RNA–Protein interactions for RNA: YDR034C-C

YDR034C-C, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YDR034C-C, Length 1,317 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR034C-CYDR034C-C MTC1P47018 478 aaKnown RBP15.35■□□□□ 0.05
YDR034C-CYDR034C-C DRS1P32892 752 aaKnown RBP15.09■□□□□ 0.01
YDR034C-CYDR034C-C FAP1P53971 965 aa13.12□□□□□ -0.31
YDR034C-CYDR034C-C DIP2Q12220 943 aaPredicted RBP12.95□□□□□ -0.34
YDR034C-CYDR034C-C BFR2Q06631 534 aaKnown RBP12.89□□□□□ -0.35
YDR034C-CYDR034C-C ISW2Q08773 1120 aa12.63□□□□□ -0.39
YDR034C-CYDR034C-C AVT3P36062 692 aa12.61□□□□□ -0.39
YDR034C-CYDR034C-C PRI1P10363 409 aa12.52□□□□□ -0.41
YDR034C-CYDR034C-C RPG1P38249 964 aaKnown RBP12.43□□□□□ -0.42
YDR034C-CYDR034C-C AAD16Q02895 342 aa12.38□□□□□ -0.43
YDR034C-CYDR034C-C RSE1Q04693 1361 aaKnown RBP12.34□□□□□ -0.43
YDR034C-CYDR034C-C PRY3P47033 881 aa12.26□□□□□ -0.45
YDR034C-CYDR034C-C RPL17AP05740 184 aaKnown RBP11.89□□□□□ -0.51
YDR034C-CYDR034C-C RPL17BP46990 184 aaKnown RBP11.89□□□□□ -0.51
YDR034C-CYDR034C-C TSR3Q12094 313 aaKnown RBP11.89□□□□□ -0.51
YDR034C-CYDR034C-C REB1P21538 810 aa11.84□□□□□ -0.51
YDR034C-CYDR034C-C TFA1P36100 482 aa11.8□□□□□ -0.52
YDR034C-CYDR034C-C HAA1Q12753 694 aaKnown RBP11.52□□□□□ -0.57
YDR034C-CYDR034C-C MRPL32P25348 183 aa11.48□□□□□ -0.57
YDR034C-CYDR034C-C YCK3P39962 524 aa11.39□□□□□ -0.59
YDR034C-CYDR034C-C SPT21P35209 758 aa11.35□□□□□ -0.59
YDR034C-CYDR034C-C RIM101P33400 625 aa11.12□□□□□ -0.63
YDR034C-CYDR034C-C YKR023WP36119 530 aaKnown RBP11.07□□□□□ -0.64
YDR034C-CYDR034C-C CDC27P38042 758 aa10.93□□□□□ -0.66
YDR034C-CYDR034C-C HOP09932 586 aa10.89□□□□□ -0.67
YDR034C-CYDR034C-C TFC8Q12308 588 aa10.87□□□□□ -0.67
YDR034C-CYDR034C-C DCD1P06773 312 aa10.81□□□□□ -0.68
YDR034C-CYDR034C-C YGL015CP33199 130 aa10.79□□□□□ -0.68
YDR034C-CYDR034C-C OXP1P28273 1286 aa10.75□□□□□ -0.69
YDR034C-CYDR034C-C YIL055CP40523 627 aaKnown RBP10.74□□□□□ -0.69
YDR034C-CYDR034C-C PTP3P40048 928 aa10.7□□□□□ -0.7
YDR034C-CYDR034C-C YAH1Q12184 172 aaKnown RBP10.64□□□□□ -0.71
YDR034C-CYDR034C-C UBP10P53874 792 aaPredicted RBP10.59□□□□□ -0.71
YDR034C-CYDR034C-C BCH2P36122 765 aa10.55□□□□□ -0.72
YDR034C-CYDR034C-C MAP2P38174 421 aaKnown RBP10.55□□□□□ -0.72
YDR034C-CYDR034C-C SSP1P38871 571 aa10.52□□□□□ -0.73
YDR034C-CYDR034C-C RSM7P47150 247 aa10.5□□□□□ -0.73
YDR034C-CYDR034C-C SCY1P53009 804 aa10.49□□□□□ -0.73
YDR034C-CYDR034C-C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.45□□□□□ -0.74not detected
YDR034C-CYDR034C-C YLR271WQ06152 274 aa10.41□□□□□ -0.74
YDR034C-CYDR034C-C BBC1P47068 1157 aa10.38□□□□□ -0.75
YDR034C-CYDR034C-C AI2P03876 854 aa10.35□□□□□ -0.75
YDR034C-CYDR034C-C EPS1P40557 701 aa10.35□□□□□ -0.75
YDR034C-CYDR034C-C SLX5P32828 619 aaKnown RBP10.33□□□□□ -0.76
YDR034C-CYDR034C-C BDF1P35817 686 aa10.28□□□□□ -0.76
YDR034C-CYDR034C-C TIF4632P39936 914 aaKnown RBP10.23□□□□□ -0.77
YDR034C-CYDR034C-C MGA2P40578 1113 aa10.19□□□□□ -0.78
YDR034C-CYDR034C-C PSD2P53037 1138 aaKnown RBP10.18□□□□□ -0.78
YDR034C-CYDR034C-C CST9Q06032 482 aa10.09□□□□□ -0.79
YDR034C-CYDR034C-C TGL3P40308 642 aa10.08□□□□□ -0.8
YDR034C-CYDR034C-C MRM1P25270 412 aa10.03□□□□□ -0.8
YDR034C-CYDR034C-C RTG3P38165 486 aa9.88□□□□□ -0.83
YDR034C-CYDR034C-C NSR1P27476 414 aaKnown RBP RIP-Chip data9.83□□□□□ -0.84not detected
YDR034C-CYDR034C-C YAP5P40574 245 aa9.83□□□□□ -0.84
YDR034C-CYDR034C-C YOR238WQ08634 303 aa9.8□□□□□ -0.84
YDR034C-CYDR034C-C RCR1P38212 213 aa9.77□□□□□ -0.85
YDR034C-CYDR034C-C RQC2Q12532 1038 aaKnown RBP9.77□□□□□ -0.85
YDR034C-CYDR034C-C YMR1P47147 688 aaKnown RBP RIP-Chip data9.74□□□□□ -0.85not detected
YDR034C-CYDR034C-C VPS29P38759 282 aa9.72□□□□□ -0.85
YDR034C-CYDR034C-C MST1P07236 462 aa9.68□□□□□ -0.86
YDR034C-CYDR034C-C PIB1Q06651 286 aa9.68□□□□□ -0.86
YDR034C-CYDR034C-C DBP1P24784 617 aaKnown RBP9.67□□□□□ -0.86
YDR034C-CYDR034C-C RAM2P29703 316 aa9.65□□□□□ -0.86
YDR034C-CYDR034C-C GTT3P39996 337 aa9.65□□□□□ -0.86
YDR034C-CYDR034C-C UBP9P39967 754 aa9.64□□□□□ -0.87
YDR034C-CYDR034C-C YFR006WP43590 535 aa9.64□□□□□ -0.87
YDR034C-CYDR034C-C STS1P38637 319 aa9.62□□□□□ -0.87
YDR034C-CYDR034C-C DMA1P38823 416 aa9.61□□□□□ -0.87
YDR034C-CYDR034C-C MAK11P20484 414 aaKnown RBP9.59□□□□□ -0.87
YDR034C-CYDR034C-C BUD31P25337 157 aaPredicted RBP9.53□□□□□ -0.88
YDR034C-CYDR034C-C VMA1P17255 1071 aaKnown RBP9.5□□□□□ -0.89
YDR034C-CYDR034C-C MIF2P35201 549 aa9.5□□□□□ -0.89
YDR034C-CYDR034C-C WSC3Q12215 556 aa9.5□□□□□ -0.89
YDR034C-CYDR034C-C YBL029C-AQ3E756 94 aa9.49□□□□□ -0.89
YDR034C-CYDR034C-C COQ8P27697 501 aa9.45□□□□□ -0.9
YDR034C-CYDR034C-C SET1P38827 1080 aaKnown RBP9.42□□□□□ -0.9
YDR034C-CYDR034C-C VNX1P42839 908 aa9.4□□□□□ -0.9
YDR034C-CYDR034C-C SET4P42948 560 aa9.38□□□□□ -0.91
YDR034C-CYDR034C-C YOL036WQ08206 761 aa9.38□□□□□ -0.91
YDR034C-CYDR034C-C SAM3Q08986 587 aa9.38□□□□□ -0.91
YDR034C-CYDR034C-C MSB4Q12317 492 aa9.38□□□□□ -0.91
YDR034C-CYDR034C-C SPP1Q03012 353 aa9.37□□□□□ -0.91
YDR034C-CYDR034C-C EDS1P38073 919 aa9.36□□□□□ -0.91
YDR034C-CYDR034C-C PTC3P34221 468 aaKnown RBP9.34□□□□□ -0.91
YDR034C-CYDR034C-C GYP5Q12344 894 aa9.34□□□□□ -0.91
YDR034C-CYDR034C-C GRE2Q12068 342 aaKnown RBP9.33□□□□□ -0.92
YDR034C-CYDR034C-C NOP53Q12080 455 aaKnown RBP9.33□□□□□ -0.92
YDR034C-CYDR034C-C EAP1P36041 632 aaKnown RBP9.32□□□□□ -0.92
YDR034C-CYDR034C-C TIF11P38912 153 aaKnown RBP9.32□□□□□ -0.92
YDR034C-CYDR034C-C ABP1P15891 592 aaKnown RBP9.31□□□□□ -0.92
YDR034C-CYDR034C-C ATH1P48016 1211 aa9.31□□□□□ -0.92
YDR034C-CYDR034C-C IFH1P39520 1085 aa9.3□□□□□ -0.92
YDR034C-CYDR034C-C ULI1P43604 169 aa9.28□□□□□ -0.92
YDR034C-CYDR034C-C HTA1P04911 132 aaKnown RBP9.26□□□□□ -0.93
YDR034C-CYDR034C-C HTA2P04912 132 aa9.26□□□□□ -0.93
YDR034C-CYDR034C-C GUT1P32190 709 aa9.26□□□□□ -0.93
YDR034C-CYDR034C-C DCW1P36091 449 aa9.26□□□□□ -0.93
YDR034C-CYDR034C-C TRP5P00931 707 aaKnown RBP9.22□□□□□ -0.93
YDR034C-CYDR034C-C SIS1P25294 352 aaKnown RBP9.22□□□□□ -0.93
YDR034C-CYDR034C-C LDB19Q12502 818 aa9.18□□□□□ -0.94
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms