RNA–Protein interactions for RNA: YJL038C

LOH1, Transcript of Protein involved in outer spore wall assembly, yeastyeast

Gene LOH1, Length 660 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOH1YJL038C ATH1P48016 1211 aa8.03□□□□□ -1.12
LOH1YJL038C SEC61P32915 480 aa8□□□□□ -1.13
LOH1YJL038C YEL023CP39992 682 aa8□□□□□ -1.13
LOH1YJL038C TFG1P41895 735 aaPredicted RBP8□□□□□ -1.13
LOH1YJL038C BMT6Q12291 365 aa8□□□□□ -1.13
LOH1YJL038C JIP4Q03361 876 aa7.99□□□□□ -1.13
LOH1YJL038C GUT1P32190 709 aa7.98□□□□□ -1.13
LOH1YJL038C PTC4P38089 393 aa7.97□□□□□ -1.13
LOH1YJL038C DAN4P47179 1161 aa7.95□□□□□ -1.14
LOH1YJL038C SET1P38827 1080 aaKnown RBP7.91□□□□□ -1.14
LOH1YJL038C NOP53Q12080 455 aaKnown RBP7.9□□□□□ -1.14
LOH1YJL038C SAP30P38429 201 aa7.89□□□□□ -1.15
LOH1YJL038C YDL129WQ07555 291 aa7.87□□□□□ -1.15
LOH1YJL038C SOL3P38858 249 aa7.85□□□□□ -1.15
LOH1YJL038C PML39Q03760 334 aa7.84□□□□□ -1.15
LOH1YJL038C NST1P53935 1240 aa7.81□□□□□ -1.16
LOH1YJL038C YGR273CP53329 174 aa7.8□□□□□ -1.16
LOH1YJL038C MPH3P0CE00 602 aa7.79□□□□□ -1.16
LOH1YJL038C AI4P03878 556 aa7.77□□□□□ -1.17
LOH1YJL038C MID1P41821 548 aa7.76□□□□□ -1.17
LOH1YJL038C ILV3P39522 585 aaKnown RBP7.73□□□□□ -1.17
LOH1YJL038C CHL1P22516 861 aaPredicted RBP7.72□□□□□ -1.17
LOH1YJL038C PEX29Q03370 554 aa7.72□□□□□ -1.17
LOH1YJL038C PRE3P38624 215 aa7.71□□□□□ -1.18
LOH1YJL038C ELP4Q02884 456 aaKnown RBP7.71□□□□□ -1.18
LOH1YJL038C IFH1P39520 1085 aa7.7□□□□□ -1.18
LOH1YJL038C YDR344CQ05510 147 aa7.69□□□□□ -1.18
LOH1YJL038C DMA1P38823 416 aa7.68□□□□□ -1.18
LOH1YJL038C VHR2P40041 505 aa7.68□□□□□ -1.18
LOH1YJL038C SGS1P35187 1447 aa7.68□□□□□ -1.18
LOH1YJL038C KEX1P09620 729 aa7.67□□□□□ -1.18
LOH1YJL038C SLI15P38283 698 aa7.66□□□□□ -1.18
LOH1YJL038C UBP14P38237 781 aaKnown RBP7.64□□□□□ -1.19
LOH1YJL038C ARH1P48360 493 aa7.64□□□□□ -1.19
LOH1YJL038C VPS70P47161 811 aa7.63□□□□□ -1.19
LOH1YJL038C YLR326WQ06170 240 aaKnown RBP7.63□□□□□ -1.19
LOH1YJL038C MPC54Q08550 464 aa7.62□□□□□ -1.19
LOH1YJL038C BCK2P33306 851 aa7.61□□□□□ -1.19
LOH1YJL038C YPR148CQ06523 435 aa7.61□□□□□ -1.19
LOH1YJL038C HAP5Q02516 242 aa7.6□□□□□ -1.19
LOH1YJL038C RAD54P32863 898 aa7.59□□□□□ -1.19
LOH1YJL038C PCS60P38137 543 aaKnown RBP RIP-Chip data7.58□□□□□ -1.2not detected
LOH1YJL038C REF2P42073 533 aaPredicted RBP7.58□□□□□ -1.2
LOH1YJL038C NMA111P53920 997 aa7.58□□□□□ -1.2
LOH1YJL038C DPL1Q05567 589 aa7.58□□□□□ -1.2
LOH1YJL038C SPT23P35210 1082 aa7.56□□□□□ -1.2
LOH1YJL038C VRP1P37370 817 aa7.56□□□□□ -1.2
LOH1YJL038C KIC1P38692 1080 aa7.56□□□□□ -1.2
LOH1YJL038C CDC73Q06697 393 aa7.54□□□□□ -1.2
LOH1YJL038C YDR090CQ03193 310 aa7.53□□□□□ -1.2
LOH1YJL038C RPP1BP10622 106 aaKnown RBP7.51□□□□□ -1.21
LOH1YJL038C BNI4P53858 892 aa7.51□□□□□ -1.21
LOH1YJL038C PTC2P39966 464 aaKnown RBP7.5□□□□□ -1.21
LOH1YJL038C ISU2Q12056 156 aa7.5□□□□□ -1.21
LOH1YJL038C CKB1P43639 278 aa7.46□□□□□ -1.22
LOH1YJL038C INO80P53115 1489 aa7.46□□□□□ -1.22
LOH1YJL038C COX6P00427 148 aa7.45□□□□□ -1.22
LOH1YJL038C XDJ1P39102 459 aa7.44□□□□□ -1.22
LOH1YJL038C YML082WQ04533 649 aaKnown RBP7.44□□□□□ -1.22
LOH1YJL038C MAK21Q12176 1025 aaKnown RBP7.44□□□□□ -1.22
LOH1YJL038C PEX21P50091 288 aa7.43□□□□□ -1.22
LOH1YJL038C PBS2P08018 668 aa7.42□□□□□ -1.22
LOH1YJL038C SAS10Q12136 610 aaPredicted RBP7.41□□□□□ -1.22
LOH1YJL038C PDR1P12383 1068 aa7.4□□□□□ -1.22
LOH1YJL038C TCB3Q03640 1545 aaKnown RBP7.39□□□□□ -1.23
LOH1YJL038C RQC2Q12532 1038 aaKnown RBP7.38□□□□□ -1.23
LOH1YJL038C CSC1Q06538 782 aa7.37□□□□□ -1.23
LOH1YJL038C YRR1Q12172 810 aa7.37□□□□□ -1.23
LOH1YJL038C ORC6P38826 435 aa7.36□□□□□ -1.23
LOH1YJL038C TUM1Q08686 304 aaKnown RBP7.36□□□□□ -1.23
LOH1YJL038C YPR015CQ12531 247 aa7.36□□□□□ -1.23
LOH1YJL038C RAM1P22007 431 aa7.35□□□□□ -1.23
LOH1YJL038C SPB4P25808 606 aaPredicted RBP7.35□□□□□ -1.23
LOH1YJL038C TFB4Q12004 338 aa7.35□□□□□ -1.23
LOH1YJL038C TY1B-DR4Q07793 1604 aa7.34□□□□□ -1.23
LOH1YJL038C GAP1P19145 602 aaPredicted RBP7.34□□□□□ -1.23
LOH1YJL038C GYP1Q08484 637 aa7.33□□□□□ -1.24
LOH1YJL038C MAM3Q12296 706 aa7.33□□□□□ -1.24
LOH1YJL038C SSN2P38931 1420 aa7.32□□□□□ -1.24
LOH1YJL038C MVP1P40959 511 aaKnown RBP7.31□□□□□ -1.24
LOH1YJL038C SPA2P23201 1466 aaKnown RBP7.3□□□□□ -1.24
LOH1YJL038C DPS1P04802 557 aaKnown RBP7.3□□□□□ -1.24
LOH1YJL038C MON2P48563 1636 aaPredicted RBP7.29□□□□□ -1.24
LOH1YJL038C RGR1P19263 1082 aa7.28□□□□□ -1.24
LOH1YJL038C DSF2P38213 736 aa7.28□□□□□ -1.24
LOH1YJL038C YPR109WQ06104 294 aa7.28□□□□□ -1.24
LOH1YJL038C NUD1P32336 851 aa7.27□□□□□ -1.25
LOH1YJL038C NPL4P33755 580 aa7.27□□□□□ -1.25
LOH1YJL038C IES2P40154 320 aa7.27□□□□□ -1.25
LOH1YJL038C BUD20Q08004 166 aaPredicted RBP7.25□□□□□ -1.25
LOH1YJL038C STR2P47164 639 aa7.24□□□□□ -1.25
LOH1YJL038C ISM1P48526 1002 aa7.24□□□□□ -1.25
LOH1YJL038C SAS4Q04003 481 aa7.23□□□□□ -1.25
LOH1YJL038C PRT1P06103 763 aaKnown RBP7.22□□□□□ -1.25
LOH1YJL038C PSE1P32337 1089 aaKnown RBP7.22□□□□□ -1.25
LOH1YJL038C GCD11P32481 527 aaKnown RBP7.22□□□□□ -1.25
LOH1YJL038C HSL1P34244 1518 aa7.19□□□□□ -1.26
LOH1YJL038C NUP42P49686 430 aaKnown RBP7.19□□□□□ -1.26
LOH1YJL038C DIT2P21595 489 aa7.18□□□□□ -1.26
LOH1YJL038C SWR1Q05471 1514 aa7.17□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 31.1 ms