RNA–Protein interactions for RNA: YLR241W

CSC1, Transcript of Calcium permeable gated cation channel, yeastyeast

Gene CSC1, Length 2,349 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSC1YLR241W POL1P13382 1468 aa7.59□□□□□ -1.19
CSC1YLR241W YPP1P46951 817 aa7.58□□□□□ -1.2
CSC1YLR241W NOP53Q12080 455 aaKnown RBP7.58□□□□□ -1.2
CSC1YLR241W NST1P53935 1240 aa7.57□□□□□ -1.2
CSC1YLR241W MYO4P32492 1471 aa7.56□□□□□ -1.2
CSC1YLR241W SMC4Q12267 1418 aa7.55□□□□□ -1.2
CSC1YLR241W SIN3P22579 1536 aa7.54□□□□□ -1.2
CSC1YLR241W DEF1P35732 738 aaKnown RBP7.54□□□□□ -1.2
CSC1YLR241W TSC11P40061 1430 aa7.54□□□□□ -1.2
CSC1YLR241W RLF2Q12495 606 aa7.53□□□□□ -1.2
CSC1YLR241W ESP1Q03018 1630 aa7.52□□□□□ -1.21
CSC1YLR241W KOG1P38873 1557 aa7.52□□□□□ -1.21
CSC1YLR241W YRB30P53107 440 aaPredicted RBP7.52□□□□□ -1.21
CSC1YLR241W YPK9Q12697 1472 aa7.51□□□□□ -1.21
CSC1YLR241W PCT1P13259 424 aa7.51□□□□□ -1.21
CSC1YLR241W KIP3P53086 805 aaKnown RBP7.51□□□□□ -1.21
CSC1YLR241W DNA2P38859 1522 aa7.51□□□□□ -1.21
CSC1YLR241W NOP58Q12499 511 aaKnown RBP7.5□□□□□ -1.21
CSC1YLR241W SNQ2P32568 1501 aaKnown RBP7.5□□□□□ -1.21
CSC1YLR241W KNS1P32350 737 aaPredicted RBP7.49□□□□□ -1.21
CSC1YLR241W PSH1Q12161 406 aa7.49□□□□□ -1.21
CSC1YLR241W MHP1P43638 1398 aa7.48□□□□□ -1.21
CSC1YLR241W GEA1P47102 1408 aaPredicted RBP7.47□□□□□ -1.21
CSC1YLR241W CLB5P30283 435 aa7.46□□□□□ -1.21
CSC1YLR241W YIR014WP40570 242 aa7.46□□□□□ -1.21
CSC1YLR241W SPC110P32380 944 aa7.46□□□□□ -1.22
CSC1YLR241W RVB2Q12464 471 aaKnown RBP7.46□□□□□ -1.22
CSC1YLR241W PDR15Q04182 1529 aaKnown RBP7.45□□□□□ -1.22
CSC1YLR241W IRC20Q06554 1556 aa7.44□□□□□ -1.22
CSC1YLR241W SWR1Q05471 1514 aa7.44□□□□□ -1.22
CSC1YLR241W MSP1P28737 362 aa7.44□□□□□ -1.22
CSC1YLR241W GCN2P15442 1659 aa7.43□□□□□ -1.22
CSC1YLR241W RKR1Q04781 1562 aa7.43□□□□□ -1.22
CSC1YLR241W SPT2P06843 333 aaPredicted RBP7.43□□□□□ -1.22
CSC1YLR241W NOT3P06102 836 aaKnown RBP7.43□□□□□ -1.22
CSC1YLR241W ARL1P38116 183 aaKnown RBP7.43□□□□□ -1.22
CSC1YLR241W YOR1P53049 1477 aa7.42□□□□□ -1.22
CSC1YLR241W DOS2P54858 310 aa7.42□□□□□ -1.22
CSC1YLR241W EDE1P34216 1381 aa7.42□□□□□ -1.22
CSC1YLR241W SMC3P47037 1230 aa7.41□□□□□ -1.22
CSC1YLR241W NUP159P40477 1460 aa7.41□□□□□ -1.22
CSC1YLR241W DNF1P32660 1571 aa7.4□□□□□ -1.22
CSC1YLR241W MSH3P25336 1018 aa7.4□□□□□ -1.23
CSC1YLR241W ABP1P15891 592 aaKnown RBP7.39□□□□□ -1.23
CSC1YLR241W SIC1P38634 284 aa7.39□□□□□ -1.23
CSC1YLR241W VPS24P36095 224 aaKnown RBP7.39□□□□□ -1.23
CSC1YLR241W TY3B-GQ99315 1547 aa7.39□□□□□ -1.23
CSC1YLR241W VPS15P22219 1454 aa7.38□□□□□ -1.23
CSC1YLR241W DSN1P40568 576 aa7.37□□□□□ -1.23
CSC1YLR241W SPB4P25808 606 aaPredicted RBP7.36□□□□□ -1.23
CSC1YLR241W PDS5Q04264 1277 aa7.36□□□□□ -1.23
CSC1YLR241W MED8P38304 223 aa7.36□□□□□ -1.23
CSC1YLR241W NMD2P38798 1089 aaKnown RBP7.36□□□□□ -1.23
CSC1YLR241W PDR5P33302 1511 aaKnown RBP7.35□□□□□ -1.23
CSC1YLR241W RAD2P07276 1031 aa7.35□□□□□ -1.23
CSC1YLR241W ECM1P39715 212 aa7.35□□□□□ -1.23
CSC1YLR241W BMS1Q08965 1183 aaKnown RBP7.35□□□□□ -1.23
CSC1YLR241W TRM3Q07527 1436 aa7.35□□□□□ -1.23
CSC1YLR241W RIX1P38883 763 aaPredicted RBP7.35□□□□□ -1.23
CSC1YLR241W CDC45Q08032 650 aa7.35□□□□□ -1.23
CSC1YLR241W YNL011CP53980 444 aa7.34□□□□□ -1.23
CSC1YLR241W TEA1P47988 759 aa7.34□□□□□ -1.23
CSC1YLR241W ETT1Q08421 412 aaKnown RBP7.34□□□□□ -1.23
CSC1YLR241W ULS1Q08562 1619 aa7.34□□□□□ -1.24
CSC1YLR241W VPS27P40343 622 aaKnown RBP7.33□□□□□ -1.24
CSC1YLR241W GRX3Q03835 250 aa7.33□□□□□ -1.24
CSC1YLR241W TPM2P40414 161 aa7.32□□□□□ -1.24
CSC1YLR241W PAP2P53632 584 aaKnown RBP7.32□□□□□ -1.24
CSC1YLR241W ECM16Q04217 1267 aaKnown RBP7.32□□□□□ -1.24
CSC1YLR241W GEA2P39993 1459 aaKnown RBP7.31□□□□□ -1.24
CSC1YLR241W ESC1Q03661 1658 aaKnown RBP7.31□□□□□ -1.24
CSC1YLR241W MCM2P29469 868 aa7.31□□□□□ -1.24
CSC1YLR241W RSC1P53236 928 aa7.31□□□□□ -1.24
CSC1YLR241W UTP13Q05946 817 aaKnown RBP7.31□□□□□ -1.24
CSC1YLR241W NUP157P40064 1391 aaKnown RBP7.31□□□□□ -1.24
CSC1YLR241W RIM101P33400 625 aa7.3□□□□□ -1.24
CSC1YLR241W NOP7P53261 605 aaKnown RBP7.3□□□□□ -1.24
CSC1YLR241W PRP3Q03338 469 aaPredicted RBP7.3□□□□□ -1.24
CSC1YLR241W SUI2P20459 304 aaKnown RBP7.3□□□□□ -1.24
CSC1YLR241W MDG1P53885 366 aa7.3□□□□□ -1.24
CSC1YLR241W CLB1P24868 471 aa7.29□□□□□ -1.24
CSC1YLR241W VPS4P52917 437 aa7.29□□□□□ -1.24
CSC1YLR241W RPN7Q06103 429 aaKnown RBP7.29□□□□□ -1.24
CSC1YLR241W YDL144CQ07589 356 aa7.29□□□□□ -1.24
CSC1YLR241W MSH4P40965 878 aaPredicted RBP7.28□□□□□ -1.24
CSC1YLR241W RLP24Q07915 199 aaKnown RBP7.28□□□□□ -1.24
CSC1YLR241W YGL081WP53156 320 aa7.28□□□□□ -1.24
CSC1YLR241W RPN1P38764 993 aaKnown RBP7.27□□□□□ -1.25
CSC1YLR241W DEP1P31385 405 aa7.26□□□□□ -1.25
CSC1YLR241W LCD1Q04377 747 aa7.26□□□□□ -1.25
CSC1YLR241W LTV1P34078 463 aa7.25□□□□□ -1.25
CSC1YLR241W HOS3Q02959 697 aaKnown RBP7.25□□□□□ -1.25
CSC1YLR241W NOP14Q99207 810 aaKnown RBP7.25□□□□□ -1.25
CSC1YLR241W CIN4P39110 191 aa7.24□□□□□ -1.25
CSC1YLR241W ITC1P53125 1264 aa7.23□□□□□ -1.25
CSC1YLR241W PIL1P53252 339 aaKnown RBP7.23□□□□□ -1.25
CSC1YLR241W VPS60Q03390 229 aa7.23□□□□□ -1.25
CSC1YLR241W RKM3P38222 552 aa7.23□□□□□ -1.25
CSC1YLR241W NNF2P53253 936 aa7.23□□□□□ -1.25
CSC1YLR241W LSP1Q12230 341 aaKnown RBP7.23□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 65.9 ms