RNA–Protein interactions for RNA: YDR034C-C

YDR034C-C, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YDR034C-C, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR034C-CYDR034C-C VPS70P47161 811 aa9.17□□□□□ -0.94
YDR034C-CYDR034C-C YPR148CQ06523 435 aa9.17□□□□□ -0.94
YDR034C-CYDR034C-C IOC2Q12072 812 aa9.17□□□□□ -0.94
YDR034C-CYDR034C-C SAS10Q12136 610 aaPredicted RBP9.16□□□□□ -0.94
YDR034C-CYDR034C-C YEL023CP39992 682 aa9.15□□□□□ -0.94
YDR034C-CYDR034C-C JIP4Q03361 876 aa9.12□□□□□ -0.95
YDR034C-CYDR034C-C YNL035CP53962 389 aaKnown RBP9.11□□□□□ -0.95
YDR034C-CYDR034C-C RTG1P32607 177 aa9.09□□□□□ -0.95
YDR034C-CYDR034C-C PTC4P38089 393 aa9.09□□□□□ -0.95
YDR034C-CYDR034C-C CKB1P43639 278 aa9.08□□□□□ -0.96
YDR034C-CYDR034C-C YGR273CP53329 174 aa9.08□□□□□ -0.96
YDR034C-CYDR034C-C TFG1P41895 735 aaPredicted RBP9.06□□□□□ -0.96
YDR034C-CYDR034C-C SEC61P32915 480 aa9.05□□□□□ -0.96
YDR034C-CYDR034C-C SOL3P38858 249 aa9.05□□□□□ -0.96
YDR034C-CYDR034C-C FKH1P40466 484 aa9.05□□□□□ -0.96
YDR034C-CYDR034C-C REF2P42073 533 aaPredicted RBP9.04□□□□□ -0.96
YDR034C-CYDR034C-C NCR1Q12200 1170 aa9.03□□□□□ -0.96
YDR034C-CYDR034C-C AI4P03878 556 aa9.02□□□□□ -0.97
YDR034C-CYDR034C-C VHR2P40041 505 aa9.02□□□□□ -0.97
YDR034C-CYDR034C-C DAN4P47179 1161 aa9.02□□□□□ -0.97
YDR034C-CYDR034C-C MPH3P0CE00 602 aa9.01□□□□□ -0.97
YDR034C-CYDR034C-C NST1P53935 1240 aa9.01□□□□□ -0.97
YDR034C-CYDR034C-C YJL171CP46992 396 aa8.99□□□□□ -0.97
YDR034C-CYDR034C-C AIR2Q12476 344 aaKnown RBP8.99□□□□□ -0.97
YDR034C-CYDR034C-C KEX1P09620 729 aa8.97□□□□□ -0.97
YDR034C-CYDR034C-C SPB4P25808 606 aaPredicted RBP8.97□□□□□ -0.97
YDR034C-CYDR034C-C KIC1P38692 1080 aa8.96□□□□□ -0.98
YDR034C-CYDR034C-C YLR326WQ06170 240 aaKnown RBP8.96□□□□□ -0.98
YDR034C-CYDR034C-C PBS2P08018 668 aa8.95□□□□□ -0.98
YDR034C-CYDR034C-C UBP14P38237 781 aaKnown RBP8.95□□□□□ -0.98
YDR034C-CYDR034C-C PML39Q03760 334 aa8.94□□□□□ -0.98
YDR034C-CYDR034C-C RAD54P32863 898 aa8.93□□□□□ -0.98
YDR034C-CYDR034C-C MAK21Q12176 1025 aaKnown RBP8.93□□□□□ -0.98
YDR034C-CYDR034C-C ILV3P39522 585 aaKnown RBP8.92□□□□□ -0.98
YDR034C-CYDR034C-C YDL129WQ07555 291 aa8.92□□□□□ -0.98
YDR034C-CYDR034C-C BMT6Q12291 365 aa8.91□□□□□ -0.98
YDR034C-CYDR034C-C COX6P00427 148 aa8.88□□□□□ -0.99
YDR034C-CYDR034C-C SAP30P38429 201 aa8.88□□□□□ -0.99
YDR034C-CYDR034C-C PEX29Q03370 554 aa8.88□□□□□ -0.99
YDR034C-CYDR034C-C PCS60P38137 543 aaKnown RBP RIP-Chip data8.87□□□□□ -0.99not detected
YDR034C-CYDR034C-C SLI15P38283 698 aa8.86□□□□□ -0.99
YDR034C-CYDR034C-C YDR090CQ03193 310 aa8.86□□□□□ -0.99
YDR034C-CYDR034C-C DSF2P38213 736 aa8.85□□□□□ -0.99
YDR034C-CYDR034C-C MID1P41821 548 aa8.85□□□□□ -0.99
YDR034C-CYDR034C-C MAM3Q12296 706 aa8.85□□□□□ -0.99
YDR034C-CYDR034C-C RPP1BP10622 106 aaKnown RBP8.84□□□□□ -0.99
YDR034C-CYDR034C-C IES2P40154 320 aa8.79□□□□□ -1
YDR034C-CYDR034C-C MPC54Q08550 464 aa8.78□□□□□ -1
YDR034C-CYDR034C-C DPL1Q05567 589 aa8.77□□□□□ -1.01
YDR034C-CYDR034C-C ELP4Q02884 456 aaKnown RBP8.75□□□□□ -1.01
YDR034C-CYDR034C-C CDC73Q06697 393 aa8.74□□□□□ -1.01
YDR034C-CYDR034C-C LEU3P08638 886 aa8.73□□□□□ -1.01
YDR034C-CYDR034C-C ARH1P48360 493 aa8.71□□□□□ -1.02
YDR034C-CYDR034C-C PEX21P50091 288 aa8.71□□□□□ -1.02
YDR034C-CYDR034C-C NMA111P53920 997 aa8.71□□□□□ -1.02
YDR034C-CYDR034C-C HAP5Q02516 242 aa8.71□□□□□ -1.02
YDR034C-CYDR034C-C PRE3P38624 215 aa8.69□□□□□ -1.02
YDR034C-CYDR034C-C ORC6P38826 435 aa8.69□□□□□ -1.02
YDR034C-CYDR034C-C CHL1P22516 861 aaPredicted RBP8.68□□□□□ -1.02
YDR034C-CYDR034C-C CSC1Q06538 782 aa8.68□□□□□ -1.02
YDR034C-CYDR034C-C ISU2Q12056 156 aa8.68□□□□□ -1.02
YDR034C-CYDR034C-C NUP42P49686 430 aaKnown RBP8.67□□□□□ -1.02
YDR034C-CYDR034C-C YDR344CQ05510 147 aa8.65□□□□□ -1.02
YDR034C-CYDR034C-C DIT2P21595 489 aa8.64□□□□□ -1.03
YDR034C-CYDR034C-C PSE1P32337 1089 aaKnown RBP8.64□□□□□ -1.03
YDR034C-CYDR034C-C TFB4Q12004 338 aa8.64□□□□□ -1.03
YDR034C-CYDR034C-C SPT23P35210 1082 aa8.63□□□□□ -1.03
YDR034C-CYDR034C-C YNR021WP53723 404 aaKnown RBP8.62□□□□□ -1.03
YDR034C-CYDR034C-C GAP1P19145 602 aaPredicted RBP8.61□□□□□ -1.03
YDR034C-CYDR034C-C MVP1P40959 511 aaKnown RBP8.61□□□□□ -1.03
YDR034C-CYDR034C-C BNI4P53858 892 aa8.61□□□□□ -1.03
YDR034C-CYDR034C-C TUM1Q08686 304 aaKnown RBP8.6□□□□□ -1.03
YDR034C-CYDR034C-C RGR1P19263 1082 aa8.59□□□□□ -1.03
YDR034C-CYDR034C-C PTC2P39966 464 aaKnown RBP8.59□□□□□ -1.03
YDR034C-CYDR034C-C ATF2P53296 535 aa8.59□□□□□ -1.03
YDR034C-CYDR034C-C YRR1Q12172 810 aa8.58□□□□□ -1.04
YDR034C-CYDR034C-C GLC3P32775 704 aa8.57□□□□□ -1.04
YDR034C-CYDR034C-C CLB5P30283 435 aa8.56□□□□□ -1.04
YDR034C-CYDR034C-C RPN1P38764 993 aaKnown RBP8.56□□□□□ -1.04
YDR034C-CYDR034C-C YPR109WQ06104 294 aa8.55□□□□□ -1.04
YDR034C-CYDR034C-C TEA1P47988 759 aa8.54□□□□□ -1.04
YDR034C-CYDR034C-C PDR1P12383 1068 aa8.52□□□□□ -1.05
YDR034C-CYDR034C-C AIM7Q12156 149 aa8.51□□□□□ -1.05
YDR034C-CYDR034C-C NPL4P33755 580 aa8.5□□□□□ -1.05
YDR034C-CYDR034C-C YML082WQ04533 649 aaKnown RBP8.5□□□□□ -1.05
YDR034C-CYDR034C-C NUD1P32336 851 aa8.49□□□□□ -1.05
YDR034C-CYDR034C-C BCK2P33306 851 aa8.49□□□□□ -1.05
YDR034C-CYDR034C-C VRP1P37370 817 aa8.48□□□□□ -1.05
YDR034C-CYDR034C-C RAM1P22007 431 aa8.44□□□□□ -1.06
YDR034C-CYDR034C-C LEO1P38439 464 aa8.44□□□□□ -1.06
YDR034C-CYDR034C-C YMR196WQ04336 1088 aa8.43□□□□□ -1.06
YDR034C-CYDR034C-C KIN1P13185 1064 aa8.42□□□□□ -1.06
YDR034C-CYDR034C-C YPR015CQ12531 247 aa8.41□□□□□ -1.06
YDR034C-CYDR034C-C STR2P47164 639 aa8.4□□□□□ -1.06
YDR034C-CYDR034C-C GYP1Q08484 637 aa8.4□□□□□ -1.06
YDR034C-CYDR034C-C ISM1P48526 1002 aa8.39□□□□□ -1.07
YDR034C-CYDR034C-C NIS1P53939 407 aa8.39□□□□□ -1.07
YDR034C-CYDR034C-C GCD11P32481 527 aaKnown RBP8.38□□□□□ -1.07
YDR034C-CYDR034C-C PRT1P06103 763 aaKnown RBP8.35□□□□□ -1.07
YDR034C-CYDR034C-C KEX2P13134 814 aa8.35□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 58.4 ms