RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeastyeast

Gene SMD3, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD3YLR147C SOL3P38858 249 aa8.94□□□□□ -0.98
SMD3YLR147C IFH1P39520 1085 aa8.94□□□□□ -0.98
SMD3YLR147C SIS1P25294 352 aaKnown RBP8.92□□□□□ -0.98
SMD3YLR147C NST1P53935 1240 aa8.91□□□□□ -0.98
SMD3YLR147C LDB19Q12502 818 aa8.91□□□□□ -0.98
SMD3YLR147C VPS70P47161 811 aa8.89□□□□□ -0.99
SMD3YLR147C YEL023CP39992 682 aa8.87□□□□□ -0.99
SMD3YLR147C YGR273CP53329 174 aa8.86□□□□□ -0.99
SMD3YLR147C YNL035CP53962 389 aaKnown RBP8.86□□□□□ -0.99
SMD3YLR147C PTC4P38089 393 aa8.85□□□□□ -0.99
SMD3YLR147C DAN4P47179 1161 aa8.85□□□□□ -0.99
SMD3YLR147C JIP4Q03361 876 aa8.85□□□□□ -0.99
SMD3YLR147C RTG1P32607 177 aa8.84□□□□□ -0.99
SMD3YLR147C FKH1P40466 484 aa8.84□□□□□ -0.99
SMD3YLR147C AIR2Q12476 344 aaKnown RBP8.81□□□□□ -1
SMD3YLR147C MPH3P0CE00 602 aa8.8□□□□□ -1
SMD3YLR147C SEC61P32915 480 aa8.79□□□□□ -1
SMD3YLR147C UBP14P38237 781 aaKnown RBP8.79□□□□□ -1
SMD3YLR147C ILV3P39522 585 aaKnown RBP8.79□□□□□ -1
SMD3YLR147C AI4P03878 556 aa8.78□□□□□ -1
SMD3YLR147C REF2P42073 533 aaPredicted RBP8.77□□□□□ -1.01
SMD3YLR147C CKB1P43639 278 aa8.77□□□□□ -1.01
SMD3YLR147C YLR326WQ06170 240 aaKnown RBP8.77□□□□□ -1.01
SMD3YLR147C VHR2P40041 505 aa8.76□□□□□ -1.01
SMD3YLR147C NCR1Q12200 1170 aa8.76□□□□□ -1.01
SMD3YLR147C KEX1P09620 729 aa8.74□□□□□ -1.01
SMD3YLR147C YDR090CQ03193 310 aa8.71□□□□□ -1.02
SMD3YLR147C PML39Q03760 334 aa8.68□□□□□ -1.02
SMD3YLR147C PBS2P08018 668 aa8.67□□□□□ -1.02
SMD3YLR147C PCS60P38137 543 aaKnown RBP RIP-Chip data8.67□□□□□ -1.02 RIP-Chip
SMD3YLR147C TFG1P41895 735 aaPredicted RBP8.67□□□□□ -1.02
SMD3YLR147C SLI15P38283 698 aa8.66□□□□□ -1.02
SMD3YLR147C YDL129WQ07555 291 aa8.66□□□□□ -1.02
SMD3YLR147C COX6P00427 148 aa8.65□□□□□ -1.02
SMD3YLR147C RAD54P32863 898 aa8.65□□□□□ -1.02
SMD3YLR147C MID1P41821 548 aa8.65□□□□□ -1.02
SMD3YLR147C MAK21Q12176 1025 aaKnown RBP8.64□□□□□ -1.03
SMD3YLR147C DSF2P38213 736 aa8.63□□□□□ -1.03
SMD3YLR147C SPB4P25808 606 aaPredicted RBP8.62□□□□□ -1.03
SMD3YLR147C YJL171CP46992 396 aa8.62□□□□□ -1.03
SMD3YLR147C SAP30P38429 201 aa8.61□□□□□ -1.03
SMD3YLR147C BMT6Q12291 365 aa8.61□□□□□ -1.03
SMD3YLR147C KIC1P38692 1080 aa8.58□□□□□ -1.04
SMD3YLR147C YDR344CQ05510 147 aa8.56□□□□□ -1.04
SMD3YLR147C MPC54Q08550 464 aa8.56□□□□□ -1.04
SMD3YLR147C CDC73Q06697 393 aa8.54□□□□□ -1.04
SMD3YLR147C MAM3Q12296 706 aa8.54□□□□□ -1.04
SMD3YLR147C PEX29Q03370 554 aa8.53□□□□□ -1.04
SMD3YLR147C IES2P40154 320 aa8.51□□□□□ -1.05
SMD3YLR147C DPL1Q05567 589 aa8.51□□□□□ -1.05
SMD3YLR147C ORC6P38826 435 aa8.5□□□□□ -1.05
SMD3YLR147C NUP42P49686 430 aaKnown RBP8.5□□□□□ -1.05
SMD3YLR147C GAP1P19145 602 aaPredicted RBP8.49□□□□□ -1.05
SMD3YLR147C ARH1P48360 493 aa8.49□□□□□ -1.05
SMD3YLR147C LEU3P08638 886 aa8.47□□□□□ -1.05
SMD3YLR147C NMA111P53920 997 aa8.47□□□□□ -1.05
SMD3YLR147C DIT2P21595 489 aa8.46□□□□□ -1.06
SMD3YLR147C PRE3P38624 215 aa8.45□□□□□ -1.06
SMD3YLR147C HAP5Q02516 242 aa8.44□□□□□ -1.06
SMD3YLR147C ELP4Q02884 456 aaKnown RBP8.44□□□□□ -1.06
SMD3YLR147C ISU2Q12056 156 aa8.44□□□□□ -1.06
SMD3YLR147C RPP1BP10622 106 aaKnown RBP8.43□□□□□ -1.06
SMD3YLR147C CSC1Q06538 782 aa8.43□□□□□ -1.06
SMD3YLR147C CHL1P22516 861 aaPredicted RBP8.42□□□□□ -1.06
SMD3YLR147C MVP1P40959 511 aaKnown RBP8.41□□□□□ -1.06
SMD3YLR147C RGR1P19263 1082 aa8.4□□□□□ -1.06
SMD3YLR147C PSE1P32337 1089 aaKnown RBP8.4□□□□□ -1.06
SMD3YLR147C TFB4Q12004 338 aa8.39□□□□□ -1.07
SMD3YLR147C SPT23P35210 1082 aa8.37□□□□□ -1.07
SMD3YLR147C YNR021WP53723 404 aaKnown RBP8.37□□□□□ -1.07
SMD3YLR147C BNI4P53858 892 aa8.37□□□□□ -1.07
SMD3YLR147C PEX21P50091 288 aa8.35□□□□□ -1.07
SMD3YLR147C YPR109WQ06104 294 aa8.34□□□□□ -1.07
SMD3YLR147C YRR1Q12172 810 aa8.34□□□□□ -1.07
SMD3YLR147C TUM1Q08686 304 aaKnown RBP8.33□□□□□ -1.08
SMD3YLR147C PDR1P12383 1068 aa8.32□□□□□ -1.08
SMD3YLR147C RAM1P22007 431 aa8.32□□□□□ -1.08
SMD3YLR147C GLC3P32775 704 aa8.3□□□□□ -1.08
SMD3YLR147C PTC2P39966 464 aaKnown RBP8.3□□□□□ -1.08
SMD3YLR147C YML082WQ04533 649 aaKnown RBP8.3□□□□□ -1.08
SMD3YLR147C RPN1P38764 993 aaKnown RBP8.28□□□□□ -1.08
SMD3YLR147C YPR015CQ12531 247 aa8.28□□□□□ -1.08
SMD3YLR147C CLB5P30283 435 aa8.25□□□□□ -1.09
SMD3YLR147C ATF2P53296 535 aa8.25□□□□□ -1.09
SMD3YLR147C TEA1P47988 759 aa8.24□□□□□ -1.09
SMD3YLR147C AIM7Q12156 149 aa8.24□□□□□ -1.09
SMD3YLR147C NUD1P32336 851 aa8.23□□□□□ -1.09
SMD3YLR147C BCK2P33306 851 aa8.22□□□□□ -1.09
SMD3YLR147C VRP1P37370 817 aa8.22□□□□□ -1.09
SMD3YLR147C ISM1P48526 1002 aa8.22□□□□□ -1.09
SMD3YLR147C STR2P47164 639 aa8.21□□□□□ -1.1
SMD3YLR147C BUD20Q08004 166 aaPredicted RBP8.19□□□□□ -1.1
SMD3YLR147C KIN1P13185 1064 aa8.18□□□□□ -1.1
SMD3YLR147C NIS1P53939 407 aa8.18□□□□□ -1.1
SMD3YLR147C SIT4P20604 311 aa8.17□□□□□ -1.1
SMD3YLR147C LEO1P38439 464 aa8.17□□□□□ -1.1
SMD3YLR147C ERF2Q06551 359 aa8.15□□□□□ -1.1
SMD3YLR147C FPK1P53739 893 aa8.14□□□□□ -1.11
SMD3YLR147C TY1A-DR4O74302 440 aa8.13□□□□□ -1.11
SMD3YLR147C TY1A-HP0C2I4 478 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 26.9 ms