RNA–Protein interactions for RNA: YLR353W

BUD8, Transcript of Protein involved in bud-site selection, yeastyeast

Gene BUD8, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD8YLR353W YPK9Q12697 1472 aa8.14□□□□□ -1.11
BUD8YLR353W PDR15Q04182 1529 aaKnown RBP8.14□□□□□ -1.11
BUD8YLR353W VPS15P22219 1454 aa8.12□□□□□ -1.11
BUD8YLR353W PAN1P32521 1480 aa8.12□□□□□ -1.11
BUD8YLR353W RAM2P29703 316 aa8.08□□□□□ -1.12
BUD8YLR353W YCK3P39962 524 aa8.08□□□□□ -1.12
BUD8YLR353W TY2B-LR1P0C2J3 1770 aa8.07□□□□□ -1.12
BUD8YLR353W TY2B-FP0CX63 1770 aa8.07□□□□□ -1.12
BUD8YLR353W TY2B-GR2P0CX64 1770 aa8.07□□□□□ -1.12
BUD8YLR353W TY2B-CP25384 1770 aa8.07□□□□□ -1.12
BUD8YLR353W TY2B-DR2Q03494 1770 aa8.07□□□□□ -1.12
BUD8YLR353W TY1B-DR1Q03855 1755 aa8.07□□□□□ -1.12
BUD8YLR353W TY2B-DR3Q07791 1770 aaKnown RBP8.07□□□□□ -1.12
BUD8YLR353W TY2B-OR1Q12113 1770 aa8.07□□□□□ -1.12
BUD8YLR353W TY2B-DR1Q12472 1770 aa8.07□□□□□ -1.12
BUD8YLR353W TY2B-OR2Q12501 1770 aa8.07□□□□□ -1.12
BUD8YLR353W HAA1Q12753 694 aaKnown RBP8.07□□□□□ -1.12
BUD8YLR353W RRD1P40454 393 aaKnown RBP8.06□□□□□ -1.12
BUD8YLR353W EPS1P40557 701 aa8.05□□□□□ -1.12
BUD8YLR353W DOP1Q03921 1698 aa8.01□□□□□ -1.13
BUD8YLR353W MRM1P25270 412 aa8.01□□□□□ -1.13
BUD8YLR353W SET1P38827 1080 aaKnown RBP8.01□□□□□ -1.13
BUD8YLR353W BDF1P35817 686 aa7.99□□□□□ -1.13
BUD8YLR353W RPN1P38764 993 aaKnown RBP7.99□□□□□ -1.13
BUD8YLR353W YPR148CQ06523 435 aa7.99□□□□□ -1.13
BUD8YLR353W TY1B-HO13535 1793 aa7.98□□□□□ -1.13
BUD8YLR353W TY1B-DR5P0C2I2 1755 aa7.98□□□□□ -1.13
BUD8YLR353W TY1B-DR6P0C2I3 1755 aa7.98□□□□□ -1.13
BUD8YLR353W TY1B-LR2P0C2I5 1755 aa7.98□□□□□ -1.13
BUD8YLR353W TY1B-LR3P0C2I6 1755 aaKnown RBP7.98□□□□□ -1.13
BUD8YLR353W TY1B-PR1P0C2I9 1755 aaKnown RBP7.98□□□□□ -1.13
BUD8YLR353W TY1B-PR2P0C2J0 1756 aa7.98□□□□□ -1.13
BUD8YLR353W TY1B-PR3P0C2J1 1755 aaKnown RBP7.98□□□□□ -1.13
BUD8YLR353W TY1B-JR1P47098 1755 aa7.98□□□□□ -1.13
BUD8YLR353W TY1B-ML2Q03434 1755 aaKnown RBP7.98□□□□□ -1.13
BUD8YLR353W TY1B-ER1Q03612 1755 aa7.98□□□□□ -1.13
BUD8YLR353W TY1B-ML1Q04711 1755 aaKnown RBP7.98□□□□□ -1.13
BUD8YLR353W TY1B-GR2Q12269 1755 aa7.98□□□□□ -1.13
BUD8YLR353W TY1B-OLQ12273 1755 aa7.98□□□□□ -1.13
BUD8YLR353W TY1B-PLQ12414 1755 aaKnown RBP7.98□□□□□ -1.13
BUD8YLR353W RCR1P38212 213 aa7.96□□□□□ -1.13
BUD8YLR353W CKB1P43639 278 aa7.96□□□□□ -1.13
BUD8YLR353W SIN3P22579 1536 aa7.96□□□□□ -1.13
BUD8YLR353W NUP170P38181 1502 aa7.96□□□□□ -1.13
BUD8YLR353W SCC2Q04002 1493 aa7.95□□□□□ -1.14
BUD8YLR353W IFH1P39520 1085 aa7.95□□□□□ -1.14
BUD8YLR353W GLN1P32288 370 aaKnown RBP7.94□□□□□ -1.14
BUD8YLR353W RTG3P38165 486 aa7.94□□□□□ -1.14
BUD8YLR353W NUP159P40477 1460 aa7.92□□□□□ -1.14
BUD8YLR353W VPS70P47161 811 aa7.92□□□□□ -1.14
BUD8YLR353W TRM732Q03496 1420 aa7.92□□□□□ -1.14
BUD8YLR353W TY2B-BQ12491 1770 aa7.91□□□□□ -1.14
BUD8YLR353W MAK11P20484 414 aaKnown RBP7.91□□□□□ -1.14
BUD8YLR353W SPB4P25808 606 aaPredicted RBP7.91□□□□□ -1.14
BUD8YLR353W SCY1P53009 804 aa7.91□□□□□ -1.14
BUD8YLR353W SPO14P36126 1683 aa7.88□□□□□ -1.15
BUD8YLR353W DNF3Q12674 1656 aa7.87□□□□□ -1.15
BUD8YLR353W UBP10P53874 792 aaPredicted RBP7.86□□□□□ -1.15
BUD8YLR353W MAP2P38174 421 aaKnown RBP7.82□□□□□ -1.16
BUD8YLR353W DMA2P53924 522 aa7.82□□□□□ -1.16
BUD8YLR353W VPS29P38759 282 aa7.82□□□□□ -1.16
BUD8YLR353W DSF2P38213 736 aa7.8□□□□□ -1.16
BUD8YLR353W USO1P25386 1790 aa7.79□□□□□ -1.16
BUD8YLR353W COQ8P27697 501 aa7.79□□□□□ -1.16
BUD8YLR353W NOP53Q12080 455 aaKnown RBP7.78□□□□□ -1.16
BUD8YLR353W TY1B-DR3Q99231 1755 aa7.77□□□□□ -1.17
BUD8YLR353W MMS22Q06164 1454 aa7.77□□□□□ -1.17
BUD8YLR353W PBS2P08018 668 aa7.76□□□□□ -1.17
BUD8YLR353W RPO21P04050 1733 aaKnown RBP7.76□□□□□ -1.17
BUD8YLR353W TY1B-JR2P47100 1755 aaKnown RBP7.75□□□□□ -1.17
BUD8YLR353W TY1B-ER2Q03619 1755 aa7.75□□□□□ -1.17
BUD8YLR353W TY1B-MR1Q04214 1755 aa7.75□□□□□ -1.17
BUD8YLR353W TY1B-MR2Q04670 1755 aaKnown RBP7.75□□□□□ -1.17
BUD8YLR353W TY1B-LR1Q12088 1755 aaKnown RBP7.75□□□□□ -1.17
BUD8YLR353W TY1B-NL1Q12112 1755 aa7.75□□□□□ -1.17
BUD8YLR353W TY1B-GR1Q12141 1755 aa7.75□□□□□ -1.17
BUD8YLR353W TY1B-BLQ12490 1755 aa7.75□□□□□ -1.17
BUD8YLR353W PDR10P51533 1564 aa7.75□□□□□ -1.17
BUD8YLR353W SLX5P32828 619 aaKnown RBP7.73□□□□□ -1.17
BUD8YLR353W YMR1P47147 688 aaKnown RBP RIP-Chip data7.73□□□□□ -1.17not detected
BUD8YLR353W YGL015CP33199 130 aa7.71□□□□□ -1.17
BUD8YLR353W YNR021WP53723 404 aaKnown RBP7.71□□□□□ -1.18
BUD8YLR353W ARO1P08566 1588 aaKnown RBP7.7□□□□□ -1.18
BUD8YLR353W ULS1Q08562 1619 aa7.7□□□□□ -1.18
BUD8YLR353W STS1P38637 319 aa7.69□□□□□ -1.18
BUD8YLR353W EDS1P38073 919 aa7.68□□□□□ -1.18
BUD8YLR353W REF2P42073 533 aaPredicted RBP7.68□□□□□ -1.18
BUD8YLR353W MAM3Q12296 706 aa7.66□□□□□ -1.18
BUD8YLR353W DBP1P24784 617 aaKnown RBP7.66□□□□□ -1.18
BUD8YLR353W TRM3Q07527 1436 aa7.65□□□□□ -1.18
BUD8YLR353W KIN1P13185 1064 aa7.65□□□□□ -1.18
BUD8YLR353W SPP41P38904 1435 aa7.63□□□□□ -1.19
BUD8YLR353W AIM7Q12156 149 aa7.63□□□□□ -1.19
BUD8YLR353W RLF2Q12495 606 aa7.63□□□□□ -1.19
BUD8YLR353W IES2P40154 320 aa7.62□□□□□ -1.19
BUD8YLR353W YOR238WQ08634 303 aa7.61□□□□□ -1.19
BUD8YLR353W MAK21Q12176 1025 aaKnown RBP7.61□□□□□ -1.19
BUD8YLR353W GLC3P32775 704 aa7.6□□□□□ -1.19
BUD8YLR353W NUP42P49686 430 aaKnown RBP7.6□□□□□ -1.19
BUD8YLR353W PTC3P34221 468 aaKnown RBP7.59□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms