RNA–Protein interactions for RNA: YJL038C

LOH1, Transcript of Protein involved in outer spore wall assembly, yeastyeast

Gene LOH1, Length 660 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOH1YJL038C MTC1P47018 478 aaKnown RBP13.52□□□□□ -0.25
LOH1YJL038C DRS1P32892 752 aaKnown RBP12.89□□□□□ -0.35
LOH1YJL038C FAP1P53971 965 aa12.04□□□□□ -0.48
LOH1YJL038C PRY3P47033 881 aa11.29□□□□□ -0.6
LOH1YJL038C PRI1P10363 409 aa11.28□□□□□ -0.6
LOH1YJL038C DIP2Q12220 943 aaPredicted RBP11.22□□□□□ -0.61
LOH1YJL038C AAD16Q02895 342 aa11.21□□□□□ -0.61
LOH1YJL038C ISW2Q08773 1120 aa11.2□□□□□ -0.62
LOH1YJL038C RPG1P38249 964 aaKnown RBP11.09□□□□□ -0.63
LOH1YJL038C BFR2Q06631 534 aaKnown RBP10.81□□□□□ -0.68
LOH1YJL038C AVT3P36062 692 aa10.8□□□□□ -0.68
LOH1YJL038C RSE1Q04693 1361 aaKnown RBP10.77□□□□□ -0.68
LOH1YJL038C TSR3Q12094 313 aaKnown RBP10.73□□□□□ -0.69
LOH1YJL038C HAA1Q12753 694 aaKnown RBP10.55□□□□□ -0.72
LOH1YJL038C YCK3P39962 524 aa10.54□□□□□ -0.72
LOH1YJL038C RPL17AP05740 184 aaKnown RBP10.44□□□□□ -0.74
LOH1YJL038C RPL17BP46990 184 aaKnown RBP10.44□□□□□ -0.74
LOH1YJL038C REB1P21538 810 aa10.4□□□□□ -0.74
LOH1YJL038C MRPL32P25348 183 aa10.31□□□□□ -0.76
LOH1YJL038C SPT21P35209 758 aa9.91□□□□□ -0.82
LOH1YJL038C YGL015CP33199 130 aa9.81□□□□□ -0.84
LOH1YJL038C YKR023WP36119 530 aaKnown RBP9.8□□□□□ -0.84
LOH1YJL038C CDC27P38042 758 aa9.78□□□□□ -0.84
LOH1YJL038C HOP09932 586 aa9.65□□□□□ -0.86
LOH1YJL038C RIM101P33400 625 aa9.63□□□□□ -0.87
LOH1YJL038C DCD1P06773 312 aa9.61□□□□□ -0.87
LOH1YJL038C TFC8Q12308 588 aa9.6□□□□□ -0.87
LOH1YJL038C TFA1P36100 482 aa9.59□□□□□ -0.87
LOH1YJL038C MAP2P38174 421 aaKnown RBP9.47□□□□□ -0.89
LOH1YJL038C UBP10P53874 792 aaPredicted RBP9.46□□□□□ -0.9
LOH1YJL038C SCY1P53009 804 aa9.34□□□□□ -0.91
LOH1YJL038C OXP1P28273 1286 aa9.33□□□□□ -0.92
LOH1YJL038C BCH2P36122 765 aa9.31□□□□□ -0.92
LOH1YJL038C YIL055CP40523 627 aaKnown RBP9.28□□□□□ -0.92
LOH1YJL038C PTP3P40048 928 aa9.26□□□□□ -0.93
LOH1YJL038C SLX5P32828 619 aaKnown RBP9.2□□□□□ -0.94
LOH1YJL038C YAH1Q12184 172 aaKnown RBP9.17□□□□□ -0.94
LOH1YJL038C TIF4632P39936 914 aaKnown RBP9.13□□□□□ -0.95
LOH1YJL038C EPS1P40557 701 aa9.09□□□□□ -0.95
LOH1YJL038C RSM7P47150 247 aa9.09□□□□□ -0.95
LOH1YJL038C BDF1P35817 686 aa9.05□□□□□ -0.96
LOH1YJL038C TGL3P40308 642 aa9.04□□□□□ -0.96
LOH1YJL038C BBC1P47068 1157 aa9.01□□□□□ -0.97
LOH1YJL038C AI2P03876 854 aa8.99□□□□□ -0.97
LOH1YJL038C YLR271WQ06152 274 aa8.96□□□□□ -0.98
LOH1YJL038C SSP1P38871 571 aa8.91□□□□□ -0.98
LOH1YJL038C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.86□□□□□ -0.99not detected
LOH1YJL038C BUD31P25337 157 aaPredicted RBP8.85□□□□□ -0.99
LOH1YJL038C PSD2P53037 1138 aaKnown RBP8.78□□□□□ -1
LOH1YJL038C UBP9P39967 754 aa8.75□□□□□ -1.01
LOH1YJL038C YOR238WQ08634 303 aa8.7□□□□□ -1.02
LOH1YJL038C MRM1P25270 412 aa8.69□□□□□ -1.02
LOH1YJL038C MGA2P40578 1113 aa8.67□□□□□ -1.02
LOH1YJL038C YAP5P40574 245 aa8.66□□□□□ -1.02
LOH1YJL038C CST9Q06032 482 aa8.66□□□□□ -1.02
LOH1YJL038C MST1P07236 462 aa8.64□□□□□ -1.03
LOH1YJL038C NSR1P27476 414 aaKnown RBP RIP-Chip data8.64□□□□□ -1.03not detected
LOH1YJL038C PIB1Q06651 286 aa8.54□□□□□ -1.04
LOH1YJL038C YBL029C-AQ3E756 94 aa8.54□□□□□ -1.04
LOH1YJL038C SIS1P25294 352 aaKnown RBP8.52□□□□□ -1.05
LOH1YJL038C RTG3P38165 486 aa8.52□□□□□ -1.05
LOH1YJL038C GTT3P39996 337 aa8.51□□□□□ -1.05
LOH1YJL038C WSC3Q12215 556 aa8.49□□□□□ -1.05
LOH1YJL038C VPS29P38759 282 aa8.45□□□□□ -1.06
LOH1YJL038C VNX1P42839 908 aa8.44□□□□□ -1.06
LOH1YJL038C YMR1P47147 688 aaKnown RBP RIP-Chip data8.44□□□□□ -1.06not detected
LOH1YJL038C RCR1P38212 213 aa8.43□□□□□ -1.06
LOH1YJL038C DBP1P24784 617 aaKnown RBP8.42□□□□□ -1.06
LOH1YJL038C YFR006WP43590 535 aa8.41□□□□□ -1.06
LOH1YJL038C SPP1Q03012 353 aa8.4□□□□□ -1.06
LOH1YJL038C STS1P38637 319 aa8.36□□□□□ -1.07
LOH1YJL038C TIF11P38912 153 aaKnown RBP8.31□□□□□ -1.08
LOH1YJL038C VMA1P17255 1071 aaKnown RBP8.28□□□□□ -1.08
LOH1YJL038C SET4P42948 560 aa8.27□□□□□ -1.09
LOH1YJL038C ULI1P43604 169 aa8.26□□□□□ -1.09
LOH1YJL038C YOL036WQ08206 761 aa8.25□□□□□ -1.09
LOH1YJL038C MSB4Q12317 492 aa8.24□□□□□ -1.09
LOH1YJL038C RAM2P29703 316 aa8.22□□□□□ -1.09
LOH1YJL038C EAP1P36041 632 aaKnown RBP8.21□□□□□ -1.1
LOH1YJL038C LDB19Q12502 818 aa8.2□□□□□ -1.1
LOH1YJL038C SAM3Q08986 587 aa8.19□□□□□ -1.1
LOH1YJL038C IOC2Q12072 812 aa8.18□□□□□ -1.1
LOH1YJL038C MAK11P20484 414 aaKnown RBP8.17□□□□□ -1.1
LOH1YJL038C MIF2P35201 549 aa8.16□□□□□ -1.1
LOH1YJL038C TRP5P00931 707 aaKnown RBP8.15□□□□□ -1.1
LOH1YJL038C GYP5Q12344 894 aa8.15□□□□□ -1.1
LOH1YJL038C FKH1P40466 484 aa8.12□□□□□ -1.11
LOH1YJL038C YJL171CP46992 396 aa8.12□□□□□ -1.11
LOH1YJL038C AIR2Q12476 344 aaKnown RBP8.12□□□□□ -1.11
LOH1YJL038C DCW1P36091 449 aa8.1□□□□□ -1.11
LOH1YJL038C RTG1P32607 177 aa8.08□□□□□ -1.12
LOH1YJL038C ABP1P15891 592 aaKnown RBP8.07□□□□□ -1.12
LOH1YJL038C COQ8P27697 501 aa8.07□□□□□ -1.12
LOH1YJL038C HTA1P04911 132 aaKnown RBP8.06□□□□□ -1.12
LOH1YJL038C HTA2P04912 132 aa8.06□□□□□ -1.12
LOH1YJL038C GRE2Q12068 342 aaKnown RBP8.06□□□□□ -1.12
LOH1YJL038C EDS1P38073 919 aa8.05□□□□□ -1.12
LOH1YJL038C YNL035CP53962 389 aaKnown RBP8.05□□□□□ -1.12
LOH1YJL038C PTC3P34221 468 aaKnown RBP8.04□□□□□ -1.12
LOH1YJL038C NCR1Q12200 1170 aa8.04□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms