RNA–Protein interactions for RNA: YHR003C

TCD1, Transcript of tRNA threonylcarbamoyladenosine dehydratase, yeastyeast

Gene TCD1, Length 1,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCD1YHR003C YNL035CP53962 389 aaKnown RBP6.16□□□□□ -1.42
TCD1YHR003C IFH1P39520 1085 aa6.15□□□□□ -1.42
TCD1YHR003C FKH1P40466 484 aa6.15□□□□□ -1.42
TCD1YHR003C JIP4Q03361 876 aa6.15□□□□□ -1.42
TCD1YHR003C RTG1P32607 177 aa6.14□□□□□ -1.43
TCD1YHR003C PTC4P38089 393 aa6.13□□□□□ -1.43
TCD1YHR003C YEL023CP39992 682 aa6.13□□□□□ -1.43
TCD1YHR003C SEC61P32915 480 aa6.12□□□□□ -1.43
TCD1YHR003C AIR2Q12476 344 aaKnown RBP6.12□□□□□ -1.43
TCD1YHR003C DAN4P47179 1161 aa6.11□□□□□ -1.43
TCD1YHR003C NCR1Q12200 1170 aa6.11□□□□□ -1.43
TCD1YHR003C TFG1P41895 735 aaPredicted RBP6.09□□□□□ -1.43
TCD1YHR003C SOL3P38858 249 aa6.08□□□□□ -1.44
TCD1YHR003C YJL171CP46992 396 aa6.08□□□□□ -1.44
TCD1YHR003C YGR273CP53329 174 aa6.08□□□□□ -1.44
TCD1YHR003C NST1P53935 1240 aa6.08□□□□□ -1.44
TCD1YHR003C YPR148CQ06523 435 aa6.08□□□□□ -1.44
TCD1YHR003C AI4P03878 556 aa6.05□□□□□ -1.44
TCD1YHR003C MPH3P0CE00 602 aa6.05□□□□□ -1.44
TCD1YHR003C BMT6Q12291 365 aa6.04□□□□□ -1.44
TCD1YHR003C VPS70P47161 811 aa6.03□□□□□ -1.44
TCD1YHR003C SAS10Q12136 610 aaPredicted RBP6.03□□□□□ -1.44
TCD1YHR003C YDL129WQ07555 291 aa6.02□□□□□ -1.45
TCD1YHR003C CKB1P43639 278 aa5.99□□□□□ -1.45
TCD1YHR003C PML39Q03760 334 aa5.99□□□□□ -1.45
TCD1YHR003C KEX1P09620 729 aa5.98□□□□□ -1.45
TCD1YHR003C UBP14P38237 781 aaKnown RBP5.98□□□□□ -1.45
TCD1YHR003C SAP30P38429 201 aa5.98□□□□□ -1.45
TCD1YHR003C ILV3P39522 585 aaKnown RBP5.98□□□□□ -1.45
TCD1YHR003C REF2P42073 533 aaPredicted RBP5.98□□□□□ -1.45
TCD1YHR003C VHR2P40041 505 aa5.97□□□□□ -1.45
TCD1YHR003C YLR326WQ06170 240 aaKnown RBP5.97□□□□□ -1.45
TCD1YHR003C MID1P41821 548 aa5.94□□□□□ -1.46
TCD1YHR003C RAD54P32863 898 aa5.93□□□□□ -1.46
TCD1YHR003C SLI15P38283 698 aa5.93□□□□□ -1.46
TCD1YHR003C PCS60P38137 543 aaKnown RBP RIP-Chip data5.92□□□□□ -1.46not detected
TCD1YHR003C MAK21Q12176 1025 aaKnown RBP5.92□□□□□ -1.46
TCD1YHR003C KIC1P38692 1080 aa5.91□□□□□ -1.46
TCD1YHR003C YDR090CQ03193 310 aa5.91□□□□□ -1.46
TCD1YHR003C PEX29Q03370 554 aa5.91□□□□□ -1.46
TCD1YHR003C COX6P00427 148 aa5.9□□□□□ -1.46
TCD1YHR003C CHL1P22516 861 aaPredicted RBP5.89□□□□□ -1.47
TCD1YHR003C PRE3P38624 215 aa5.89□□□□□ -1.47
TCD1YHR003C ARH1P48360 493 aa5.89□□□□□ -1.47
TCD1YHR003C PBS2P08018 668 aa5.88□□□□□ -1.47
TCD1YHR003C RPP1BP10622 106 aaKnown RBP5.88□□□□□ -1.47
TCD1YHR003C MPC54Q08550 464 aa5.88□□□□□ -1.47
TCD1YHR003C ELP4Q02884 456 aaKnown RBP5.87□□□□□ -1.47
TCD1YHR003C DPL1Q05567 589 aa5.87□□□□□ -1.47
TCD1YHR003C SPB4P25808 606 aaPredicted RBP5.85□□□□□ -1.47
TCD1YHR003C DSF2P38213 736 aa5.85□□□□□ -1.47
TCD1YHR003C NMA111P53920 997 aa5.84□□□□□ -1.47
TCD1YHR003C HAP5Q02516 242 aa5.84□□□□□ -1.47
TCD1YHR003C YDR344CQ05510 147 aa5.84□□□□□ -1.47
TCD1YHR003C CDC73Q06697 393 aa5.84□□□□□ -1.47
TCD1YHR003C SPT23P35210 1082 aa5.82□□□□□ -1.48
TCD1YHR003C ISU2Q12056 156 aa5.82□□□□□ -1.48
TCD1YHR003C MAM3Q12296 706 aa5.82□□□□□ -1.48
TCD1YHR003C BNI4P53858 892 aa5.8□□□□□ -1.48
TCD1YHR003C ORC6P38826 435 aa5.79□□□□□ -1.48
TCD1YHR003C CSC1Q06538 782 aa5.79□□□□□ -1.48
TCD1YHR003C GAP1P19145 602 aaPredicted RBP5.78□□□□□ -1.48
TCD1YHR003C PEX21P50091 288 aa5.77□□□□□ -1.49
TCD1YHR003C TFB4Q12004 338 aa5.77□□□□□ -1.49
TCD1YHR003C PTC2P39966 464 aaKnown RBP5.76□□□□□ -1.49
TCD1YHR003C IES2P40154 320 aa5.76□□□□□ -1.49
TCD1YHR003C BCK2P33306 851 aa5.75□□□□□ -1.49
TCD1YHR003C YML082WQ04533 649 aaKnown RBP5.75□□□□□ -1.49
TCD1YHR003C PSE1P32337 1089 aaKnown RBP5.74□□□□□ -1.49
TCD1YHR003C VRP1P37370 817 aa5.73□□□□□ -1.49
TCD1YHR003C MVP1P40959 511 aaKnown RBP5.73□□□□□ -1.49
TCD1YHR003C NUP42P49686 430 aaKnown RBP5.73□□□□□ -1.49
TCD1YHR003C RGR1P19263 1082 aa5.72□□□□□ -1.49
TCD1YHR003C TUM1Q08686 304 aaKnown RBP5.72□□□□□ -1.49
TCD1YHR003C YRR1Q12172 810 aa5.72□□□□□ -1.49
TCD1YHR003C PDR1P12383 1068 aa5.7□□□□□ -1.5
TCD1YHR003C DIT2P21595 489 aa5.7□□□□□ -1.5
TCD1YHR003C RAM1P22007 431 aa5.69□□□□□ -1.5
TCD1YHR003C YPR109WQ06104 294 aa5.69□□□□□ -1.5
TCD1YHR003C LEU3P08638 886 aa5.68□□□□□ -1.5
TCD1YHR003C CLB5P30283 435 aa5.68□□□□□ -1.5
TCD1YHR003C XDJ1P39102 459 aa5.67□□□□□ -1.5
TCD1YHR003C YNR021WP53723 404 aaKnown RBP5.66□□□□□ -1.5
TCD1YHR003C YPR015CQ12531 247 aa5.66□□□□□ -1.5
TCD1YHR003C NUD1P32336 851 aa5.65□□□□□ -1.5
TCD1YHR003C NPL4P33755 580 aa5.64□□□□□ -1.51
TCD1YHR003C RGA2Q06407 1009 aa5.64□□□□□ -1.51
TCD1YHR003C TEA1P47988 759 aa5.63□□□□□ -1.51
TCD1YHR003C STR2P47164 639 aa5.62□□□□□ -1.51
TCD1YHR003C ATF2P53296 535 aa5.62□□□□□ -1.51
TCD1YHR003C SAS4Q04003 481 aa5.62□□□□□ -1.51
TCD1YHR003C GYP1Q08484 637 aa5.62□□□□□ -1.51
TCD1YHR003C ISM1P48526 1002 aa5.61□□□□□ -1.51
TCD1YHR003C BUD20Q08004 166 aaPredicted RBP5.61□□□□□ -1.51
TCD1YHR003C PRT1P06103 763 aaKnown RBP5.6□□□□□ -1.51
TCD1YHR003C GLC3P32775 704 aa5.6□□□□□ -1.51
TCD1YHR003C AIM7Q12156 149 aa5.59□□□□□ -1.51
TCD1YHR003C GCD11P32481 527 aaKnown RBP5.58□□□□□ -1.52
TCD1YHR003C RPN1P38764 993 aaKnown RBP5.57□□□□□ -1.52
TCD1YHR003C SIT4P20604 311 aa5.56□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms