RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 FHAD1B1AJZ9 1412 aa25.59■■□□□ 1.69
PHGDH-211ENST00000641213 GAPVD1Q14C86 1478 aa25.59■■□□□ 1.69
PHGDH-211ENST00000641213 TARBP1Q13395 1621 aaKnown RBP25.58■■□□□ 1.69
PHGDH-211ENST00000641213 PCF11O94913 1555 aaKnown RBP25.57■■□□□ 1.68
PHGDH-211ENST00000641213 CFAP43Q8NDM7 1665 aa25.57■■□□□ 1.68
PHGDH-211ENST00000641213 P3H3Q8IVL6 736 aa25.51■■□□□ 1.67
PHGDH-211ENST00000641213 LRRC9Q6ZRR7 1453 aa25.51■■□□□ 1.67
PHGDH-211ENST00000641213 FHOD3Q2V2M9 1422 aa25.5■■□□□ 1.67
PHGDH-211ENST00000641213 CCNB3Q8WWL7 1395 aa25.5■■□□□ 1.67
PHGDH-211ENST00000641213 PBRM1Q86U86 1689 aa25.47■■□□□ 1.67
PHGDH-211ENST00000641213 FYCO1Q9BQS8 1478 aa25.46■■□□□ 1.67
PHGDH-211ENST00000641213 AQRO60306 1485 aaKnown RBP eCLIP25.44■■□□□ 1.661e-6■■□□□ 14.4
PHGDH-211ENST00000641213 MRC2Q9UBG0 1479 aa25.44■■□□□ 1.66
PHGDH-211ENST00000641213 SAMD9Q5K651 1589 aa25.42■■□□□ 1.66
PHGDH-211ENST00000641213 CASKIN1Q8WXD9 1431 aa25.42■■□□□ 1.66
PHGDH-211ENST00000641213 DHX57Q6P158 1386 aaKnown RBP25.38■■□□□ 1.65
PHGDH-211ENST00000641213 FMN1Q68DA7 1419 aa25.36■■□□□ 1.65
PHGDH-211ENST00000641213 PHLDB1Q86UU1 1377 aa25.35■■□□□ 1.65
PHGDH-211ENST00000641213 CLSPNQ9HAW4 1339 aa25.35■■□□□ 1.65
PHGDH-211ENST00000641213 ATP1B4Q9UN42 357 aaPredicted RBP25.34■■□□□ 1.65
PHGDH-211ENST00000641213 DIEXFQ68CQ4 756 aaKnown RBP25.33■■□□□ 1.65
PHGDH-211ENST00000641213 SNAPC4Q5SXM2 1469 aa25.33■■□□□ 1.65
PHGDH-211ENST00000641213 ZNF316A6NFI3 1004 aaPredicted RBP25.32■■□□□ 1.64
PHGDH-211ENST00000641213 LRRIQ1Q96JM4 1722 aa25.32■■□□□ 1.64
PHGDH-211ENST00000641213 ADAMTS12P58397 1594 aa25.3■■□□□ 1.64
PHGDH-211ENST00000641213 WDR62O43379 1518 aa25.29■■□□□ 1.64
PHGDH-211ENST00000641213 ITGAEP38570 1179 aa25.28■■□□□ 1.64
PHGDH-211ENST00000641213 GRIN2BQ13224 1484 aa25.23■■□□□ 1.63
PHGDH-211ENST00000641213 IFT140Q96RY7 1462 aa25.23■■□□□ 1.63
PHGDH-211ENST00000641213 THOC2Q8NI27 1593 aaKnown RBP25.2■■□□□ 1.63
PHGDH-211ENST00000641213 IQGAP2Q13576 1575 aa25.2■■□□□ 1.62
PHGDH-211ENST00000641213 ZNF608Q9ULD9 1512 aaPredicted RBP25.18■■□□□ 1.62
PHGDH-211ENST00000641213 RAB3GAP2Q9H2M9 1393 aa25.18■■□□□ 1.62
PHGDH-211ENST00000641213 FAM50AQ14320 339 aaKnown RBP25.16■■□□□ 1.62
PHGDH-211ENST00000641213 SETD5Q9C0A6 1442 aa25.14■■□□□ 1.62
PHGDH-211ENST00000641213 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.13■■□□□ 1.61
PHGDH-211ENST00000641213 MTUS2Q5JR59 1369 aa25.12■■□□□ 1.61
PHGDH-211ENST00000641213 EIF4G3O43432 1585 aaKnown RBP25.09■■□□□ 1.61
PHGDH-211ENST00000641213 SUPT6HQ7KZ85 1726 aaKnown RBP25.09■■□□□ 1.61
PHGDH-211ENST00000641213 FGD6Q6ZV73 1430 aa25.09■■□□□ 1.61
PHGDH-211ENST00000641213 ERCC6Q03468 1493 aa25.08■■□□□ 1.61
PHGDH-211ENST00000641213 EHBP1L1Q8N3D4 1523 aa25.06■■□□□ 1.6
PHGDH-211ENST00000641213 MAPKBP1O60336 1514 aa25.06■■□□□ 1.6
PHGDH-211ENST00000641213 HECW1Q76N89 1606 aa25.06■■□□□ 1.6
PHGDH-211ENST00000641213 UGGT2Q9NYU1 1516 aa25.05■■□□□ 1.6
PHGDH-211ENST00000641213 CCDC18Q5T9S5 1454 aa25.04■■□□□ 1.6
PHGDH-211ENST00000641213 NCOA2Q15596 1464 aa25.03■■□□□ 1.6
PHGDH-211ENST00000641213 MAGI3Q5TCQ9 1506 aa25.01■■□□□ 1.59
PHGDH-211ENST00000641213 MYOM3Q5VTT5 1437 aa24.98■■□□□ 1.59
PHGDH-211ENST00000641213 KIAA0586Q9BVV6 1533 aa24.98■■□□□ 1.59
PHGDH-211ENST00000641213 ARHGEF11O15085 1522 aa24.97■■□□□ 1.59
PHGDH-211ENST00000641213 GRIN2AQ12879 1464 aa24.97■■□□□ 1.59
PHGDH-211ENST00000641213 EPRSP07814 1512 aaKnown RBP24.95■■□□□ 1.58
PHGDH-211ENST00000641213 KIAA0556O60303 1618 aa24.94■■□□□ 1.58
PHGDH-211ENST00000641213 PTPN23Q9H3S7 1636 aa24.92■■□□□ 1.58
PHGDH-211ENST00000641213 MAGI1Q96QZ7 1491 aaPredicted RBP24.92■■□□□ 1.58
PHGDH-211ENST00000641213 DISP1Q96F81 1524 aa24.92■■□□□ 1.58
PHGDH-211ENST00000641213 CDK13Q14004 1512 aaKnown RBP24.9■■□□□ 1.58
PHGDH-211ENST00000641213 PTPRKQ15262 1439 aa24.89■■□□□ 1.57
PHGDH-211ENST00000641213 HFM1A2PYH4 1435 aa24.84■■□□□ 1.57
PHGDH-211ENST00000641213 SYNJ2O15056 1496 aa24.84■■□□□ 1.57
PHGDH-211ENST00000641213 MIER1Q8N108 512 aa24.84■■□□□ 1.57
PHGDH-211ENST00000641213 CEP170Q5SW79 1584 aa24.84■■□□□ 1.57
PHGDH-211ENST00000641213 SCAF1Q9H7N4 1312 aaKnown RBP24.82■■□□□ 1.56
PHGDH-211ENST00000641213 TCOF1Q13428 1488 aaKnown RBP24.82■■□□□ 1.56
PHGDH-211ENST00000641213 ACIN1Q9UKV3 1341 aaKnown RBP24.82■■□□□ 1.56
PHGDH-211ENST00000641213 RAPGEF6Q8TEU7 1601 aa24.81■■□□□ 1.56
PHGDH-211ENST00000641213 NEUROD1Q13562 356 aa24.78■■□□□ 1.56
PHGDH-211ENST00000641213 CHMP7Q8WUX9 453 aaPredicted RBP24.77■■□□□ 1.56
PHGDH-211ENST00000641213 SIN3AQ96ST3 1273 aa24.77■■□□□ 1.56
PHGDH-211ENST00000641213 NAIPQ13075 1403 aa24.77■■□□□ 1.56
PHGDH-211ENST00000641213 CENPBP07199 599 aaPredicted RBP24.76■■□□□ 1.55
PHGDH-211ENST00000641213 NUP153P49790 1475 aaKnown RBP24.76■■□□□ 1.55
PHGDH-211ENST00000641213 ARID3CA6NKF2 412 aa24.74■■□□□ 1.55
PHGDH-211ENST00000641213 MIA2Q96PC5 1412 aa24.73■■□□□ 1.55
PHGDH-211ENST00000641213 GCC2Q8IWJ2 1684 aa24.73■■□□□ 1.55
PHGDH-211ENST00000641213 UACAQ9BZF9 1416 aa24.73■■□□□ 1.55
PHGDH-211ENST00000641213 NUP160Q12769 1436 aa24.71■■□□□ 1.55
PHGDH-211ENST00000641213 TIMELESSQ9UNS1 1208 aa24.7■■□□□ 1.54
PHGDH-211ENST00000641213 FBLN2P98095 1184 aa24.68■■□□□ 1.54
PHGDH-211ENST00000641213 AKNAQ7Z591 1439 aa24.64■■□□□ 1.53
PHGDH-211ENST00000641213 CARMIL2Q6F5E8 1435 aa24.61■■□□□ 1.53
PHGDH-211ENST00000641213 PLB1Q6P1J6 1458 aa24.61■■□□□ 1.53
PHGDH-211ENST00000641213 JPH4Q96JJ6 628 aa24.6■■□□□ 1.53
PHGDH-211ENST00000641213 RRP7BPQ9NSQ0 103 aa24.6■■□□□ 1.53
PHGDH-211ENST00000641213 CHIC2Q9UKJ5 165 aa24.6■■□□□ 1.53
PHGDH-211ENST00000641213 CDK11AQ9UQ88 783 aaPredicted RBP24.6■■□□□ 1.53
PHGDH-211ENST00000641213 YTHDC1Q96MU7 727 aaKnown RBP24.59■■□□□ 1.53
PHGDH-211ENST00000641213 KDM6BO15054 1643 aa24.59■■□□□ 1.53
PHGDH-211ENST00000641213 DNMT1P26358 1616 aaKnown RBP24.58■■□□□ 1.53
PHGDH-211ENST00000641213 PPP1R15AO75807 674 aaPredicted RBP24.57■■□□□ 1.52
PHGDH-211ENST00000641213 ADCY10Q96PN6 1610 aa24.56■■□□□ 1.52
PHGDH-211ENST00000641213 TROQ12816 1431 aaPredicted RBP24.55■■□□□ 1.52
PHGDH-211ENST00000641213 ITSN2Q9NZM3 1697 aa24.54■■□□□ 1.52
PHGDH-211ENST00000641213 PRG4Q92954 1404 aaPredicted RBP24.54■■□□□ 1.52
PHGDH-211ENST00000641213 DAPK1P53355 1430 aa24.53■■□□□ 1.52
PHGDH-211ENST00000641213 ABCA8O94911 1581 aa24.51■■□□□ 1.51
PHGDH-211ENST00000641213 KIF14Q15058 1648 aa24.51■■□□□ 1.51
PHGDH-211ENST00000641213 TONSLQ96HA7 1378 aa24.51■■□□□ 1.51
PHGDH-211ENST00000641213 ABCC5O15440 1437 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms