RNA–Protein interactions for RNA: ENST00000641696.1

CASC19-250, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 886 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-250ENST00000641696 TRHP20396 242 aaPredicted RBP12.5□□□□□ -0.41
CASC19-250ENST00000641696 POLA1P09884 1462 aaPredicted RBP12.5□□□□□ -0.41
CASC19-250ENST00000641696 WDR97A6NE52 1622 aa12.47□□□□□ -0.41
CASC19-250ENST00000641696 CAPN15O75808 1086 aa12.46□□□□□ -0.41
CASC19-250ENST00000641696 TARBP1Q13395 1621 aaKnown RBP12.44□□□□□ -0.42
CASC19-250ENST00000641696 CUX2O14529 1486 aa12.43□□□□□ -0.42
CASC19-250ENST00000641696 SOGA1O94964 1423 aa12.43□□□□□ -0.42
CASC19-250ENST00000641696 ABCA10Q8WWZ4 1543 aa12.42□□□□□ -0.42
CASC19-250ENST00000641696 IFT140Q96RY7 1462 aa12.41□□□□□ -0.42
CASC19-250ENST00000641696 RAD54L2Q9Y4B4 1467 aa12.41□□□□□ -0.42
CASC19-250ENST00000641696 EEA1Q15075 1411 aa12.39□□□□□ -0.43
CASC19-250ENST00000641696 KIF27Q86VH2 1401 aa12.37□□□□□ -0.43
CASC19-250ENST00000641696 ABCA5Q8WWZ7 1642 aa12.37□□□□□ -0.43
CASC19-250ENST00000641696 RUSC2Q8N2Y8 1516 aa12.36□□□□□ -0.43
CASC19-250ENST00000641696 POLA2Q14181 598 aa12.35□□□□□ -0.43
CASC19-250ENST00000641696 PBRM1Q86U86 1689 aa12.32□□□□□ -0.44
CASC19-250ENST00000641696 EIF4G3O43432 1585 aaKnown RBP12.31□□□□□ -0.44
CASC19-250ENST00000641696 MKRN4PQ13434 485 aaPredicted RBP12.31□□□□□ -0.44
CASC19-250ENST00000641696 GAPVD1Q14C86 1478 aa12.31□□□□□ -0.44
CASC19-250ENST00000641696 ZNF608Q9ULD9 1512 aaPredicted RBP12.31□□□□□ -0.44
CASC19-250ENST00000641696 ERICH3Q5RHP9 1530 aa12.29□□□□□ -0.44
CASC19-250ENST00000641696 TDRD9Q8NDG6 1382 aaKnown RBP12.29□□□□□ -0.44
CASC19-250ENST00000641696 ABCB7O75027 752 aa12.28□□□□□ -0.44
CASC19-250ENST00000641696 FBLN2P98095 1184 aa12.28□□□□□ -0.44
CASC19-250ENST00000641696 CUL7Q14999 1698 aa12.27□□□□□ -0.45
CASC19-250ENST00000641696 FAM9AQ8IZU1 332 aaPredicted RBP12.27□□□□□ -0.45
CASC19-250ENST00000641696 AQRO60306 1485 aaKnown RBP eCLIP12.27□□□□□ -0.45
CASC19-250ENST00000641696 KIF21BO75037 1637 aa12.26□□□□□ -0.45
CASC19-250ENST00000641696 IGF1RP08069 1367 aa12.26□□□□□ -0.45
CASC19-250ENST00000641696 GRIN2BQ13224 1484 aa12.26□□□□□ -0.45
CASC19-250ENST00000641696 PRXQ9BXM0 1461 aa12.24□□□□□ -0.45
CASC19-250ENST00000641696 ADAMTS12P58397 1594 aa12.22□□□□□ -0.45
CASC19-250ENST00000641696 SPDYE4A6NLX3 237 aa12.21□□□□□ -0.45
CASC19-250ENST00000641696 MAGI1Q96QZ7 1491 aaPredicted RBP12.21□□□□□ -0.46
CASC19-250ENST00000641696 CARMIL1Q5VZK9 1371 aa12.19□□□□□ -0.46
CASC19-250ENST00000641696 GOLGA3Q08378 1498 aa12.19□□□□□ -0.46
CASC19-250ENST00000641696 SNAPC4Q5SXM2 1469 aa12.19□□□□□ -0.46
CASC19-250ENST00000641696 RAPGEF2Q9Y4G8 1499 aa12.18□□□□□ -0.46
CASC19-250ENST00000641696 FHAD1B1AJZ9 1412 aa12.18□□□□□ -0.46
CASC19-250ENST00000641696 SYNJ2O15056 1496 aa12.14□□□□□ -0.47
CASC19-250ENST00000641696 DSG3P32926 999 aa12.13□□□□□ -0.47
CASC19-250ENST00000641696 ZBTB12Q9Y330 459 aaPredicted RBP12.13□□□□□ -0.47
CASC19-250ENST00000641696 RTN4Q9NQC3 1192 aaKnown RBP12.12□□□□□ -0.47
CASC19-250ENST00000641696 CTTNBP2Q8WZ74 1663 aa12.12□□□□□ -0.47
CASC19-250ENST00000641696 GRIN2AQ12879 1464 aa12.11□□□□□ -0.47
CASC19-250ENST00000641696 LOC105371045A0A1W2PR82 267 aa12.11□□□□□ -0.47
CASC19-250ENST00000641696 AMER1Q5JTC6 1135 aaPredicted RBP12.11□□□□□ -0.47
CASC19-250ENST00000641696 CHD1O14646 1710 aa12.11□□□□□ -0.47
CASC19-250ENST00000641696 TNIKQ9UKE5 1360 aa12.09□□□□□ -0.47
CASC19-250ENST00000641696 UBTFP17480 764 aaKnown RBP12.06□□□□□ -0.48
CASC19-250ENST00000641696 CHMP7Q8WUX9 453 aaPredicted RBP12.05□□□□□ -0.48
CASC19-250ENST00000641696 CEP170Q5SW79 1584 aa12.05□□□□□ -0.48
CASC19-250ENST00000641696 NUP160Q12769 1436 aa12.04□□□□□ -0.48
CASC19-250ENST00000641696 PROM2Q8N271 834 aa12.03□□□□□ -0.48
CASC19-250ENST00000641696 FBXO3Q9UK99 471 aa12.01□□□□□ -0.49
CASC19-250ENST00000641696 KIAA0586Q9BVV6 1533 aa12.01□□□□□ -0.49
CASC19-250ENST00000641696 IQGAP2Q13576 1575 aa12.01□□□□□ -0.49
CASC19-250ENST00000641696 CEP162Q5TB80 1403 aa11.99□□□□□ -0.49
CASC19-250ENST00000641696 CLASP1Q7Z460 1538 aa11.96□□□□□ -0.49
CASC19-250ENST00000641696 UGGT2Q9NYU1 1516 aa11.96□□□□□ -0.49
CASC19-250ENST00000641696 SAMD9Q5K651 1589 aa11.96□□□□□ -0.5
CASC19-250ENST00000641696 EFCAB5A4FU69 1503 aa11.96□□□□□ -0.5
CASC19-250ENST00000641696 CLIP1P30622 1438 aa11.95□□□□□ -0.5
CASC19-250ENST00000641696 SHROOM2Q13796 1616 aa11.94□□□□□ -0.5
CASC19-250ENST00000641696 OSCARQ8IYS5 282 aa11.94□□□□□ -0.5
CASC19-250ENST00000641696 ARHGAP35Q9NRY4 1499 aa11.93□□□□□ -0.5
CASC19-250ENST00000641696 KIAA0556O60303 1618 aa11.89□□□□□ -0.51
CASC19-250ENST00000641696 ZNF692Q9BU19 519 aaPredicted RBP11.89□□□□□ -0.51
CASC19-250ENST00000641696 ARAP1Q96P48 1450 aa11.89□□□□□ -0.51
CASC19-250ENST00000641696 DISP1Q96F81 1524 aa11.88□□□□□ -0.51
CASC19-250ENST00000641696 JPH4Q96JJ6 628 aa11.88□□□□□ -0.51
CASC19-250ENST00000641696 RANGAP1P46060 587 aaPredicted RBP11.86□□□□□ -0.51
CASC19-250ENST00000641696 VASPP50552 380 aaPredicted RBP11.86□□□□□ -0.51
CASC19-250ENST00000641696 SPDYE2BA6NHP3 402 aa11.85□□□□□ -0.51
CASC19-250ENST00000641696 SPDYE6P0CI01 402 aa11.85□□□□□ -0.51
CASC19-250ENST00000641696 SPDYE2Q495Y8 402 aa11.85□□□□□ -0.51
CASC19-250ENST00000641696 CARMIL2Q6F5E8 1435 aa11.85□□□□□ -0.51
CASC19-250ENST00000641696 FHOD3Q2V2M9 1422 aa11.84□□□□□ -0.51
CASC19-250ENST00000641696 PRG4Q92954 1404 aaPredicted RBP11.84□□□□□ -0.51
CASC19-250ENST00000641696 VPS8Q8N3P4 1428 aa11.83□□□□□ -0.52
CASC19-250ENST00000641696 ERCC6L2Q5T890 1561 aa11.81□□□□□ -0.52
CASC19-250ENST00000641696 FMN1Q68DA7 1419 aa11.81□□□□□ -0.52
CASC19-250ENST00000641696 P3H3Q8IVL6 736 aa11.8□□□□□ -0.52
CASC19-250ENST00000641696 SSUH2Q9Y2M2 353 aa11.8□□□□□ -0.52
CASC19-250ENST00000641696 PCF11O94913 1555 aaKnown RBP11.79□□□□□ -0.52
CASC19-250ENST00000641696 CASKIN1Q8WXD9 1431 aa11.77□□□□□ -0.53
CASC19-250ENST00000641696 FYCO1Q9BQS8 1478 aa11.76□□□□□ -0.53
CASC19-250ENST00000641696 RAPGEF6Q8TEU7 1601 aa11.75□□□□□ -0.53
CASC19-250ENST00000641696 ABCA8O94911 1581 aa11.75□□□□□ -0.53
CASC19-250ENST00000641696 LRRIQ1Q96JM4 1722 aa11.74□□□□□ -0.53
CASC19-250ENST00000641696 PTPRGP23470 1445 aa11.74□□□□□ -0.53
CASC19-250ENST00000641696 HECW1Q76N89 1606 aa11.74□□□□□ -0.53
CASC19-250ENST00000641696 ARHGEF11O15085 1522 aa11.73□□□□□ -0.53
CASC19-250ENST00000641696 IFNLR1Q8IU57 520 aaPredicted RBP11.73□□□□□ -0.53
CASC19-250ENST00000641696 CFAP43Q8NDM7 1665 aa11.73□□□□□ -0.53
CASC19-250ENST00000641696 MAP3K1Q13233 1512 aa11.72□□□□□ -0.53
CASC19-250ENST00000641696 RIMBP3CA6NJZ7 1639 aa11.71□□□□□ -0.53
CASC19-250ENST00000641696 RIMBP3BA6NNM3 1639 aa11.71□□□□□ -0.53
CASC19-250ENST00000641696 RIMBP3Q9UFD9 1639 aa11.71□□□□□ -0.53
CASC19-250ENST00000641696 PLB1Q6P1J6 1458 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms