RNA–Protein interactions for RNA: YKL007W

CAP1, Transcript of Alpha subunit of the capping protein heterodimer (Cap1p and Cap2p), yeastyeast

Gene CAP1, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAP1YKL007W JIP4Q03361 876 aa7.64□□□□□ -1.19
CAP1YKL007W LDB19Q12502 818 aa7.63□□□□□ -1.19
CAP1YKL007W YPR148CQ06523 435 aa7.62□□□□□ -1.19
CAP1YKL007W YNL035CP53962 389 aaKnown RBP7.61□□□□□ -1.19
CAP1YKL007W PTC4P38089 393 aa7.6□□□□□ -1.19
CAP1YKL007W YEL023CP39992 682 aa7.6□□□□□ -1.19
CAP1YKL007W SAS10Q12136 610 aaPredicted RBP7.6□□□□□ -1.19
CAP1YKL007W AIR2Q12476 344 aaKnown RBP7.6□□□□□ -1.19
CAP1YKL007W YJL171CP46992 396 aa7.59□□□□□ -1.19
CAP1YKL007W SEC61P32915 480 aa7.58□□□□□ -1.2
CAP1YKL007W RTG1P32607 177 aa7.57□□□□□ -1.2
CAP1YKL007W TFG1P41895 735 aaPredicted RBP7.56□□□□□ -1.2
CAP1YKL007W CKB1P43639 278 aa7.56□□□□□ -1.2
CAP1YKL007W VPS70P47161 811 aa7.56□□□□□ -1.2
CAP1YKL007W FKH1P40466 484 aa7.55□□□□□ -1.2
CAP1YKL007W YGR273CP53329 174 aa7.55□□□□□ -1.2
CAP1YKL007W DAN4P47179 1161 aa7.54□□□□□ -1.2
CAP1YKL007W NCR1Q12200 1170 aa7.54□□□□□ -1.2
CAP1YKL007W SOL3P38858 249 aa7.53□□□□□ -1.2
CAP1YKL007W AI4P03878 556 aa7.52□□□□□ -1.21
CAP1YKL007W MPH3P0CE00 602 aa7.51□□□□□ -1.21
CAP1YKL007W NST1P53935 1240 aa7.51□□□□□ -1.21
CAP1YKL007W REF2P42073 533 aaPredicted RBP7.5□□□□□ -1.21
CAP1YKL007W YDL129WQ07555 291 aa7.45□□□□□ -1.22
CAP1YKL007W MAK21Q12176 1025 aaKnown RBP7.45□□□□□ -1.22
CAP1YKL007W KEX1P09620 729 aa7.44□□□□□ -1.22
CAP1YKL007W UBP14P38237 781 aaKnown RBP7.44□□□□□ -1.22
CAP1YKL007W VHR2P40041 505 aa7.44□□□□□ -1.22
CAP1YKL007W BMT6Q12291 365 aa7.44□□□□□ -1.22
CAP1YKL007W YLR326WQ06170 240 aaKnown RBP7.43□□□□□ -1.22
CAP1YKL007W KIC1P38692 1080 aa7.42□□□□□ -1.22
CAP1YKL007W PML39Q03760 334 aa7.42□□□□□ -1.22
CAP1YKL007W RAD54P32863 898 aa7.41□□□□□ -1.22
CAP1YKL007W PBS2P08018 668 aa7.4□□□□□ -1.22
CAP1YKL007W COX6P00427 148 aa7.39□□□□□ -1.23
CAP1YKL007W SPB4P25808 606 aaPredicted RBP7.39□□□□□ -1.23
CAP1YKL007W ILV3P39522 585 aaKnown RBP7.39□□□□□ -1.23
CAP1YKL007W SAP30P38429 201 aa7.38□□□□□ -1.23
CAP1YKL007W RPP1BP10622 106 aaKnown RBP7.37□□□□□ -1.23
CAP1YKL007W YDR090CQ03193 310 aa7.37□□□□□ -1.23
CAP1YKL007W PCS60P38137 543 aaKnown RBP RIP-Chip data7.36□□□□□ -1.23not detected
CAP1YKL007W SLI15P38283 698 aa7.36□□□□□ -1.23
CAP1YKL007W PEX29Q03370 554 aa7.36□□□□□ -1.23
CAP1YKL007W DSF2P38213 736 aa7.34□□□□□ -1.23
CAP1YKL007W MID1P41821 548 aa7.34□□□□□ -1.23
CAP1YKL007W MAM3Q12296 706 aa7.32□□□□□ -1.24
CAP1YKL007W DPL1Q05567 589 aa7.3□□□□□ -1.24
CAP1YKL007W ARH1P48360 493 aa7.29□□□□□ -1.24
CAP1YKL007W MPC54Q08550 464 aa7.28□□□□□ -1.24
CAP1YKL007W CHL1P22516 861 aaPredicted RBP7.27□□□□□ -1.25
CAP1YKL007W ELP4Q02884 456 aaKnown RBP7.27□□□□□ -1.25
CAP1YKL007W PRE3P38624 215 aa7.26□□□□□ -1.25
CAP1YKL007W NMA111P53920 997 aa7.25□□□□□ -1.25
CAP1YKL007W HAP5Q02516 242 aa7.25□□□□□ -1.25
CAP1YKL007W ISU2Q12056 156 aa7.25□□□□□ -1.25
CAP1YKL007W CSC1Q06538 782 aa7.24□□□□□ -1.25
CAP1YKL007W CDC73Q06697 393 aa7.24□□□□□ -1.25
CAP1YKL007W IES2P40154 320 aa7.23□□□□□ -1.25
CAP1YKL007W LEU3P08638 886 aa7.22□□□□□ -1.25
CAP1YKL007W SPT23P35210 1082 aa7.22□□□□□ -1.25
CAP1YKL007W ORC6P38826 435 aa7.22□□□□□ -1.25
CAP1YKL007W PEX21P50091 288 aa7.22□□□□□ -1.25
CAP1YKL007W TFB4Q12004 338 aa7.21□□□□□ -1.26
CAP1YKL007W PSE1P32337 1089 aaKnown RBP7.2□□□□□ -1.26
CAP1YKL007W GAP1P19145 602 aaPredicted RBP7.19□□□□□ -1.26
CAP1YKL007W NUP42P49686 430 aaKnown RBP7.19□□□□□ -1.26
CAP1YKL007W BNI4P53858 892 aa7.19□□□□□ -1.26
CAP1YKL007W PTC2P39966 464 aaKnown RBP7.15□□□□□ -1.26
CAP1YKL007W MVP1P40959 511 aaKnown RBP7.15□□□□□ -1.26
CAP1YKL007W YNR021WP53723 404 aaKnown RBP7.15□□□□□ -1.26
CAP1YKL007W YDR344CQ05510 147 aa7.15□□□□□ -1.26
CAP1YKL007W RGR1P19263 1082 aa7.14□□□□□ -1.27
CAP1YKL007W DIT2P21595 489 aa7.14□□□□□ -1.27
CAP1YKL007W CLB5P30283 435 aa7.14□□□□□ -1.27
CAP1YKL007W YML082WQ04533 649 aaKnown RBP7.13□□□□□ -1.27
CAP1YKL007W TUM1Q08686 304 aaKnown RBP7.11□□□□□ -1.27
CAP1YKL007W YRR1Q12172 810 aa7.11□□□□□ -1.27
CAP1YKL007W BCK2P33306 851 aa7.1□□□□□ -1.27
CAP1YKL007W ATF2P53296 535 aa7.1□□□□□ -1.27
CAP1YKL007W YPR109WQ06104 294 aa7.1□□□□□ -1.27
CAP1YKL007W RPN1P38764 993 aaKnown RBP7.09□□□□□ -1.27
CAP1YKL007W VRP1P37370 817 aa7.07□□□□□ -1.28
CAP1YKL007W TEA1P47988 759 aa7.07□□□□□ -1.28
CAP1YKL007W AIM7Q12156 149 aa7.07□□□□□ -1.28
CAP1YKL007W NPL4P33755 580 aa7.06□□□□□ -1.28
CAP1YKL007W PDR1P12383 1068 aa7.05□□□□□ -1.28
CAP1YKL007W RAM1P22007 431 aa7.04□□□□□ -1.28
CAP1YKL007W GLC3P32775 704 aa7.04□□□□□ -1.28
CAP1YKL007W NUD1P32336 851 aa7.03□□□□□ -1.28
CAP1YKL007W XDJ1P39102 459 aa7□□□□□ -1.29
CAP1YKL007W SAS4Q04003 481 aa6.99□□□□□ -1.29
CAP1YKL007W YPR015CQ12531 247 aa6.99□□□□□ -1.29
CAP1YKL007W LEO1P38439 464 aa6.98□□□□□ -1.29
CAP1YKL007W GYP1Q08484 637 aa6.98□□□□□ -1.29
CAP1YKL007W STR2P47164 639 aa6.97□□□□□ -1.29
CAP1YKL007W ISM1P48526 1002 aa6.97□□□□□ -1.29
CAP1YKL007W PRT1P06103 763 aaKnown RBP6.96□□□□□ -1.3
CAP1YKL007W RTF1P53064 558 aa6.96□□□□□ -1.3
CAP1YKL007W YMR196WQ04336 1088 aa6.96□□□□□ -1.3
CAP1YKL007W BUD20Q08004 166 aaPredicted RBP6.96□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 78.8 ms