ -1.22
snR11snR11 TY1A-HP0C2I4 478 aaKnown RBP7.41□□□□□ -1.22
snR11snR11 TY1A-AP0CX57 440 aa7.41□□□□□ -1.22
snR11snR11 TY1A-PR1P0CX58 440 aa7.41□□□□□ -1.22
snR11snR11 TY1A-ORP0CX59 440 aa7.41□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms