RNA–Protein interactions for RNA: YGL025C

PGD1, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene PGD1, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PGD1YGL025C MTC1P47018 478 aaKnown RBP13.19□□□□□ -0.3
PGD1YGL025C DRS1P32892 752 aaKnown RBP12.84□□□□□ -0.35
PGD1YGL025C FAP1P53971 965 aa11.19□□□□□ -0.62
PGD1YGL025C DIP2Q12220 943 aaPredicted RBP11.08□□□□□ -0.64
PGD1YGL025C BFR2Q06631 534 aaKnown RBP10.94□□□□□ -0.66
PGD1YGL025C AVT3P36062 692 aa10.86□□□□□ -0.67
PGD1YGL025C PRI1P10363 409 aa10.82□□□□□ -0.68
PGD1YGL025C ISW2Q08773 1120 aa10.78□□□□□ -0.68
PGD1YGL025C RPG1P38249 964 aaKnown RBP10.68□□□□□ -0.7
PGD1YGL025C AAD16Q02895 342 aa10.67□□□□□ -0.7
PGD1YGL025C RSE1Q04693 1361 aaKnown RBP10.54□□□□□ -0.72
PGD1YGL025C PRY3P47033 881 aa10.52□□□□□ -0.73
PGD1YGL025C TSR3Q12094 313 aaKnown RBP10.25□□□□□ -0.77
PGD1YGL025C RPL17AP05740 184 aaKnown RBP10.19□□□□□ -0.78
PGD1YGL025C RPL17BP46990 184 aaKnown RBP10.19□□□□□ -0.78
PGD1YGL025C TFA1P36100 482 aa10.07□□□□□ -0.8
PGD1YGL025C REB1P21538 810 aa10.06□□□□□ -0.8
PGD1YGL025C YCK3P39962 524 aa10.05□□□□□ -0.8
PGD1YGL025C HAA1Q12753 694 aaKnown RBP9.9□□□□□ -0.82
PGD1YGL025C MRPL32P25348 183 aa9.82□□□□□ -0.84
PGD1YGL025C SPT21P35209 758 aa9.82□□□□□ -0.84
PGD1YGL025C RIM101P33400 625 aa9.6□□□□□ -0.87
PGD1YGL025C YKR023WP36119 530 aaKnown RBP9.59□□□□□ -0.87
PGD1YGL025C CDC27P38042 758 aa9.48□□□□□ -0.89
PGD1YGL025C HOP09932 586 aa9.37□□□□□ -0.91
PGD1YGL025C TFC8Q12308 588 aa9.37□□□□□ -0.91
PGD1YGL025C DCD1P06773 312 aa9.31□□□□□ -0.92
PGD1YGL025C OXP1P28273 1286 aa9.31□□□□□ -0.92
PGD1YGL025C YGL015CP33199 130 aa9.27□□□□□ -0.93
PGD1YGL025C BCH2P36122 765 aa9.1□□□□□ -0.95
PGD1YGL025C MAP2P38174 421 aaKnown RBP9.1□□□□□ -0.95
PGD1YGL025C YIL055CP40523 627 aaKnown RBP9.1□□□□□ -0.95
PGD1YGL025C UBP10P53874 792 aaPredicted RBP9.1□□□□□ -0.95
PGD1YGL025C PTP3P40048 928 aa9.07□□□□□ -0.96
PGD1YGL025C YAH1Q12184 172 aaKnown RBP9.06□□□□□ -0.96
PGD1YGL025C SCY1P53009 804 aa9.01□□□□□ -0.97
PGD1YGL025C RSM7P47150 247 aa9□□□□□ -0.97
PGD1YGL025C SSP1P38871 571 aa8.97□□□□□ -0.97
PGD1YGL025C YLR271WQ06152 274 aa8.97□□□□□ -0.97
PGD1YGL025C EPS1P40557 701 aa8.91□□□□□ -0.98
PGD1YGL025C AI2P03876 854 aa8.87□□□□□ -0.99
PGD1YGL025C BDF1P35817 686 aa8.85□□□□□ -0.99
PGD1YGL025C SLX5P32828 619 aaKnown RBP8.84□□□□□ -0.99
PGD1YGL025C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.83□□□□□ -1not detected
PGD1YGL025C BBC1P47068 1157 aa8.8□□□□□ -1
PGD1YGL025C PSD2P53037 1138 aaKnown RBP8.77□□□□□ -1.01
PGD1YGL025C TIF4632P39936 914 aaKnown RBP8.69□□□□□ -1.02
PGD1YGL025C TGL3P40308 642 aa8.69□□□□□ -1.02
PGD1YGL025C MGA2P40578 1113 aa8.69□□□□□ -1.02
PGD1YGL025C CST9Q06032 482 aa8.67□□□□□ -1.02
PGD1YGL025C MRM1P25270 412 aa8.58□□□□□ -1.04
PGD1YGL025C NSR1P27476 414 aaKnown RBP RIP-Chip data8.47□□□□□ -1.05not detected
PGD1YGL025C RTG3P38165 486 aa8.43□□□□□ -1.06
PGD1YGL025C RCR1P38212 213 aa8.42□□□□□ -1.06
PGD1YGL025C MST1P07236 462 aa8.41□□□□□ -1.06
PGD1YGL025C VPS29P38759 282 aa8.41□□□□□ -1.06
PGD1YGL025C YAP5P40574 245 aa8.4□□□□□ -1.06
PGD1YGL025C YOR238WQ08634 303 aa8.38□□□□□ -1.07
PGD1YGL025C YMR1P47147 688 aaKnown RBP RIP-Chip data8.33□□□□□ -1.08not detected
PGD1YGL025C RAM2P29703 316 aa8.32□□□□□ -1.08
PGD1YGL025C STS1P38637 319 aa8.29□□□□□ -1.08
PGD1YGL025C PIB1Q06651 286 aa8.29□□□□□ -1.08
PGD1YGL025C DBP1P24784 617 aaKnown RBP8.28□□□□□ -1.08
PGD1YGL025C YFR006WP43590 535 aa8.27□□□□□ -1.09
PGD1YGL025C BUD31P25337 157 aaPredicted RBP8.26□□□□□ -1.09
PGD1YGL025C UBP9P39967 754 aa8.21□□□□□ -1.1
PGD1YGL025C MAK11P20484 414 aaKnown RBP8.19□□□□□ -1.1
PGD1YGL025C VMA1P17255 1071 aaKnown RBP8.16□□□□□ -1.1
PGD1YGL025C GTT3P39996 337 aa8.16□□□□□ -1.1
PGD1YGL025C YBL029C-AQ3E756 94 aa8.15□□□□□ -1.1
PGD1YGL025C DMA1P38823 416 aa8.13□□□□□ -1.11
PGD1YGL025C WSC3Q12215 556 aa8.12□□□□□ -1.11
PGD1YGL025C VNX1P42839 908 aa8.11□□□□□ -1.11
PGD1YGL025C SAM3Q08986 587 aa8.1□□□□□ -1.11
PGD1YGL025C COQ8P27697 501 aa8.09□□□□□ -1.11
PGD1YGL025C EDS1P38073 919 aa8.09□□□□□ -1.11
PGD1YGL025C MIF2P35201 549 aa8.07□□□□□ -1.12
PGD1YGL025C YOL036WQ08206 761 aa8.06□□□□□ -1.12
PGD1YGL025C PTC3P34221 468 aaKnown RBP8.02□□□□□ -1.13
PGD1YGL025C SET1P38827 1080 aaKnown RBP8.02□□□□□ -1.13
PGD1YGL025C SET4P42948 560 aa8.02□□□□□ -1.13
PGD1YGL025C SPP1Q03012 353 aa8.02□□□□□ -1.13
PGD1YGL025C MSB4Q12317 492 aa8.02□□□□□ -1.13
PGD1YGL025C RQC2Q12532 1038 aaKnown RBP8.01□□□□□ -1.13
PGD1YGL025C TIF11P38912 153 aaKnown RBP8□□□□□ -1.13
PGD1YGL025C NOP53Q12080 455 aaKnown RBP7.99□□□□□ -1.13
PGD1YGL025C GYP5Q12344 894 aa7.99□□□□□ -1.13
PGD1YGL025C ULI1P43604 169 aa7.95□□□□□ -1.14
PGD1YGL025C GRE2Q12068 342 aaKnown RBP7.95□□□□□ -1.14
PGD1YGL025C EAP1P36041 632 aaKnown RBP7.94□□□□□ -1.14
PGD1YGL025C IOC2Q12072 812 aa7.94□□□□□ -1.14
PGD1YGL025C ABP1P15891 592 aaKnown RBP7.92□□□□□ -1.14
PGD1YGL025C DCW1P36091 449 aa7.92□□□□□ -1.14
PGD1YGL025C TRP5P00931 707 aaKnown RBP7.91□□□□□ -1.14
PGD1YGL025C GUT1P32190 709 aa7.91□□□□□ -1.14
PGD1YGL025C ATH1P48016 1211 aa7.91□□□□□ -1.14
PGD1YGL025C SIS1P25294 352 aaKnown RBP7.9□□□□□ -1.14
PGD1YGL025C HTA1P04911 132 aaKnown RBP7.87□□□□□ -1.15
PGD1YGL025C HTA2P04912 132 aa7.87□□□□□ -1.15
PGD1YGL025C YPR148CQ06523 435 aa7.87□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms