RNA–Protein interactions for RNA: YLR411W

CTR3, Transcript of High-affinity copper transporter of the plasma membrane, yeastyeast

Gene CTR3, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTR3YLR411W ULI1P43604 169 aa10.07□□□□□ -0.8
CTR3YLR411W TRP5P00931 707 aaKnown RBP10.05□□□□□ -0.8
CTR3YLR411W SOL3P38858 249 aa10.05□□□□□ -0.8
CTR3YLR411W YGR273CP53329 174 aa10.02□□□□□ -0.81
CTR3YLR411W IOC2Q12072 812 aa10.02□□□□□ -0.81
CTR3YLR411W NST1P53935 1240 aa10.01□□□□□ -0.81
CTR3YLR411W REF2P42073 533 aaPredicted RBP10□□□□□ -0.81
CTR3YLR411W YEL023CP39992 682 aa9.98□□□□□ -0.81
CTR3YLR411W UBP14P38237 781 aaKnown RBP9.95□□□□□ -0.82
CTR3YLR411W PTC4P38089 393 aa9.94□□□□□ -0.82
CTR3YLR411W VHR2P40041 505 aa9.94□□□□□ -0.82
CTR3YLR411W JIP4Q03361 876 aa9.94□□□□□ -0.82
CTR3YLR411W LDB19Q12502 818 aa9.94□□□□□ -0.82
CTR3YLR411W PBS2P08018 668 aa9.93□□□□□ -0.82
CTR3YLR411W SPB4P25808 606 aaPredicted RBP9.93□□□□□ -0.82
CTR3YLR411W YLR326WQ06170 240 aaKnown RBP9.93□□□□□ -0.82
CTR3YLR411W MPH3P0CE00 602 aa9.92□□□□□ -0.82
CTR3YLR411W AI4P03878 556 aa9.91□□□□□ -0.82
CTR3YLR411W DAN4P47179 1161 aa9.91□□□□□ -0.82
CTR3YLR411W YNL035CP53962 389 aaKnown RBP9.91□□□□□ -0.82
CTR3YLR411W KEX1P09620 729 aa9.9□□□□□ -0.82
CTR3YLR411W DSF2P38213 736 aa9.89□□□□□ -0.83
CTR3YLR411W ILV3P39522 585 aaKnown RBP9.89□□□□□ -0.83
CTR3YLR411W YDR090CQ03193 310 aa9.89□□□□□ -0.83
CTR3YLR411W RTG1P32607 177 aa9.88□□□□□ -0.83
CTR3YLR411W MAK21Q12176 1025 aaKnown RBP9.88□□□□□ -0.83
CTR3YLR411W COX6P00427 148 aa9.86□□□□□ -0.83
CTR3YLR411W LEU3P08638 886 aa9.86□□□□□ -0.83
CTR3YLR411W SEC61P32915 480 aa9.85□□□□□ -0.83
CTR3YLR411W SIS1P25294 352 aaKnown RBP9.83□□□□□ -0.84
CTR3YLR411W PCS60P38137 543 aaKnown RBP RIP-Chip data9.83□□□□□ -0.84not detected
CTR3YLR411W FKH1P40466 484 aa9.83□□□□□ -0.84
CTR3YLR411W RAD54P32863 898 aa9.82□□□□□ -0.84
CTR3YLR411W MAM3Q12296 706 aa9.8□□□□□ -0.84
CTR3YLR411W KIC1P38692 1080 aa9.79□□□□□ -0.84
CTR3YLR411W NCR1Q12200 1170 aa9.79□□□□□ -0.84
CTR3YLR411W AIR2Q12476 344 aaKnown RBP9.77□□□□□ -0.85
CTR3YLR411W SLI15P38283 698 aa9.76□□□□□ -0.85
CTR3YLR411W IES2P40154 320 aa9.75□□□□□ -0.85
CTR3YLR411W PML39Q03760 334 aa9.75□□□□□ -0.85
CTR3YLR411W TFG1P41895 735 aaPredicted RBP9.73□□□□□ -0.85
CTR3YLR411W MID1P41821 548 aa9.72□□□□□ -0.85
CTR3YLR411W NUP42P49686 430 aaKnown RBP9.71□□□□□ -0.86
CTR3YLR411W YDL129WQ07555 291 aa9.71□□□□□ -0.86
CTR3YLR411W DIT2P21595 489 aa9.67□□□□□ -0.86
CTR3YLR411W ORC6P38826 435 aa9.66□□□□□ -0.86
CTR3YLR411W YNR021WP53723 404 aaKnown RBP9.64□□□□□ -0.87
CTR3YLR411W CDC73Q06697 393 aa9.64□□□□□ -0.87
CTR3YLR411W SAP30P38429 201 aa9.63□□□□□ -0.87
CTR3YLR411W MPC54Q08550 464 aa9.63□□□□□ -0.87
CTR3YLR411W LEO1P38439 464 aa9.62□□□□□ -0.87
CTR3YLR411W RPN1P38764 993 aaKnown RBP9.62□□□□□ -0.87
CTR3YLR411W RPP1BP10622 106 aaKnown RBP9.61□□□□□ -0.87
CTR3YLR411W GAP1P19145 602 aaPredicted RBP9.61□□□□□ -0.87
CTR3YLR411W DPL1Q05567 589 aa9.61□□□□□ -0.87
CTR3YLR411W PSE1P32337 1089 aaKnown RBP9.6□□□□□ -0.87
CTR3YLR411W PEX29Q03370 554 aa9.6□□□□□ -0.87
CTR3YLR411W YJL171CP46992 396 aa9.59□□□□□ -0.87
CTR3YLR411W BMT6Q12291 365 aa9.59□□□□□ -0.87
CTR3YLR411W GLC3P32775 704 aa9.56□□□□□ -0.88
CTR3YLR411W CSC1Q06538 782 aa9.56□□□□□ -0.88
CTR3YLR411W RGR1P19263 1082 aa9.55□□□□□ -0.88
CTR3YLR411W MVP1P40959 511 aaKnown RBP9.54□□□□□ -0.88
CTR3YLR411W NMA111P53920 997 aa9.54□□□□□ -0.88
CTR3YLR411W ARH1P48360 493 aa9.53□□□□□ -0.88
CTR3YLR411W YDR344CQ05510 147 aa9.53□□□□□ -0.88
CTR3YLR411W TFB4Q12004 338 aa9.52□□□□□ -0.89
CTR3YLR411W ISU2Q12056 156 aa9.52□□□□□ -0.89
CTR3YLR411W AIM7Q12156 149 aa9.51□□□□□ -0.89
CTR3YLR411W PEX21P50091 288 aa9.49□□□□□ -0.89
CTR3YLR411W ATF2P53296 535 aa9.49□□□□□ -0.89
CTR3YLR411W HAP5Q02516 242 aa9.49□□□□□ -0.89
CTR3YLR411W ELP4Q02884 456 aaKnown RBP9.47□□□□□ -0.89
CTR3YLR411W YPR109WQ06104 294 aa9.46□□□□□ -0.9
CTR3YLR411W KIN1P13185 1064 aa9.44□□□□□ -0.9
CTR3YLR411W PRE3P38624 215 aa9.44□□□□□ -0.9
CTR3YLR411W TUM1Q08686 304 aaKnown RBP9.44□□□□□ -0.9
CTR3YLR411W CLB5P30283 435 aa9.43□□□□□ -0.9
CTR3YLR411W YRR1Q12172 810 aa9.43□□□□□ -0.9
CTR3YLR411W TEA1P47988 759 aa9.42□□□□□ -0.9
CTR3YLR411W CHL1P22516 861 aaPredicted RBP9.41□□□□□ -0.9
CTR3YLR411W SPT23P35210 1082 aa9.41□□□□□ -0.9
CTR3YLR411W BNI4P53858 892 aa9.41□□□□□ -0.9
CTR3YLR411W PDR1P12383 1068 aa9.38□□□□□ -0.91
CTR3YLR411W RAM1P22007 431 aa9.33□□□□□ -0.92
CTR3YLR411W PTC2P39966 464 aaKnown RBP9.33□□□□□ -0.92
CTR3YLR411W NUD1P32336 851 aa9.32□□□□□ -0.92
CTR3YLR411W NIS1P53939 407 aa9.32□□□□□ -0.92
CTR3YLR411W YML082WQ04533 649 aaKnown RBP9.31□□□□□ -0.92
CTR3YLR411W SIT4P20604 311 aa9.28□□□□□ -0.92
CTR3YLR411W STR2P47164 639 aa9.28□□□□□ -0.92
CTR3YLR411W FPK1P53739 893 aa9.28□□□□□ -0.92
CTR3YLR411W YPR015CQ12531 247 aa9.28□□□□□ -0.92
CTR3YLR411W ISM1P48526 1002 aa9.27□□□□□ -0.93
CTR3YLR411W NPL4P33755 580 aa9.25□□□□□ -0.93
CTR3YLR411W GUA1P38625 525 aaKnown RBP9.25□□□□□ -0.93
CTR3YLR411W YMR196WQ04336 1088 aa9.25□□□□□ -0.93
CTR3YLR411W CSN12P47130 423 aa9.24□□□□□ -0.93
CTR3YLR411W HST2P53686 357 aa9.24□□□□□ -0.93
CTR3YLR411W KEX2P13134 814 aa9.22□□□□□ -0.93
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms