RNA–Protein interactions for RNA: YDR268W

MSW1, Transcript of Mitochondrial tryptophanyl-tRNA synthetase, yeastyeast

Gene MSW1, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSW1YDR268W YEL023CP39992 682 aa8.03□□□□□ -1.12
MSW1YDR268W GRE2Q12068 342 aaKnown RBP8.03□□□□□ -1.12
MSW1YDR268W PTC4P38089 393 aa8.02□□□□□ -1.13
MSW1YDR268W MIF2P35201 549 aa8□□□□□ -1.13
MSW1YDR268W YDL129WQ07555 291 aa8□□□□□ -1.13
MSW1YDR268W EDS1P38073 919 aa7.99□□□□□ -1.13
MSW1YDR268W SAP30P38429 201 aa7.99□□□□□ -1.13
MSW1YDR268W PTC3P34221 468 aaKnown RBP7.97□□□□□ -1.13
MSW1YDR268W COQ8P27697 501 aa7.95□□□□□ -1.14
MSW1YDR268W GUT1P32190 709 aa7.95□□□□□ -1.14
MSW1YDR268W ATH1P48016 1211 aa7.95□□□□□ -1.14
MSW1YDR268W INO80P53115 1489 aa7.94□□□□□ -1.14
MSW1YDR268W MON2P48563 1636 aaPredicted RBP7.93□□□□□ -1.14
MSW1YDR268W CHL1P22516 861 aaPredicted RBP7.9□□□□□ -1.14
MSW1YDR268W PRE3P38624 215 aa7.89□□□□□ -1.15
MSW1YDR268W NST1P53935 1240 aa7.88□□□□□ -1.15
MSW1YDR268W PML39Q03760 334 aa7.86□□□□□ -1.15
MSW1YDR268W NOP53Q12080 455 aaKnown RBP7.86□□□□□ -1.15
MSW1YDR268W RQC2Q12532 1038 aaKnown RBP7.85□□□□□ -1.15
MSW1YDR268W BCK2P33306 851 aa7.83□□□□□ -1.16
MSW1YDR268W SOL3P38858 249 aa7.83□□□□□ -1.16
MSW1YDR268W AI4P03878 556 aa7.8□□□□□ -1.16
MSW1YDR268W MPH3P0CE00 602 aa7.8□□□□□ -1.16
MSW1YDR268W YDR344CQ05510 147 aa7.79□□□□□ -1.16
MSW1YDR268W ELP4Q02884 456 aaKnown RBP7.76□□□□□ -1.17
MSW1YDR268W ILV3P39522 585 aaKnown RBP7.75□□□□□ -1.17
MSW1YDR268W MID1P41821 548 aa7.75□□□□□ -1.17
MSW1YDR268W ARH1P48360 493 aa7.75□□□□□ -1.17
MSW1YDR268W YGR273CP53329 174 aa7.75□□□□□ -1.17
MSW1YDR268W PEX29Q03370 554 aa7.71□□□□□ -1.18
MSW1YDR268W VRP1P37370 817 aa7.69□□□□□ -1.18
MSW1YDR268W SPT23P35210 1082 aa7.66□□□□□ -1.18
MSW1YDR268W XDJ1P39102 459 aa7.66□□□□□ -1.18
MSW1YDR268W HAP5Q02516 242 aa7.65□□□□□ -1.18
MSW1YDR268W SET1P38827 1080 aaKnown RBP7.64□□□□□ -1.19
MSW1YDR268W MPC54Q08550 464 aa7.63□□□□□ -1.19
MSW1YDR268W SLI15P38283 698 aa7.61□□□□□ -1.19
MSW1YDR268W BNI4P53858 892 aa7.61□□□□□ -1.19
MSW1YDR268W KEX1P09620 729 aa7.59□□□□□ -1.19
MSW1YDR268W SWR1Q05471 1514 aa7.57□□□□□ -1.2
MSW1YDR268W DPL1Q05567 589 aa7.57□□□□□ -1.2
MSW1YDR268W YML082WQ04533 649 aaKnown RBP7.56□□□□□ -1.2
MSW1YDR268W DNA2P38859 1522 aa7.56□□□□□ -1.2
MSW1YDR268W PTC2P39966 464 aaKnown RBP7.55□□□□□ -1.2
MSW1YDR268W NMA111P53920 997 aa7.55□□□□□ -1.2
MSW1YDR268W TCB3Q03640 1545 aaKnown RBP7.54□□□□□ -1.2
MSW1YDR268W YLR326WQ06170 240 aaKnown RBP7.53□□□□□ -1.2
MSW1YDR268W DMA1P38823 416 aa7.52□□□□□ -1.21
MSW1YDR268W UBP14P38237 781 aaKnown RBP7.51□□□□□ -1.21
MSW1YDR268W DPS1P04802 557 aaKnown RBP7.5□□□□□ -1.21
MSW1YDR268W VHR2P40041 505 aa7.5□□□□□ -1.21
MSW1YDR268W TY1B-DR4Q07793 1604 aa7.49□□□□□ -1.21
MSW1YDR268W IFH1P39520 1085 aa7.49□□□□□ -1.21
MSW1YDR268W ISU2Q12056 156 aa7.49□□□□□ -1.21
MSW1YDR268W KOG1P38873 1557 aa7.47□□□□□ -1.21
MSW1YDR268W PCS60P38137 543 aaKnown RBP RIP-Chip data7.47□□□□□ -1.21not detected
MSW1YDR268W CDC73Q06697 393 aa7.47□□□□□ -1.21
MSW1YDR268W RAD54P32863 898 aa7.46□□□□□ -1.22
MSW1YDR268W RAM1P22007 431 aa7.43□□□□□ -1.22
MSW1YDR268W YPR148CQ06523 435 aa7.43□□□□□ -1.22
MSW1YDR268W YPR015CQ12531 247 aa7.43□□□□□ -1.22
MSW1YDR268W SGS1P35187 1447 aa7.43□□□□□ -1.22
MSW1YDR268W RPP1BP10622 106 aaKnown RBP7.41□□□□□ -1.22
MSW1YDR268W YDR090CQ03193 310 aa7.4□□□□□ -1.22
MSW1YDR268W PDR1P12383 1068 aa7.36□□□□□ -1.23
MSW1YDR268W KIC1P38692 1080 aa7.36□□□□□ -1.23
MSW1YDR268W REF2P42073 533 aaPredicted RBP7.36□□□□□ -1.23
MSW1YDR268W GYP1Q08484 637 aa7.33□□□□□ -1.24
MSW1YDR268W SRC1Q03707 834 aa7.32□□□□□ -1.24
MSW1YDR268W GAP1P19145 602 aaPredicted RBP7.31□□□□□ -1.24
MSW1YDR268W SAS4Q04003 481 aa7.3□□□□□ -1.24
MSW1YDR268W VPS70P47161 811 aa7.29□□□□□ -1.24
MSW1YDR268W CSC1Q06538 782 aa7.29□□□□□ -1.24
MSW1YDR268W HSL1P34244 1518 aa7.28□□□□□ -1.24
MSW1YDR268W PEX21P50091 288 aa7.28□□□□□ -1.24
MSW1YDR268W TFB4Q12004 338 aa7.28□□□□□ -1.24
MSW1YDR268W SPT6P23615 1451 aaKnown RBP7.28□□□□□ -1.24
MSW1YDR268W RAS1P01119 309 aa7.27□□□□□ -1.25
MSW1YDR268W YRR1Q12172 810 aa7.27□□□□□ -1.25
MSW1YDR268W MAK21Q12176 1025 aaKnown RBP7.27□□□□□ -1.25
MSW1YDR268W ORC6P38826 435 aa7.26□□□□□ -1.25
MSW1YDR268W SPA2P23201 1466 aaKnown RBP7.25□□□□□ -1.25
MSW1YDR268W AMS1P22855 1083 aa7.25□□□□□ -1.25
MSW1YDR268W COX6P00427 148 aa7.24□□□□□ -1.25
MSW1YDR268W SDH2P21801 266 aa7.24□□□□□ -1.25
MSW1YDR268W STR2P47164 639 aa7.22□□□□□ -1.25
MSW1YDR268W BUD20Q08004 166 aaPredicted RBP7.22□□□□□ -1.25
MSW1YDR268W TUM1Q08686 304 aaKnown RBP7.21□□□□□ -1.26
MSW1YDR268W PRT1P06103 763 aaKnown RBP7.2□□□□□ -1.26
MSW1YDR268W NUD1P32336 851 aa7.2□□□□□ -1.26
MSW1YDR268W ISM1P48526 1002 aa7.19□□□□□ -1.26
MSW1YDR268W YEL077CQ3E7X8 1277 aa7.19□□□□□ -1.26
MSW1YDR268W MRF1P30775 413 aaPredicted RBP7.18□□□□□ -1.26
MSW1YDR268W MVP1P40959 511 aaKnown RBP7.17□□□□□ -1.26
MSW1YDR268W CKB1P43639 278 aa7.16□□□□□ -1.26
MSW1YDR268W NPL4P33755 580 aa7.15□□□□□ -1.26
MSW1YDR268W TRK1P12685 1235 aa7.14□□□□□ -1.27
MSW1YDR268W RGR1P19263 1082 aa7.12□□□□□ -1.27
MSW1YDR268W HIR3P47171 1648 aa7.12□□□□□ -1.27
MSW1YDR268W TY1A-DR4O74302 440 aa7.11□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms