RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 CEP162Q5TB80 1403 aa31.84■■■□□ 2.69
PHGDH-210ENST00000641115 CEP170Q5SW79 1584 aa31.76■■■□□ 2.68
PHGDH-210ENST00000641115 NUP160Q12769 1436 aa31.74■■■□□ 2.67
PHGDH-210ENST00000641115 IQGAP2Q13576 1575 aa31.73■■■□□ 2.67
PHGDH-210ENST00000641115 CLIP1P30622 1438 aa31.72■■■□□ 2.67
PHGDH-210ENST00000641115 KIAA0586Q9BVV6 1533 aa31.7■■■□□ 2.67
PHGDH-210ENST00000641115 RANGAP1P46060 587 aaPredicted RBP31.69■■■□□ 2.66
PHGDH-210ENST00000641115 EFCAB5A4FU69 1503 aa31.6■■■□□ 2.65
PHGDH-210ENST00000641115 ARHGAP35Q9NRY4 1499 aa31.56■■■□□ 2.64
PHGDH-210ENST00000641115 UGGT2Q9NYU1 1516 aa31.55■■■□□ 2.64
PHGDH-210ENST00000641115 SAMD9Q5K651 1589 aa31.54■■■□□ 2.64
PHGDH-210ENST00000641115 CLASP1Q7Z460 1538 aa31.49■■■□□ 2.63
PHGDH-210ENST00000641115 ARAP1Q96P48 1450 aa31.47■■■□□ 2.63
PHGDH-210ENST00000641115 SHROOM2Q13796 1616 aa31.42■■■□□ 2.62
PHGDH-210ENST00000641115 JPH4Q96JJ6 628 aa31.42■■■□□ 2.62
PHGDH-210ENST00000641115 KIAA0556O60303 1618 aa31.42■■■□□ 2.62
PHGDH-210ENST00000641115 P3H3Q8IVL6 736 aa31.38■■■□□ 2.61
PHGDH-210ENST00000641115 OSCARQ8IYS5 282 aa31.38■■■□□ 2.61
PHGDH-210ENST00000641115 DISP1Q96F81 1524 aa31.38■■■□□ 2.61
PHGDH-210ENST00000641115 FHOD3Q2V2M9 1422 aa31.38■■■□□ 2.61
PHGDH-210ENST00000641115 VPS8Q8N3P4 1428 aa31.37■■■□□ 2.61
PHGDH-210ENST00000641115 CARMIL2Q6F5E8 1435 aa31.35■■■□□ 2.61
PHGDH-210ENST00000641115 PRG4Q92954 1404 aaPredicted RBP31.3■■■□□ 2.6
PHGDH-210ENST00000641115 FMN1Q68DA7 1419 aa31.28■■■□□ 2.6
PHGDH-210ENST00000641115 PCF11O94913 1555 aaKnown RBP31.19■■■□□ 2.58
PHGDH-210ENST00000641115 ERCC6L2Q5T890 1561 aa31.16■■■□□ 2.58
PHGDH-210ENST00000641115 FYCO1Q9BQS8 1478 aa31.13■■■□□ 2.57
PHGDH-210ENST00000641115 CASKIN1Q8WXD9 1431 aa31.12■■■□□ 2.57
PHGDH-210ENST00000641115 TTBK1Q5TCY1 1321 aaPredicted RBP31.09■■■□□ 2.57
PHGDH-210ENST00000641115 APLP2Q06481 763 aa31.06■■■□□ 2.56
PHGDH-210ENST00000641115 HECW1Q76N89 1606 aa31.05■■■□□ 2.56
PHGDH-210ENST00000641115 RAPGEF6Q8TEU7 1601 aa31.05■■■□□ 2.56
PHGDH-210ENST00000641115 PTPRGP23470 1445 aa31.05■■■□□ 2.56
PHGDH-210ENST00000641115 ATP1B4Q9UN42 357 aaPredicted RBP31.02■■■□□ 2.56
PHGDH-210ENST00000641115 PLB1Q6P1J6 1458 aa30.98■■■□□ 2.55
PHGDH-210ENST00000641115 CFAP43Q8NDM7 1665 aa30.97■■■□□ 2.55
PHGDH-210ENST00000641115 ABCA8O94911 1581 aa30.97■■■□□ 2.55
PHGDH-210ENST00000641115 LRRIQ1Q96JM4 1722 aa30.97■■■□□ 2.55
PHGDH-210ENST00000641115 MAP3K1Q13233 1512 aa30.96■■■□□ 2.55
PHGDH-210ENST00000641115 TIAM1Q13009 1591 aa30.95■■■□□ 2.55
PHGDH-210ENST00000641115 CCDC18Q5T9S5 1454 aa30.93■■■□□ 2.54
PHGDH-210ENST00000641115 ARHGEF11O15085 1522 aa30.91■■■□□ 2.54
PHGDH-210ENST00000641115 NUP153P49790 1475 aaKnown RBP30.9■■■□□ 2.54
PHGDH-210ENST00000641115 UACAQ9BZF9 1416 aa30.88■■■□□ 2.53
PHGDH-210ENST00000641115 EPRSP07814 1512 aaKnown RBP30.88■■■□□ 2.53
PHGDH-210ENST00000641115 ABCC2Q92887 1545 aa30.83■■■□□ 2.53
PHGDH-210ENST00000641115 PPARGC1BQ86YN6 1023 aaKnown RBP30.83■■■□□ 2.53
PHGDH-210ENST00000641115 RIMBP3CA6NJZ7 1639 aa30.82■■■□□ 2.52
PHGDH-210ENST00000641115 RIMBP3BA6NNM3 1639 aa30.82■■■□□ 2.52
PHGDH-210ENST00000641115 RIMBP3Q9UFD9 1639 aa30.82■■■□□ 2.52
PHGDH-210ENST00000641115 CDK13Q14004 1512 aaKnown RBP30.81■■■□□ 2.52
PHGDH-210ENST00000641115 UHRF1BP1LA0JNW5 1464 aa30.78■■■□□ 2.52
PHGDH-210ENST00000641115 LRRC9Q6ZRR7 1453 aa30.77■■■□□ 2.52
PHGDH-210ENST00000641115 ARID3CA6NKF2 412 aa30.76■■■□□ 2.52
PHGDH-210ENST00000641115 KANK4Q5T7N3 995 aaPredicted RBP30.74■■■□□ 2.51
PHGDH-210ENST00000641115 ADCY10Q96PN6 1610 aa30.73■■■□□ 2.51
PHGDH-210ENST00000641115 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.72■■■□□ 2.51
PHGDH-210ENST00000641115 HNRNPUL2Q1KMD3 747 aaKnown RBP30.72■■■□□ 2.51
PHGDH-210ENST00000641115 ATP10BO94823 1461 aa30.7■■■□□ 2.51
PHGDH-210ENST00000641115 MTUS2Q5JR59 1369 aa30.7■■■□□ 2.51
PHGDH-210ENST00000641115 EHBP1L1Q8N3D4 1523 aa30.7■■■□□ 2.51
PHGDH-210ENST00000641115 CDK11AQ9UQ88 783 aaPredicted RBP30.66■■■□□ 2.5
PHGDH-210ENST00000641115 MAGI3Q5TCQ9 1506 aa30.65■■■□□ 2.5
PHGDH-210ENST00000641115 ZCCHC11Q5TAX3 1644 aaKnown RBP30.65■■■□□ 2.5
PHGDH-210ENST00000641115 KDM5BQ9UGL1 1544 aa30.64■■■□□ 2.5
PHGDH-210ENST00000641115 SUPT6HQ7KZ85 1726 aaKnown RBP30.61■■■□□ 2.49
PHGDH-210ENST00000641115 TROQ12816 1431 aaPredicted RBP30.56■■■□□ 2.48
PHGDH-210ENST00000641115 CYB5RLQ6IPT4 315 aa30.55■■■□□ 2.48
PHGDH-210ENST00000641115 PLEKHD1A6NEE1 506 aa30.54■■■□□ 2.48
PHGDH-210ENST00000641115 DNAJC5Q9H3Z4 198 aa30.5■■■□□ 2.47
PHGDH-210ENST00000641115 NCOA2Q15596 1464 aa30.49■■■□□ 2.47
PHGDH-210ENST00000641115 KIF14Q15058 1648 aa30.49■■■□□ 2.47
PHGDH-210ENST00000641115 NPM1P06748 294 aaKnown RBP eCLIP30.48■■■□□ 2.47
PHGDH-210ENST00000641115 TRIM26Q12899 539 aaPredicted RBP30.47■■■□□ 2.47
PHGDH-210ENST00000641115 PHLDB1Q86UU1 1377 aa30.42■■■□□ 2.46
PHGDH-210ENST00000641115 WDR7Q9Y4E6 1490 aa30.38■■■□□ 2.45
PHGDH-210ENST00000641115 ASXL2Q76L83 1435 aa30.36■■■□□ 2.45
PHGDH-210ENST00000641115 MYOM3Q5VTT5 1437 aa30.35■■■□□ 2.45
PHGDH-210ENST00000641115 ITSN2Q9NZM3 1697 aa30.34■■■□□ 2.45
PHGDH-210ENST00000641115 RRBP1Q9P2E9 1410 aaKnown RBP30.33■■■□□ 2.45
PHGDH-210ENST00000641115 CCNB3Q8WWL7 1395 aa30.32■■■□□ 2.44
PHGDH-210ENST00000641115 MAPKBP1O60336 1514 aa30.31■■■□□ 2.44
PHGDH-210ENST00000641115 ABCC10Q5T3U5 1492 aa30.3■■■□□ 2.44
PHGDH-210ENST00000641115 FGD6Q6ZV73 1430 aa30.28■■■□□ 2.44
PHGDH-210ENST00000641115 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.27■■■□□ 2.446e-6■■■■■ 38.2
PHGDH-210ENST00000641115 CDC42BPAQ5VT25 1732 aa30.27■■■□□ 2.44
PHGDH-210ENST00000641115 KCNH8Q96L42 1107 aa30.27■■■□□ 2.44
PHGDH-210ENST00000641115 TTC37Q6PGP7 1564 aa30.27■■■□□ 2.44
PHGDH-210ENST00000641115 PCGF6Q9BYE7 350 aa30.26■■■□□ 2.44
PHGDH-210ENST00000641115 MYO5CQ9NQX4 1742 aa30.23■■■□□ 2.43
PHGDH-210ENST00000641115 MIA2Q96PC5 1412 aa30.23■■■□□ 2.43
PHGDH-210ENST00000641115 GPATCH8Q9UKJ3 1502 aaKnown RBP30.23■■■□□ 2.43
PHGDH-210ENST00000641115 PTPN23Q9H3S7 1636 aa30.21■■■□□ 2.43
PHGDH-210ENST00000641115 PREX2Q70Z35 1606 aa30.21■■■□□ 2.43
PHGDH-210ENST00000641115 ABCA9Q8IUA7 1624 aa30.19■■■□□ 2.42
PHGDH-210ENST00000641115 CDC42BPBQ9Y5S2 1711 aa30.16■■■□□ 2.42
PHGDH-210ENST00000641115 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.15■■■□□ 2.42
PHGDH-210ENST00000641115 FAM50AQ14320 339 aaKnown RBP30.14■■■□□ 2.42
PHGDH-210ENST00000641115 TCOF1Q13428 1488 aaKnown RBP30.14■■■□□ 2.42
PHGDH-210ENST00000641115 CFDP1Q9UEE9 299 aaPredicted RBP30.14■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms