RNA–Protein interactions for RNA: YLR040C

AFB1, Transcript of MATalpha-specific a-factor blocker, yeastyeast

Gene AFB1, Length 675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFB1YLR040C LDB19Q12502 818 aa6.62□□□□□ -1.35
AFB1YLR040C NST1P53935 1240 aa6.59□□□□□ -1.35
AFB1YLR040C YPR148CQ06523 435 aa6.59□□□□□ -1.35
AFB1YLR040C SAS10Q12136 610 aaPredicted RBP6.59□□□□□ -1.35
AFB1YLR040C VPS70P47161 811 aa6.58□□□□□ -1.36
AFB1YLR040C IFH1P39520 1085 aa6.57□□□□□ -1.36
AFB1YLR040C YEL023CP39992 682 aa6.57□□□□□ -1.36
AFB1YLR040C DAN4P47179 1161 aa6.57□□□□□ -1.36
AFB1YLR040C RTG1P32607 177 aa6.56□□□□□ -1.36
AFB1YLR040C PTC4P38089 393 aa6.56□□□□□ -1.36
AFB1YLR040C YGR273CP53329 174 aa6.56□□□□□ -1.36
AFB1YLR040C YNL035CP53962 389 aaKnown RBP6.56□□□□□ -1.36
AFB1YLR040C FKH1P40466 484 aa6.55□□□□□ -1.36
AFB1YLR040C JIP4Q03361 876 aa6.54□□□□□ -1.36
AFB1YLR040C AIR2Q12476 344 aaKnown RBP6.54□□□□□ -1.36
AFB1YLR040C SEC61P32915 480 aa6.51□□□□□ -1.37
AFB1YLR040C UBP14P38237 781 aaKnown RBP6.51□□□□□ -1.37
AFB1YLR040C ILV3P39522 585 aaKnown RBP6.51□□□□□ -1.37
AFB1YLR040C NCR1Q12200 1170 aa6.51□□□□□ -1.37
AFB1YLR040C MPH3P0CE00 602 aa6.5□□□□□ -1.37
AFB1YLR040C AI4P03878 556 aa6.48□□□□□ -1.37
AFB1YLR040C VHR2P40041 505 aa6.48□□□□□ -1.37
AFB1YLR040C YLR326WQ06170 240 aaKnown RBP6.48□□□□□ -1.37
AFB1YLR040C KEX1P09620 729 aa6.47□□□□□ -1.37
AFB1YLR040C REF2P42073 533 aaPredicted RBP6.47□□□□□ -1.37
AFB1YLR040C CKB1P43639 278 aa6.46□□□□□ -1.38
AFB1YLR040C YDR090CQ03193 310 aa6.45□□□□□ -1.38
AFB1YLR040C PML39Q03760 334 aa6.45□□□□□ -1.38
AFB1YLR040C MID1P41821 548 aa6.44□□□□□ -1.38
AFB1YLR040C TFG1P41895 735 aaPredicted RBP6.43□□□□□ -1.38
AFB1YLR040C PCS60P38137 543 aaKnown RBP RIP-Chip data6.42□□□□□ -1.38 RIP-Chip
AFB1YLR040C YJL171CP46992 396 aa6.42□□□□□ -1.38
AFB1YLR040C YDL129WQ07555 291 aa6.42□□□□□ -1.38
AFB1YLR040C SLI15P38283 698 aa6.41□□□□□ -1.38
AFB1YLR040C PBS2P08018 668 aa6.4□□□□□ -1.38
AFB1YLR040C SAP30P38429 201 aa6.4□□□□□ -1.38
AFB1YLR040C RAD54P32863 898 aa6.39□□□□□ -1.39
AFB1YLR040C BMT6Q12291 365 aa6.39□□□□□ -1.39
AFB1YLR040C COX6P00427 148 aa6.38□□□□□ -1.39
AFB1YLR040C SPB4P25808 606 aaPredicted RBP6.38□□□□□ -1.39
AFB1YLR040C YDR344CQ05510 147 aa6.38□□□□□ -1.39
AFB1YLR040C DSF2P38213 736 aa6.35□□□□□ -1.39
AFB1YLR040C MAK21Q12176 1025 aaKnown RBP6.35□□□□□ -1.39
AFB1YLR040C CDC73Q06697 393 aa6.34□□□□□ -1.39
AFB1YLR040C KIC1P38692 1080 aa6.33□□□□□ -1.4
AFB1YLR040C PEX29Q03370 554 aa6.33□□□□□ -1.4
AFB1YLR040C MPC54Q08550 464 aa6.33□□□□□ -1.4
AFB1YLR040C MAM3Q12296 706 aa6.3□□□□□ -1.4
AFB1YLR040C NMA111P53920 997 aa6.29□□□□□ -1.4
AFB1YLR040C DPL1Q05567 589 aa6.29□□□□□ -1.4
AFB1YLR040C ARH1P48360 493 aa6.28□□□□□ -1.4
AFB1YLR040C ORC6P38826 435 aa6.27□□□□□ -1.41
AFB1YLR040C IES2P40154 320 aa6.27□□□□□ -1.41
AFB1YLR040C NUP42P49686 430 aaKnown RBP6.27□□□□□ -1.41
AFB1YLR040C GAP1P19145 602 aaPredicted RBP6.26□□□□□ -1.41
AFB1YLR040C DIT2P21595 489 aa6.26□□□□□ -1.41
AFB1YLR040C PRE3P38624 215 aa6.26□□□□□ -1.41
AFB1YLR040C ELP4Q02884 456 aaKnown RBP6.26□□□□□ -1.41
AFB1YLR040C CHL1P22516 861 aaPredicted RBP6.24□□□□□ -1.41
AFB1YLR040C HAP5Q02516 242 aa6.24□□□□□ -1.41
AFB1YLR040C ISU2Q12056 156 aa6.24□□□□□ -1.41
AFB1YLR040C RPP1BP10622 106 aaKnown RBP6.21□□□□□ -1.42
AFB1YLR040C RGR1P19263 1082 aa6.21□□□□□ -1.42
AFB1YLR040C MVP1P40959 511 aaKnown RBP6.21□□□□□ -1.42
AFB1YLR040C CSC1Q06538 782 aa6.21□□□□□ -1.42
AFB1YLR040C LEU3P08638 886 aa6.2□□□□□ -1.42
AFB1YLR040C PDR1P12383 1068 aa6.19□□□□□ -1.42
AFB1YLR040C SPT23P35210 1082 aa6.19□□□□□ -1.42
AFB1YLR040C PSE1P32337 1089 aaKnown RBP6.18□□□□□ -1.42
AFB1YLR040C BNI4P53858 892 aa6.18□□□□□ -1.42
AFB1YLR040C TUM1Q08686 304 aaKnown RBP6.18□□□□□ -1.42
AFB1YLR040C YRR1Q12172 810 aa6.18□□□□□ -1.42
AFB1YLR040C PEX21P50091 288 aa6.17□□□□□ -1.42
AFB1YLR040C YPR109WQ06104 294 aa6.17□□□□□ -1.42
AFB1YLR040C TFB4Q12004 338 aa6.17□□□□□ -1.42
AFB1YLR040C RAM1P22007 431 aa6.15□□□□□ -1.42
AFB1YLR040C YNR021WP53723 404 aaKnown RBP6.15□□□□□ -1.42
AFB1YLR040C GLC3P32775 704 aa6.14□□□□□ -1.43
AFB1YLR040C PTC2P39966 464 aaKnown RBP6.14□□□□□ -1.43
AFB1YLR040C YPR015CQ12531 247 aa6.14□□□□□ -1.43
AFB1YLR040C YML082WQ04533 649 aaKnown RBP6.13□□□□□ -1.43
AFB1YLR040C VRP1P37370 817 aa6.11□□□□□ -1.43
AFB1YLR040C ATF2P53296 535 aa6.1□□□□□ -1.43
AFB1YLR040C BCK2P33306 851 aa6.09□□□□□ -1.43
AFB1YLR040C TEA1P47988 759 aa6.09□□□□□ -1.43
AFB1YLR040C NUD1P32336 851 aa6.08□□□□□ -1.44
AFB1YLR040C STR2P47164 639 aa6.08□□□□□ -1.44
AFB1YLR040C ISM1P48526 1002 aa6.08□□□□□ -1.44
AFB1YLR040C RPN1P38764 993 aaKnown RBP6.07□□□□□ -1.44
AFB1YLR040C BUD20Q08004 166 aaPredicted RBP6.07□□□□□ -1.44
AFB1YLR040C CLB5P30283 435 aa6.06□□□□□ -1.44
AFB1YLR040C NIS1P53939 407 aa6.05□□□□□ -1.44
AFB1YLR040C ERF2Q06551 359 aa6.05□□□□□ -1.44
AFB1YLR040C AIM7Q12156 149 aa6.05□□□□□ -1.44
AFB1YLR040C KEX2P13134 814 aa6.02□□□□□ -1.45
AFB1YLR040C KIN1P13185 1064 aa6.02□□□□□ -1.45
AFB1YLR040C SEC2P17065 759 aa6.02□□□□□ -1.45
AFB1YLR040C SIT4P20604 311 aa6.02□□□□□ -1.45
AFB1YLR040C GCD11P32481 527 aaKnown RBP6.02□□□□□ -1.45
AFB1YLR040C NPL4P33755 580 aa6.02□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms