RNA–Protein interactions for RNA: YBR012W-A

YBR012W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YBR012W-A, Length 1,323 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YBR012W-AYBR012W-A DCW1P36091 449 aa6.72□□□□□ -1.33
YBR012W-AYBR012W-A PTC3P34221 468 aaKnown RBP6.71□□□□□ -1.34
YBR012W-AYBR012W-A JIP4Q03361 876 aa6.71□□□□□ -1.34
YBR012W-AYBR012W-A TFG1P41895 735 aaPredicted RBP6.7□□□□□ -1.34
YBR012W-AYBR012W-A ATH1P48016 1211 aa6.7□□□□□ -1.34
YBR012W-AYBR012W-A EDS1P38073 919 aa6.69□□□□□ -1.34
YBR012W-AYBR012W-A NOP53Q12080 455 aaKnown RBP6.69□□□□□ -1.34
YBR012W-AYBR012W-A GUT1P32190 709 aa6.68□□□□□ -1.34
YBR012W-AYBR012W-A PTC4P38089 393 aa6.67□□□□□ -1.34
YBR012W-AYBR012W-A YEL023CP39992 682 aa6.67□□□□□ -1.34
YBR012W-AYBR012W-A RGA2Q06407 1009 aa6.67□□□□□ -1.34
YBR012W-AYBR012W-A DAN4P47179 1161 aa6.64□□□□□ -1.35
YBR012W-AYBR012W-A CHL1P22516 861 aaPredicted RBP6.63□□□□□ -1.35
YBR012W-AYBR012W-A SAP30P38429 201 aa6.61□□□□□ -1.35
YBR012W-AYBR012W-A SET1P38827 1080 aaKnown RBP6.59□□□□□ -1.35
YBR012W-AYBR012W-A YDL129WQ07555 291 aa6.58□□□□□ -1.36
YBR012W-AYBR012W-A PRE3P38624 215 aa6.57□□□□□ -1.36
YBR012W-AYBR012W-A AI4P03878 556 aa6.52□□□□□ -1.37
YBR012W-AYBR012W-A XDJ1P39102 459 aa6.52□□□□□ -1.37
YBR012W-AYBR012W-A PML39Q03760 334 aa6.52□□□□□ -1.37
YBR012W-AYBR012W-A MPH3P0CE00 602 aa6.51□□□□□ -1.37
YBR012W-AYBR012W-A SOL3P38858 249 aa6.51□□□□□ -1.37
YBR012W-AYBR012W-A IFH1P39520 1085 aa6.51□□□□□ -1.37
YBR012W-AYBR012W-A YGR273CP53329 174 aa6.51□□□□□ -1.37
YBR012W-AYBR012W-A NST1P53935 1240 aa6.5□□□□□ -1.37
YBR012W-AYBR012W-A VRP1P37370 817 aa6.45□□□□□ -1.38
YBR012W-AYBR012W-A PEX29Q03370 554 aa6.45□□□□□ -1.38
YBR012W-AYBR012W-A DPS1P04802 557 aaKnown RBP6.44□□□□□ -1.38
YBR012W-AYBR012W-A MID1P41821 548 aa6.44□□□□□ -1.38
YBR012W-AYBR012W-A RGA1P39083 1007 aa6.43□□□□□ -1.38
YBR012W-AYBR012W-A ELP4Q02884 456 aaKnown RBP6.42□□□□□ -1.38
YBR012W-AYBR012W-A ILV3P39522 585 aaKnown RBP6.41□□□□□ -1.38
YBR012W-AYBR012W-A KEX1P09620 729 aa6.4□□□□□ -1.39
YBR012W-AYBR012W-A ARH1P48360 493 aa6.4□□□□□ -1.39
YBR012W-AYBR012W-A YPR148CQ06523 435 aa6.39□□□□□ -1.39
YBR012W-AYBR012W-A SLI15P38283 698 aa6.38□□□□□ -1.39
YBR012W-AYBR012W-A VHR2P40041 505 aa6.38□□□□□ -1.39
YBR012W-AYBR012W-A UBP14P38237 781 aaKnown RBP6.37□□□□□ -1.39
YBR012W-AYBR012W-A DMA1P38823 416 aa6.37□□□□□ -1.39
YBR012W-AYBR012W-A YLR326WQ06170 240 aaKnown RBP6.36□□□□□ -1.39
YBR012W-AYBR012W-A VPS70P47161 811 aa6.35□□□□□ -1.39
YBR012W-AYBR012W-A HAP5Q02516 242 aa6.35□□□□□ -1.39
YBR012W-AYBR012W-A MPC54Q08550 464 aa6.35□□□□□ -1.39
YBR012W-AYBR012W-A RAD54P32863 898 aa6.34□□□□□ -1.39
YBR012W-AYBR012W-A SPT23P35210 1082 aa6.34□□□□□ -1.39
YBR012W-AYBR012W-A REF2P42073 533 aaPredicted RBP6.34□□□□□ -1.39
YBR012W-AYBR012W-A RPP1BP10622 106 aaKnown RBP6.33□□□□□ -1.4
YBR012W-AYBR012W-A KIC1P38692 1080 aa6.33□□□□□ -1.4
YBR012W-AYBR012W-A YDR344CQ05510 147 aa6.33□□□□□ -1.4
YBR012W-AYBR012W-A DPL1Q05567 589 aa6.33□□□□□ -1.4
YBR012W-AYBR012W-A NMA111P53920 997 aa6.32□□□□□ -1.4
YBR012W-AYBR012W-A PCS60P38137 543 aaKnown RBP RIP-Chip data6.31□□□□□ -1.4not detected
YBR012W-AYBR012W-A SRC1Q03707 834 aa6.31□□□□□ -1.4
YBR012W-AYBR012W-A BNI4P53858 892 aa6.3□□□□□ -1.4
YBR012W-AYBR012W-A CKB1P43639 278 aa6.29□□□□□ -1.4
YBR012W-AYBR012W-A PTC2P39966 464 aaKnown RBP6.28□□□□□ -1.4
YBR012W-AYBR012W-A ISU2Q12056 156 aa6.28□□□□□ -1.4
YBR012W-AYBR012W-A MAK21Q12176 1025 aaKnown RBP6.28□□□□□ -1.4
YBR012W-AYBR012W-A YDR090CQ03193 310 aa6.27□□□□□ -1.41
YBR012W-AYBR012W-A RQC2Q12532 1038 aaKnown RBP6.27□□□□□ -1.41
YBR012W-AYBR012W-A CDC73Q06697 393 aa6.26□□□□□ -1.41
YBR012W-AYBR012W-A COX6P00427 148 aa6.25□□□□□ -1.41
YBR012W-AYBR012W-A YML082WQ04533 649 aaKnown RBP6.25□□□□□ -1.41
YBR012W-AYBR012W-A SAS10Q12136 610 aaPredicted RBP6.24□□□□□ -1.41
YBR012W-AYBR012W-A PEX21P50091 288 aa6.22□□□□□ -1.41
YBR012W-AYBR012W-A PBS2P08018 668 aa6.2□□□□□ -1.42
YBR012W-AYBR012W-A CSC1Q06538 782 aa6.2□□□□□ -1.42
YBR012W-AYBR012W-A TFB4Q12004 338 aa6.18□□□□□ -1.42
YBR012W-AYBR012W-A GAP1P19145 602 aaPredicted RBP6.15□□□□□ -1.43
YBR012W-AYBR012W-A ORC6P38826 435 aa6.15□□□□□ -1.43
YBR012W-AYBR012W-A RAM1P22007 431 aa6.14□□□□□ -1.43
YBR012W-AYBR012W-A YRR1Q12172 810 aa6.14□□□□□ -1.43
YBR012W-AYBR012W-A PDR1P12383 1068 aa6.13□□□□□ -1.43
YBR012W-AYBR012W-A SPB4P25808 606 aaPredicted RBP6.13□□□□□ -1.43
YBR012W-AYBR012W-A TUM1Q08686 304 aaKnown RBP6.13□□□□□ -1.43
YBR012W-AYBR012W-A MAM3Q12296 706 aa6.13□□□□□ -1.43
YBR012W-AYBR012W-A GYP1Q08484 637 aa6.12□□□□□ -1.43
YBR012W-AYBR012W-A DSF2P38213 736 aa6.11□□□□□ -1.43
YBR012W-AYBR012W-A YPR015CQ12531 247 aa6.11□□□□□ -1.43
YBR012W-AYBR012W-A MVP1P40959 511 aaKnown RBP6.1□□□□□ -1.43
YBR012W-AYBR012W-A SAS4Q04003 481 aa6.1□□□□□ -1.43
YBR012W-AYBR012W-A NPL4P33755 580 aa6.09□□□□□ -1.43
YBR012W-AYBR012W-A RGR1P19263 1082 aa6.08□□□□□ -1.44
YBR012W-AYBR012W-A PSE1P32337 1089 aaKnown RBP6.07□□□□□ -1.44
YBR012W-AYBR012W-A NUD1P32336 851 aa6.06□□□□□ -1.44
YBR012W-AYBR012W-A YPR109WQ06104 294 aa6.06□□□□□ -1.44
YBR012W-AYBR012W-A IES2P40154 320 aa6.05□□□□□ -1.44
YBR012W-AYBR012W-A PRT1P06103 763 aaKnown RBP6.04□□□□□ -1.44
YBR012W-AYBR012W-A CLB5P30283 435 aa6.03□□□□□ -1.44
YBR012W-AYBR012W-A MRF1P30775 413 aaPredicted RBP6.03□□□□□ -1.44
YBR012W-AYBR012W-A BUD20Q08004 166 aaPredicted RBP6.03□□□□□ -1.44
YBR012W-AYBR012W-A STR2P47164 639 aa6.02□□□□□ -1.45
YBR012W-AYBR012W-A ISM1P48526 1002 aa6.02□□□□□ -1.45
YBR012W-AYBR012W-A GCD11P32481 527 aaKnown RBP6□□□□□ -1.45
YBR012W-AYBR012W-A NUP42P49686 430 aaKnown RBP6□□□□□ -1.45
YBR012W-AYBR012W-A RAS1P01119 309 aa5.99□□□□□ -1.45
YBR012W-AYBR012W-A YEL077CQ3E7X8 1277 aa5.99□□□□□ -1.45
YBR012W-AYBR012W-A AMS1P22855 1083 aa5.98□□□□□ -1.45
YBR012W-AYBR012W-A TEA1P47988 759 aa5.98□□□□□ -1.45
YBR012W-AYBR012W-A ERG12P07277 443 aa5.97□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 43.8 ms