RNA–Protein interactions for RNA: ENST00000640717.1

SPIN3-243, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-243ENST00000640717 GAPVD1Q14C86 1478 aa19.06■□□□□ 0.64
SPIN3-243ENST00000640717 ERCC6Q03468 1493 aa19■□□□□ 0.63
SPIN3-243ENST00000640717 ZNF608Q9ULD9 1512 aaPredicted RBP18.97■□□□□ 0.63
SPIN3-243ENST00000640717 CCNB3Q8WWL7 1395 aa18.93■□□□□ 0.62
SPIN3-243ENST00000640717 PHLDB1Q86UU1 1377 aa18.91■□□□□ 0.62
SPIN3-243ENST00000640717 MRC2Q9UBG0 1479 aa18.9■□□□□ 0.62
SPIN3-243ENST00000640717 PCF11O94913 1555 aaKnown RBP18.87■□□□□ 0.61
SPIN3-243ENST00000640717 DIEXFQ68CQ4 756 aaKnown RBP18.87■□□□□ 0.61
SPIN3-243ENST00000640717 FHAD1B1AJZ9 1412 aa18.86■□□□□ 0.61
SPIN3-243ENST00000640717 LRRC9Q6ZRR7 1453 aa18.84■□□□□ 0.61
SPIN3-243ENST00000640717 CHMP7Q8WUX9 453 aaPredicted RBP18.83■□□□□ 0.61
SPIN3-243ENST00000640717 ABCA5Q8WWZ7 1642 aa18.83■□□□□ 0.6
SPIN3-243ENST00000640717 MTUS2Q5JR59 1369 aa18.83■□□□□ 0.6
SPIN3-243ENST00000640717 TIAM1Q13009 1591 aa18.82■□□□□ 0.6
SPIN3-243ENST00000640717 TARBP1Q13395 1621 aaKnown RBP18.82■□□□□ 0.6
SPIN3-243ENST00000640717 CUL7Q14999 1698 aa18.8■□□□□ 0.6
SPIN3-243ENST00000640717 NEUROD1Q13562 356 aa18.8■□□□□ 0.6
SPIN3-243ENST00000640717 RRBP1Q9P2E9 1410 aaKnown RBP18.79■□□□□ 0.6
SPIN3-243ENST00000640717 WDR97A6NE52 1622 aa18.79■□□□□ 0.6
SPIN3-243ENST00000640717 DHX57Q6P158 1386 aaKnown RBP18.78■□□□□ 0.6
SPIN3-243ENST00000640717 CHIC2Q9UKJ5 165 aa18.78■□□□□ 0.6
SPIN3-243ENST00000640717 ZNF316A6NFI3 1004 aaPredicted RBP18.76■□□□□ 0.59
SPIN3-243ENST00000640717 RAB3GAP2Q9H2M9 1393 aa18.75■□□□□ 0.59
SPIN3-243ENST00000640717 FMN1Q68DA7 1419 aa18.74■□□□□ 0.59
SPIN3-243ENST00000640717 GRIN2BQ13224 1484 aa18.74■□□□□ 0.59
SPIN3-243ENST00000640717 SNAPC4Q5SXM2 1469 aa18.73■□□□□ 0.59
SPIN3-243ENST00000640717 CASKIN1Q8WXD9 1431 aa18.73■□□□□ 0.59
SPIN3-243ENST00000640717 SIN3AQ96ST3 1273 aa18.73■□□□□ 0.59
SPIN3-243ENST00000640717 CTTNBP2Q8WZ74 1663 aa18.71■□□□□ 0.59
SPIN3-243ENST00000640717 YTHDC1Q96MU7 727 aaKnown RBP18.71■□□□□ 0.59
SPIN3-243ENST00000640717 IFT140Q96RY7 1462 aa18.69■□□□□ 0.58
SPIN3-243ENST00000640717 FYCO1Q9BQS8 1478 aa18.68■□□□□ 0.58
SPIN3-243ENST00000640717 RRP7BPQ9NSQ0 103 aa18.68■□□□□ 0.58
SPIN3-243ENST00000640717 EFCAB5A4FU69 1503 aa18.67■□□□□ 0.58
SPIN3-243ENST00000640717 PBRM1Q86U86 1689 aa18.65■□□□□ 0.58
SPIN3-243ENST00000640717 WDR62O43379 1518 aa18.64■□□□□ 0.57
SPIN3-243ENST00000640717 CDK13Q14004 1512 aaKnown RBP18.62■□□□□ 0.57
SPIN3-243ENST00000640717 ADAMTS12P58397 1594 aa18.62■□□□□ 0.57
SPIN3-243ENST00000640717 HIRIP3Q9BW71 556 aaPredicted RBP18.61■□□□□ 0.57
SPIN3-243ENST00000640717 SETD5Q9C0A6 1442 aa18.61■□□□□ 0.57
SPIN3-243ENST00000640717 IQGAP2Q13576 1575 aa18.6■□□□□ 0.57
SPIN3-243ENST00000640717 ZNF777Q9ULD5 760 aaPredicted RBP18.6■□□□□ 0.57
SPIN3-243ENST00000640717 EIF4G3O43432 1585 aaKnown RBP18.6■□□□□ 0.57
SPIN3-243ENST00000640717 MIER1Q8N108 512 aa18.58■□□□□ 0.57
SPIN3-243ENST00000640717 JPH4Q96JJ6 628 aa18.58■□□□□ 0.57
SPIN3-243ENST00000640717 NCOA2Q15596 1464 aa18.57■□□□□ 0.56
SPIN3-243ENST00000640717 FGD6Q6ZV73 1430 aa18.57■□□□□ 0.56
SPIN3-243ENST00000640717 ZNF644Q9H582 1327 aaPredicted RBP18.57■□□□□ 0.56
SPIN3-243ENST00000640717 MAP3K1Q13233 1512 aa18.57■□□□□ 0.56
SPIN3-243ENST00000640717 SAMD9Q5K651 1589 aa18.56■□□□□ 0.56
SPIN3-243ENST00000640717 GRIN2AQ12879 1464 aa18.56■□□□□ 0.56
SPIN3-243ENST00000640717 PTPRKQ15262 1439 aa18.55■□□□□ 0.56
SPIN3-243ENST00000640717 TRIM52Q96A61 297 aa18.55■□□□□ 0.56
SPIN3-243ENST00000640717 CFAP43Q8NDM7 1665 aa18.55■□□□□ 0.56
SPIN3-243ENST00000640717 MAGI3Q5TCQ9 1506 aa18.54■□□□□ 0.56
SPIN3-243ENST00000640717 LRRIQ1Q96JM4 1722 aa18.51■□□□□ 0.55
SPIN3-243ENST00000640717 THOC2Q8NI27 1593 aaKnown RBP18.51■□□□□ 0.55
SPIN3-243ENST00000640717 FOXD1Q16676 465 aa18.5■□□□□ 0.55
SPIN3-243ENST00000640717 EPRSP07814 1512 aaKnown RBP18.49■□□□□ 0.55
SPIN3-243ENST00000640717 KIAA0586Q9BVV6 1533 aa18.49■□□□□ 0.55
SPIN3-243ENST00000640717 PLB1Q6P1J6 1458 aa18.49■□□□□ 0.55
SPIN3-243ENST00000640717 MYOM3Q5VTT5 1437 aa18.48■□□□□ 0.55
SPIN3-243ENST00000640717 DISP1Q96F81 1524 aa18.47■□□□□ 0.55
SPIN3-243ENST00000640717 PRG4Q92954 1404 aaPredicted RBP18.44■□□□□ 0.54
SPIN3-243ENST00000640717 SYNJ2O15056 1496 aa18.44■□□□□ 0.54
SPIN3-243ENST00000640717 CLSPNQ9HAW4 1339 aa18.43■□□□□ 0.54
SPIN3-243ENST00000640717 MAPKBP1O60336 1514 aa18.43■□□□□ 0.54
SPIN3-243ENST00000640717 CEP170Q5SW79 1584 aa18.43■□□□□ 0.54
SPIN3-243ENST00000640717 CDK11AQ9UQ88 783 aaPredicted RBP18.4■□□□□ 0.54
SPIN3-243ENST00000640717 SCAF1Q9H7N4 1312 aaKnown RBP18.4■□□□□ 0.54
SPIN3-243ENST00000640717 MAGI1Q96QZ7 1491 aaPredicted RBP18.4■□□□□ 0.54
SPIN3-243ENST00000640717 CFDP1Q9UEE9 299 aaPredicted RBP18.39■□□□□ 0.53
SPIN3-243ENST00000640717 NUP153P49790 1475 aaKnown RBP18.39■□□□□ 0.53
SPIN3-243ENST00000640717 UGGT2Q9NYU1 1516 aa18.39■□□□□ 0.53
SPIN3-243ENST00000640717 KIAA0556O60303 1618 aa18.38■□□□□ 0.53
SPIN3-243ENST00000640717 CCDC18Q5T9S5 1454 aa18.38■□□□□ 0.53
SPIN3-243ENST00000640717 HECW1Q76N89 1606 aa18.37■□□□□ 0.53
SPIN3-243ENST00000640717 EHBP1L1Q8N3D4 1523 aa18.37■□□□□ 0.53
SPIN3-243ENST00000640717 SUPT6HQ7KZ85 1726 aaKnown RBP18.36■□□□□ 0.53
SPIN3-243ENST00000640717 NAIPQ13075 1403 aa18.34■□□□□ 0.53
SPIN3-243ENST00000640717 PLEKHD1A6NEE1 506 aa18.34■□□□□ 0.53
SPIN3-243ENST00000640717 KCNH8Q96L42 1107 aa18.34■□□□□ 0.53
SPIN3-243ENST00000640717 CARMIL2Q6F5E8 1435 aa18.34■□□□□ 0.53
SPIN3-243ENST00000640717 PTPN23Q9H3S7 1636 aa18.33■□□□□ 0.52
SPIN3-243ENST00000640717 DDX10Q13206 875 aaKnown RBP18.32■□□□□ 0.52
SPIN3-243ENST00000640717 TONSLQ96HA7 1378 aa18.3■□□□□ 0.52
SPIN3-243ENST00000640717 ACIN1Q9UKV3 1341 aaKnown RBP18.3■□□□□ 0.52
SPIN3-243ENST00000640717 HFM1A2PYH4 1435 aa18.29■□□□□ 0.52
SPIN3-243ENST00000640717 NUP160Q12769 1436 aa18.28■□□□□ 0.52
SPIN3-243ENST00000640717 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.27■□□□□ 0.51
SPIN3-243ENST00000640717 PTPRGP23470 1445 aa18.26■□□□□ 0.51
SPIN3-243ENST00000640717 RAPGEF6Q8TEU7 1601 aa18.26■□□□□ 0.51
SPIN3-243ENST00000640717 PPP1R15AO75807 674 aaPredicted RBP18.25■□□□□ 0.51
SPIN3-243ENST00000640717 CENPBP07199 599 aaPredicted RBP18.25■□□□□ 0.51
SPIN3-243ENST00000640717 HNRNPMP52272 730 aaKnown RBP eCLIP18.25■□□□□ 0.51
SPIN3-243ENST00000640717 MPHOSPH9Q99550 1183 aa18.25■□□□□ 0.51
SPIN3-243ENST00000640717 SLC4A1APQ9BWU0 796 aaKnown RBP18.23■□□□□ 0.51
SPIN3-243ENST00000640717 GTF3C3Q9Y5Q9 886 aa18.23■□□□□ 0.51
SPIN3-243ENST00000640717 KDM6BO15054 1643 aa18.23■□□□□ 0.51
SPIN3-243ENST00000640717 UACAQ9BZF9 1416 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms