RNA–Protein interactions for RNA: YGL025C

PGD1, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene PGD1, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PGD1YGL025C SOL3P38858 249 aa7.86□□□□□ -1.15
PGD1YGL025C LDB19Q12502 818 aa7.86□□□□□ -1.15
PGD1YGL025C NST1P53935 1240 aa7.85□□□□□ -1.15
PGD1YGL025C SAS10Q12136 610 aaPredicted RBP7.85□□□□□ -1.15
PGD1YGL025C IFH1P39520 1085 aa7.84□□□□□ -1.15
PGD1YGL025C YEL023CP39992 682 aa7.81□□□□□ -1.16
PGD1YGL025C FKH1P40466 484 aa7.81□□□□□ -1.16
PGD1YGL025C DAN4P47179 1161 aa7.81□□□□□ -1.16
PGD1YGL025C RTG1P32607 177 aa7.8□□□□□ -1.16
PGD1YGL025C VPS70P47161 811 aa7.8□□□□□ -1.16
PGD1YGL025C YGR273CP53329 174 aa7.8□□□□□ -1.16
PGD1YGL025C YNL035CP53962 389 aaKnown RBP7.8□□□□□ -1.16
PGD1YGL025C PTC4P38089 393 aa7.79□□□□□ -1.16
PGD1YGL025C JIP4Q03361 876 aa7.79□□□□□ -1.16
PGD1YGL025C AIR2Q12476 344 aaKnown RBP7.78□□□□□ -1.16
PGD1YGL025C SEC61P32915 480 aa7.75□□□□□ -1.17
PGD1YGL025C ILV3P39522 585 aaKnown RBP7.75□□□□□ -1.17
PGD1YGL025C MPH3P0CE00 602 aa7.74□□□□□ -1.17
PGD1YGL025C AI4P03878 556 aa7.73□□□□□ -1.17
PGD1YGL025C NCR1Q12200 1170 aa7.73□□□□□ -1.17
PGD1YGL025C UBP14P38237 781 aaKnown RBP7.72□□□□□ -1.17
PGD1YGL025C VHR2P40041 505 aa7.7□□□□□ -1.18
PGD1YGL025C YLR326WQ06170 240 aaKnown RBP7.7□□□□□ -1.18
PGD1YGL025C KEX1P09620 729 aa7.69□□□□□ -1.18
PGD1YGL025C REF2P42073 533 aaPredicted RBP7.69□□□□□ -1.18
PGD1YGL025C CKB1P43639 278 aa7.69□□□□□ -1.18
PGD1YGL025C YDR090CQ03193 310 aa7.66□□□□□ -1.18
PGD1YGL025C TFG1P41895 735 aaPredicted RBP7.64□□□□□ -1.19
PGD1YGL025C PML39Q03760 334 aa7.64□□□□□ -1.19
PGD1YGL025C PCS60P38137 543 aaKnown RBP RIP-Chip data7.63□□□□□ -1.19not detected
PGD1YGL025C YDL129WQ07555 291 aa7.63□□□□□ -1.19
PGD1YGL025C SLI15P38283 698 aa7.62□□□□□ -1.19
PGD1YGL025C MID1P41821 548 aa7.62□□□□□ -1.19
PGD1YGL025C YJL171CP46992 396 aa7.61□□□□□ -1.19
PGD1YGL025C BMT6Q12291 365 aa7.61□□□□□ -1.19
PGD1YGL025C PBS2P08018 668 aa7.6□□□□□ -1.19
PGD1YGL025C RAD54P32863 898 aa7.6□□□□□ -1.19
PGD1YGL025C COX6P00427 148 aa7.59□□□□□ -1.19
PGD1YGL025C SAP30P38429 201 aa7.59□□□□□ -1.19
PGD1YGL025C MAK21Q12176 1025 aaKnown RBP7.57□□□□□ -1.2
PGD1YGL025C DSF2P38213 736 aa7.56□□□□□ -1.2
PGD1YGL025C YDR344CQ05510 147 aa7.55□□□□□ -1.2
PGD1YGL025C SPB4P25808 606 aaPredicted RBP7.54□□□□□ -1.2
PGD1YGL025C KIC1P38692 1080 aa7.54□□□□□ -1.2
PGD1YGL025C MPC54Q08550 464 aa7.52□□□□□ -1.21
PGD1YGL025C PEX29Q03370 554 aa7.51□□□□□ -1.21
PGD1YGL025C CDC73Q06697 393 aa7.51□□□□□ -1.21
PGD1YGL025C DPL1Q05567 589 aa7.49□□□□□ -1.21
PGD1YGL025C MAM3Q12296 706 aa7.49□□□□□ -1.21
PGD1YGL025C ARH1P48360 493 aa7.48□□□□□ -1.21
PGD1YGL025C ORC6P38826 435 aa7.47□□□□□ -1.21
PGD1YGL025C GAP1P19145 602 aaPredicted RBP7.46□□□□□ -1.22
PGD1YGL025C NMA111P53920 997 aa7.46□□□□□ -1.22
PGD1YGL025C PRE3P38624 215 aa7.45□□□□□ -1.22
PGD1YGL025C IES2P40154 320 aa7.45□□□□□ -1.22
PGD1YGL025C NUP42P49686 430 aaKnown RBP7.44□□□□□ -1.22
PGD1YGL025C HAP5Q02516 242 aa7.43□□□□□ -1.22
PGD1YGL025C ELP4Q02884 456 aaKnown RBP7.43□□□□□ -1.22
PGD1YGL025C ISU2Q12056 156 aa7.43□□□□□ -1.22
PGD1YGL025C CHL1P22516 861 aaPredicted RBP7.42□□□□□ -1.22
PGD1YGL025C RPP1BP10622 106 aaKnown RBP7.41□□□□□ -1.22
PGD1YGL025C DIT2P21595 489 aa7.41□□□□□ -1.22
PGD1YGL025C LEU3P08638 886 aa7.4□□□□□ -1.22
PGD1YGL025C CSC1Q06538 782 aa7.4□□□□□ -1.22
PGD1YGL025C RGR1P19263 1082 aa7.38□□□□□ -1.23
PGD1YGL025C SPT23P35210 1082 aa7.38□□□□□ -1.23
PGD1YGL025C MVP1P40959 511 aaKnown RBP7.38□□□□□ -1.23
PGD1YGL025C PSE1P32337 1089 aaKnown RBP7.37□□□□□ -1.23
PGD1YGL025C BNI4P53858 892 aa7.37□□□□□ -1.23
PGD1YGL025C TFB4Q12004 338 aa7.36□□□□□ -1.23
PGD1YGL025C PEX21P50091 288 aa7.34□□□□□ -1.23
PGD1YGL025C PDR1P12383 1068 aa7.33□□□□□ -1.24
PGD1YGL025C RAM1P22007 431 aa7.33□□□□□ -1.24
PGD1YGL025C YNR021WP53723 404 aaKnown RBP7.33□□□□□ -1.24
PGD1YGL025C YRR1Q12172 810 aa7.33□□□□□ -1.24
PGD1YGL025C YPR109WQ06104 294 aa7.32□□□□□ -1.24
PGD1YGL025C TUM1Q08686 304 aaKnown RBP7.32□□□□□ -1.24
PGD1YGL025C YML082WQ04533 649 aaKnown RBP7.31□□□□□ -1.24
PGD1YGL025C PTC2P39966 464 aaKnown RBP7.3□□□□□ -1.24
PGD1YGL025C YPR015CQ12531 247 aa7.29□□□□□ -1.24
PGD1YGL025C GLC3P32775 704 aa7.28□□□□□ -1.24
PGD1YGL025C BCK2P33306 851 aa7.25□□□□□ -1.25
PGD1YGL025C VRP1P37370 817 aa7.25□□□□□ -1.25
PGD1YGL025C NUD1P32336 851 aa7.24□□□□□ -1.25
PGD1YGL025C CLB5P30283 435 aa7.23□□□□□ -1.25
PGD1YGL025C RPN1P38764 993 aaKnown RBP7.23□□□□□ -1.25
PGD1YGL025C STR2P47164 639 aa7.23□□□□□ -1.25
PGD1YGL025C TEA1P47988 759 aa7.23□□□□□ -1.25
PGD1YGL025C ISM1P48526 1002 aa7.22□□□□□ -1.25
PGD1YGL025C ATF2P53296 535 aa7.22□□□□□ -1.25
PGD1YGL025C BUD20Q08004 166 aaPredicted RBP7.21□□□□□ -1.26
PGD1YGL025C AIM7Q12156 149 aa7.21□□□□□ -1.26
PGD1YGL025C NIS1P53939 407 aa7.18□□□□□ -1.26
PGD1YGL025C SIT4P20604 311 aa7.17□□□□□ -1.26
PGD1YGL025C XDJ1P39102 459 aa7.16□□□□□ -1.26
PGD1YGL025C ERF2Q06551 359 aa7.16□□□□□ -1.26
PGD1YGL025C TY1A-DR4O74302 440 aa7.15□□□□□ -1.26
PGD1YGL025C TY1A-HP0C2I4 478 aaKnown RBP7.15□□□□□ -1.26
PGD1YGL025C TY1A-AP0CX57 440 aa7.15□□□□□ -1.26
PGD1YGL025C TY1A-PR1P0CX58 440 aa7.15□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms