RNA–Protein interactions for RNA: YDR425W

SNX41, Transcript of Sorting nexin, yeastyeast

Gene SNX41, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX41YDR425W HTA2P04912 132 aa5.49□□□□□ -1.53
SNX41YDR425W ATH1P48016 1211 aa5.49□□□□□ -1.53
SNX41YDR425W LDB19Q12502 818 aa5.49□□□□□ -1.53
SNX41YDR425W DCW1P36091 449 aa5.47□□□□□ -1.53
SNX41YDR425W IFH1P39520 1085 aa5.47□□□□□ -1.53
SNX41YDR425W YPR148CQ06523 435 aa5.47□□□□□ -1.53
SNX41YDR425W NST1P53935 1240 aa5.47□□□□□ -1.53
SNX41YDR425W JIP4Q03361 876 aa5.47□□□□□ -1.53
SNX41YDR425W DAN4P47179 1161 aa5.45□□□□□ -1.54
SNX41YDR425W YNL035CP53962 389 aaKnown RBP5.45□□□□□ -1.54
SNX41YDR425W SOL3P38858 249 aa5.45□□□□□ -1.54
SNX41YDR425W SEC61P32915 480 aa5.44□□□□□ -1.54
SNX41YDR425W PTC4P38089 393 aa5.44□□□□□ -1.54
SNX41YDR425W YEL023CP39992 682 aa5.44□□□□□ -1.54
SNX41YDR425W RTG1P32607 177 aa5.43□□□□□ -1.54
SNX41YDR425W SAS10Q12136 610 aaPredicted RBP5.43□□□□□ -1.54
SNX41YDR425W RGA2Q06407 1009 aa5.43□□□□□ -1.54
SNX41YDR425W YGR273CP53329 174 aa5.41□□□□□ -1.54
SNX41YDR425W AI4P03878 556 aa5.4□□□□□ -1.55
SNX41YDR425W MPH3P0CE00 602 aa5.39□□□□□ -1.55
SNX41YDR425W NCR1Q12200 1170 aa5.39□□□□□ -1.55
SNX41YDR425W ILV3P39522 585 aaKnown RBP5.37□□□□□ -1.55
SNX41YDR425W UBP14P38237 781 aaKnown RBP5.35□□□□□ -1.55
SNX41YDR425W VPS70P47161 811 aa5.35□□□□□ -1.55
SNX41YDR425W CKB1P43639 278 aa5.34□□□□□ -1.55
SNX41YDR425W YLR326WQ06170 240 aaKnown RBP5.34□□□□□ -1.55
SNX41YDR425W YDL129WQ07555 291 aa5.34□□□□□ -1.55
SNX41YDR425W KEX1P09620 729 aa5.33□□□□□ -1.56
SNX41YDR425W TFG1P41895 735 aaPredicted RBP5.33□□□□□ -1.56
SNX41YDR425W REF2P42073 533 aaPredicted RBP5.33□□□□□ -1.56
SNX41YDR425W VHR2P40041 505 aa5.3□□□□□ -1.56
SNX41YDR425W YDR090CQ03193 310 aa5.3□□□□□ -1.56
SNX41YDR425W PML39Q03760 334 aa5.3□□□□□ -1.56
SNX41YDR425W SLI15P38283 698 aa5.29□□□□□ -1.56
SNX41YDR425W MAK21Q12176 1025 aaKnown RBP5.29□□□□□ -1.56
SNX41YDR425W PCS60P38137 543 aaKnown RBP RIP-Chip data5.28□□□□□ -1.56not detected
SNX41YDR425W SAP30P38429 201 aa5.28□□□□□ -1.56
SNX41YDR425W COX6P00427 148 aa5.27□□□□□ -1.57
SNX41YDR425W MID1P41821 548 aa5.27□□□□□ -1.57
SNX41YDR425W RAD54P32863 898 aa5.26□□□□□ -1.57
SNX41YDR425W DSF2P38213 736 aa5.25□□□□□ -1.57
SNX41YDR425W PBS2P08018 668 aa5.24□□□□□ -1.57
SNX41YDR425W ARH1P48360 493 aa5.24□□□□□ -1.57
SNX41YDR425W MPC54Q08550 464 aa5.24□□□□□ -1.57
SNX41YDR425W BCK2P33306 851 aa5.23□□□□□ -1.57
SNX41YDR425W PRE3P38624 215 aa5.22□□□□□ -1.57
SNX41YDR425W KIC1P38692 1080 aa5.22□□□□□ -1.57
SNX41YDR425W YDR344CQ05510 147 aa5.22□□□□□ -1.57
SNX41YDR425W CHL1P22516 861 aaPredicted RBP5.22□□□□□ -1.57
SNX41YDR425W PEX29Q03370 554 aa5.22□□□□□ -1.57
SNX41YDR425W GAP1P19145 602 aaPredicted RBP5.21□□□□□ -1.58
SNX41YDR425W DPL1Q05567 589 aa5.21□□□□□ -1.58
SNX41YDR425W CDC73Q06697 393 aa5.2□□□□□ -1.58
SNX41YDR425W ORC6P38826 435 aa5.19□□□□□ -1.58
SNX41YDR425W HAP5Q02516 242 aa5.19□□□□□ -1.58
SNX41YDR425W RPP1BP10622 106 aaKnown RBP5.18□□□□□ -1.58
SNX41YDR425W NMA111P53920 997 aa5.18□□□□□ -1.58
SNX41YDR425W MAM3Q12296 706 aa5.18□□□□□ -1.58
SNX41YDR425W ISU2Q12056 156 aa5.17□□□□□ -1.58
SNX41YDR425W SPB4P25808 606 aaPredicted RBP5.17□□□□□ -1.58
SNX41YDR425W BNI4P53858 892 aa5.17□□□□□ -1.58
SNX41YDR425W ELP4Q02884 456 aaKnown RBP5.17□□□□□ -1.58
SNX41YDR425W SPT23P35210 1082 aa5.15□□□□□ -1.58
SNX41YDR425W CSC1Q06538 782 aa5.15□□□□□ -1.58
SNX41YDR425W NUP42P49686 430 aaKnown RBP5.15□□□□□ -1.59
SNX41YDR425W TFB4Q12004 338 aa5.14□□□□□ -1.59
SNX41YDR425W IES2P40154 320 aa5.13□□□□□ -1.59
SNX41YDR425W PSE1P32337 1089 aaKnown RBP5.13□□□□□ -1.59
SNX41YDR425W YML082WQ04533 649 aaKnown RBP5.13□□□□□ -1.59
SNX41YDR425W LEU3P08638 886 aa5.12□□□□□ -1.59
SNX41YDR425W MVP1P40959 511 aaKnown RBP5.11□□□□□ -1.59
SNX41YDR425W RGR1P19263 1082 aa5.11□□□□□ -1.59
SNX41YDR425W RAM1P22007 431 aa5.11□□□□□ -1.59
SNX41YDR425W PTC2P39966 464 aaKnown RBP5.1□□□□□ -1.59
SNX41YDR425W DIT2P21595 489 aa5.09□□□□□ -1.59
SNX41YDR425W PEX21P50091 288 aa5.09□□□□□ -1.6
SNX41YDR425W YNR021WP53723 404 aaKnown RBP5.07□□□□□ -1.6
SNX41YDR425W PDR1P12383 1068 aa5.07□□□□□ -1.6
SNX41YDR425W TUM1Q08686 304 aaKnown RBP5.07□□□□□ -1.6
SNX41YDR425W YRR1Q12172 810 aa5.07□□□□□ -1.6
SNX41YDR425W YPR015CQ12531 247 aa5.07□□□□□ -1.6
SNX41YDR425W CLB5P30283 435 aa5.06□□□□□ -1.6
SNX41YDR425W VRP1P37370 817 aa5.06□□□□□ -1.6
SNX41YDR425W YPR109WQ06104 294 aa5.06□□□□□ -1.6
SNX41YDR425W RGA1P39083 1007 aa5.05□□□□□ -1.6
SNX41YDR425W XDJ1P39102 459 aa5.03□□□□□ -1.6
SNX41YDR425W NUD1P32336 851 aa5.02□□□□□ -1.61
SNX41YDR425W STR2P47164 639 aa5.02□□□□□ -1.61
SNX41YDR425W AIM7Q12156 149 aa5.02□□□□□ -1.61
SNX41YDR425W TEA1P47988 759 aa5□□□□□ -1.61
SNX41YDR425W ISM1P48526 1002 aa5□□□□□ -1.61
SNX41YDR425W BUD20Q08004 166 aaPredicted RBP5□□□□□ -1.61
SNX41YDR425W DPS1P04802 557 aaKnown RBP5□□□□□ -1.61
SNX41YDR425W SIT4P20604 311 aa4.99□□□□□ -1.61
SNX41YDR425W GLC3P32775 704 aa4.99□□□□□ -1.61
SNX41YDR425W SAS4Q04003 481 aa4.98□□□□□ -1.61
SNX41YDR425W RPN1P38764 993 aaKnown RBP4.98□□□□□ -1.61
SNX41YDR425W ATF2P53296 535 aa4.98□□□□□ -1.61
SNX41YDR425W TY1A-DR4O74302 440 aa4.97□□□□□ -1.61
SNX41YDR425W TY1A-HP0C2I4 478 aaKnown RBP4.97□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms