RNA–Protein interactions for RNA: ENST00000640717.1

SPIN3-243, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-243ENST00000640717 NISCHQ9Y2I1 1504 aa27.13■■□□□ 1.93
SPIN3-243ENST00000640717 SHROOM4Q9ULL8 1493 aa23.47■■□□□ 1.35
SPIN3-243ENST00000640717 DCAF8L2P0C7V8 631 aa23.45■■□□□ 1.34
SPIN3-243ENST00000640717 CCDC180Q9P1Z9 1646 aa22.96■■□□□ 1.27
SPIN3-243ENST00000640717 SUPT5HO00267 1087 aaKnown RBP22.81■■□□□ 1.24
SPIN3-243ENST00000640717 ZCCHC6Q5VYS8 1495 aaKnown RBP22.79■■□□□ 1.24
SPIN3-243ENST00000640717 ABCC9O60706 1549 aa22.33■■□□□ 1.16
SPIN3-243ENST00000640717 DCAF1Q9Y4B6 1507 aa21.95■■□□□ 1.11
SPIN3-243ENST00000640717 SCRIBQ14160 1630 aa21.94■■□□□ 1.1
SPIN3-243ENST00000640717 CHIC1Q5VXU3 224 aa21.65■■□□□ 1.06
SPIN3-243ENST00000640717 NACADO15069 1562 aa21.49■■□□□ 1.03
SPIN3-243ENST00000640717 PABPN1Q86U42 306 aaKnown RBP eCLIP21.47■■□□□ 1.03
SPIN3-243ENST00000640717 CECR2Q9BXF3 1484 aa21.43■■□□□ 1.02
SPIN3-243ENST00000640717 MYO15BQ96JP2 1530 aa21.43■■□□□ 1.02
SPIN3-243ENST00000640717 RSF1Q96T23 1441 aaPredicted RBP21.42■■□□□ 1.02
SPIN3-243ENST00000640717 RB1CC1Q8TDY2 1594 aa21.32■■□□□ 1
SPIN3-243ENST00000640717 EHMT2Q96KQ7 1210 aa21.29■■□□□ 1
SPIN3-243ENST00000640717 LOC105371045A0A1W2PR82 267 aa21.26■□□□□ 0.99
SPIN3-243ENST00000640717 MROH2BQ7Z745 1585 aa21.21■□□□□ 0.99
SPIN3-243ENST00000640717 FAM9AQ8IZU1 332 aaPredicted RBP21.21■□□□□ 0.99
SPIN3-243ENST00000640717 TRIM41Q8WV44 630 aa21.09■□□□□ 0.97
SPIN3-243ENST00000640717 WIZO95785 1651 aa21.05■□□□□ 0.96
SPIN3-243ENST00000640717 UNC13AQ9UPW8 1703 aa20.91■□□□□ 0.94
SPIN3-243ENST00000640717 BAZ1AQ9NRL2 1556 aaPredicted RBP20.83■□□□□ 0.93
SPIN3-243ENST00000640717 BICRAQ9NZM4 1560 aa20.77■□□□□ 0.92
SPIN3-243ENST00000640717 PCGF6Q9BYE7 350 aa20.76■□□□□ 0.91
SPIN3-243ENST00000640717 SMARCA4P51532 1647 aa20.72■□□□□ 0.91
SPIN3-243ENST00000640717 CCDC88BA6NC98 1476 aa20.64■□□□□ 0.89
SPIN3-243ENST00000640717 PPARGC1BQ86YN6 1023 aaKnown RBP20.56■□□□□ 0.88
SPIN3-243ENST00000640717 ABCC8Q09428 1581 aa20.55■□□□□ 0.88
SPIN3-243ENST00000640717 TOP2AP11388 1531 aaKnown RBP20.54■□□□□ 0.88
SPIN3-243ENST00000640717 SMARCA2P51531 1590 aa20.48■□□□□ 0.87
SPIN3-243ENST00000640717 TTBK1Q5TCY1 1321 aaPredicted RBP20.42■□□□□ 0.86
SPIN3-243ENST00000640717 ATAD2BQ9ULI0 1458 aa20.41■□□□□ 0.86
SPIN3-243ENST00000640717 BAZ1BQ9UIG0 1483 aaKnown RBP20.38■□□□□ 0.85
SPIN3-243ENST00000640717 RANGAP1P46060 587 aaPredicted RBP20.32■□□□□ 0.84
SPIN3-243ENST00000640717 SOGA1O94964 1423 aa20.32■□□□□ 0.84
SPIN3-243ENST00000640717 EIF4G1Q04637 1599 aaKnown RBP20.27■□□□□ 0.84
SPIN3-243ENST00000640717 RUSC2Q8N2Y8 1516 aa20.26■□□□□ 0.83
SPIN3-243ENST00000640717 UBTFP17480 764 aaKnown RBP20.25■□□□□ 0.83
SPIN3-243ENST00000640717 TRIM26Q12899 539 aaPredicted RBP20.18■□□□□ 0.82
SPIN3-243ENST00000640717 WRNQ14191 1432 aaPredicted RBP eCLIP20.17■□□□□ 0.82
SPIN3-243ENST00000640717 HRCP23327 699 aa20.15■□□□□ 0.82
SPIN3-243ENST00000640717 CSRNP3Q8WYN3 585 aa20.15■□□□□ 0.82
SPIN3-243ENST00000640717 PEG3Q9GZU2 1588 aa20.13■□□□□ 0.81
SPIN3-243ENST00000640717 SYNJ1O43426 1573 aa20.02■□□□□ 0.8
SPIN3-243ENST00000640717 NCAPD3P42695 1498 aa19.98■□□□□ 0.79
SPIN3-243ENST00000640717 DNAJC5BQ9UF47 199 aa19.97■□□□□ 0.79
SPIN3-243ENST00000640717 CEP162Q5TB80 1403 aa19.91■□□□□ 0.78
SPIN3-243ENST00000640717 CC2D2AQ9P2K1 1620 aa19.84■□□□□ 0.77
SPIN3-243ENST00000640717 HMGXB3Q12766 1538 aa19.82■□□□□ 0.76
SPIN3-243ENST00000640717 TNIKQ9UKE5 1360 aa19.79■□□□□ 0.76
SPIN3-243ENST00000640717 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.78■□□□□ 0.76
SPIN3-243ENST00000640717 RAPGEF2Q9Y4G8 1499 aa19.77■□□□□ 0.76
SPIN3-243ENST00000640717 GOLGA3Q08378 1498 aa19.77■□□□□ 0.76
SPIN3-243ENST00000640717 EEA1Q15075 1411 aa19.76■□□□□ 0.75
SPIN3-243ENST00000640717 CFTRP13569 1480 aa19.74■□□□□ 0.75
SPIN3-243ENST00000640717 CUX1P39880 1505 aa19.73■□□□□ 0.75
SPIN3-243ENST00000640717 CADPSQ9ULU8 1353 aa19.73■□□□□ 0.75
SPIN3-243ENST00000640717 NESP48681 1621 aa19.72■□□□□ 0.75
SPIN3-243ENST00000640717 CEP164Q9UPV0 1460 aa19.68■□□□□ 0.74
SPIN3-243ENST00000640717 TOP2BQ02880 1626 aa19.67■□□□□ 0.74
SPIN3-243ENST00000640717 CLIP1P30622 1438 aa19.66■□□□□ 0.74
SPIN3-243ENST00000640717 APLP2Q06481 763 aa19.61■□□□□ 0.73
SPIN3-243ENST00000640717 HNRNPUL2Q1KMD3 747 aaKnown RBP19.61■□□□□ 0.73
SPIN3-243ENST00000640717 CCER1Q8TC90 406 aaPredicted RBP19.61■□□□□ 0.73
SPIN3-243ENST00000640717 CUX2O14529 1486 aa19.58■□□□□ 0.72
SPIN3-243ENST00000640717 P3H3Q8IVL6 736 aa19.57■□□□□ 0.72
SPIN3-243ENST00000640717 KIF27Q86VH2 1401 aa19.57■□□□□ 0.72
SPIN3-243ENST00000640717 FANCD2Q9BXW9 1451 aa19.55■□□□□ 0.72
SPIN3-243ENST00000640717 ATP1B4Q9UN42 357 aaPredicted RBP19.52■□□□□ 0.72
SPIN3-243ENST00000640717 FGD5Q6ZNL6 1462 aa19.51■□□□□ 0.71
SPIN3-243ENST00000640717 RAD54L2Q9Y4B4 1467 aa19.51■□□□□ 0.71
SPIN3-243ENST00000640717 BIVM-ERCC5R4GMW8 1640 aa19.5■□□□□ 0.71
SPIN3-243ENST00000640717 KIF21BO75037 1637 aa19.48■□□□□ 0.71
SPIN3-243ENST00000640717 IGF1RP08069 1367 aa19.44■□□□□ 0.7
SPIN3-243ENST00000640717 PRXQ9BXM0 1461 aa19.44■□□□□ 0.7
SPIN3-243ENST00000640717 KANK4Q5T7N3 995 aaPredicted RBP19.42■□□□□ 0.7
SPIN3-243ENST00000640717 TDRD9Q8NDG6 1382 aaKnown RBP19.4■□□□□ 0.7
SPIN3-243ENST00000640717 ITGAEP38570 1179 aa19.4■□□□□ 0.7
SPIN3-243ENST00000640717 VPS8Q8N3P4 1428 aa19.4■□□□□ 0.7
SPIN3-243ENST00000640717 CARMIL1Q5VZK9 1371 aa19.39■□□□□ 0.7
SPIN3-243ENST00000640717 ZEB1P37275 1124 aaPredicted RBP19.36■□□□□ 0.69
SPIN3-243ENST00000640717 ARAP1Q96P48 1450 aa19.33■□□□□ 0.68
SPIN3-243ENST00000640717 TOPBP1Q92547 1522 aa19.31■□□□□ 0.68
SPIN3-243ENST00000640717 POLA1P09884 1462 aaPredicted RBP19.31■□□□□ 0.68
SPIN3-243ENST00000640717 URB2Q14146 1524 aaKnown RBP19.27■□□□□ 0.67
SPIN3-243ENST00000640717 ERICH3Q5RHP9 1530 aa19.24■□□□□ 0.67
SPIN3-243ENST00000640717 ARHGAP35Q9NRY4 1499 aa19.23■□□□□ 0.67
SPIN3-243ENST00000640717 PDS5BQ9NTI5 1447 aa19.22■□□□□ 0.67
SPIN3-243ENST00000640717 ARID3CA6NKF2 412 aa19.22■□□□□ 0.67
SPIN3-243ENST00000640717 PRDM2Q13029 1718 aa19.21■□□□□ 0.67
SPIN3-243ENST00000640717 DNMBPQ6XZF7 1577 aa19.2■□□□□ 0.66
SPIN3-243ENST00000640717 FHOD3Q2V2M9 1422 aa19.15■□□□□ 0.66
SPIN3-243ENST00000640717 LAMC3Q9Y6N6 1575 aa19.13■□□□□ 0.65
SPIN3-243ENST00000640717 AQRO60306 1485 aaKnown RBP eCLIP19.12■□□□□ 0.65
SPIN3-243ENST00000640717 ABCA10Q8WWZ4 1543 aa19.11■□□□□ 0.65
SPIN3-243ENST00000640717 KIF21AQ7Z4S6 1674 aa19.1■□□□□ 0.65
SPIN3-243ENST00000640717 FAM50AQ14320 339 aaKnown RBP19.09■□□□□ 0.65
SPIN3-243ENST00000640717 FBLN2P98095 1184 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms