RNA–Protein interactions for RNA: ENST00000640172.1

PAX6-265, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-265ENST00000640172 ANP32CO43423 234 aa18.57■□□□□ 0.56
PAX6-265ENST00000640172 HNRNPUQ00839 825 aaKnown RBP eCLIP18.51■□□□□ 0.55
PAX6-265ENST00000640172 NBR1Q14596 966 aa18.49■□□□□ 0.55
PAX6-265ENST00000640172 PAK3O75914 559 aaPredicted RBP18.48■□□□□ 0.55
PAX6-265ENST00000640172 B4GALNT3Q6L9W6 998 aa18.44■□□□□ 0.54
PAX6-265ENST00000640172 SETD5Q9C0A6 1442 aa18.43■□□□□ 0.54
PAX6-265ENST00000640172 PRXQ9BXM0 1461 aa18.42■□□□□ 0.54
PAX6-265ENST00000640172 SALL2Q9Y467 1007 aaPredicted RBP18.4■□□□□ 0.54
PAX6-265ENST00000640172 CCDC184Q52MB2 194 aa18.4■□□□□ 0.54
PAX6-265ENST00000640172 PABPN1Q86U42 306 aaKnown RBP eCLIP18.38■□□□□ 0.53
PAX6-265ENST00000640172 FAM50AQ14320 339 aaKnown RBP18.37■□□□□ 0.53
PAX6-265ENST00000640172 ARHGAP35Q9NRY4 1499 aa18.36■□□□□ 0.53
PAX6-265ENST00000640172 PPP4R2Q9NY27 417 aa18.35■□□□□ 0.53
PAX6-265ENST00000640172 PHLDB1Q86UU1 1377 aa18.34■□□□□ 0.53
PAX6-265ENST00000640172 NOP58Q9Y2X3 529 aaKnown RBP18.34■□□□□ 0.53
PAX6-265ENST00000640172 ERICH3Q5RHP9 1530 aa18.33■□□□□ 0.52
PAX6-265ENST00000640172 MYT1LQ9UL68 1186 aa18.32■□□□□ 0.52
PAX6-265ENST00000640172 CCDC136Q96JN2 1154 aa18.31■□□□□ 0.52
PAX6-265ENST00000640172 IL27Q8NEV9 243 aa18.3■□□□□ 0.52
PAX6-265ENST00000640172 UNC13AQ9UPW8 1703 aa18.3■□□□□ 0.52
PAX6-265ENST00000640172 TOP2BQ02880 1626 aa18.29■□□□□ 0.52
PAX6-265ENST00000640172 TIMELESSQ9UNS1 1208 aa18.27■□□□□ 0.52
PAX6-265ENST00000640172 RTN4Q9NQC3 1192 aaKnown RBP18.26■□□□□ 0.51
PAX6-265ENST00000640172 WASHC2AQ641Q2 1341 aa18.22■□□□□ 0.51
PAX6-265ENST00000640172 FAM9BQ8IZU0 186 aa18.21■□□□□ 0.51
PAX6-265ENST00000640172 ERICH6BQ5W0A0 696 aa18.2■□□□□ 0.5
PAX6-265ENST00000640172 TONSLQ96HA7 1378 aa18.2■□□□□ 0.5
PAX6-265ENST00000640172 TIAM1Q13009 1591 aa18.19■□□□□ 0.5
PAX6-265ENST00000640172 PEG3Q9GZU2 1588 aa18.19■□□□□ 0.5
PAX6-265ENST00000640172 LRRC9Q6ZRR7 1453 aa18.18■□□□□ 0.5
PAX6-265ENST00000640172 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.16■□□□□ 0.5
PAX6-265ENST00000640172 SENP3-EIF4A1A0A087X0R7 540 aa18.15■□□□□ 0.5
PAX6-265ENST00000640172 P3H3Q8IVL6 736 aa18.15■□□□□ 0.5
PAX6-265ENST00000640172 ATP1B4Q9UN42 357 aaPredicted RBP18.15■□□□□ 0.5
PAX6-265ENST00000640172 BIVM-ERCC5R4GMW8 1640 aa18.14■□□□□ 0.49
PAX6-265ENST00000640172 ATAD2BQ9ULI0 1458 aa18.14■□□□□ 0.49
PAX6-265ENST00000640172 C11orf95C9JLR9 678 aaPredicted RBP18.13■□□□□ 0.49
PAX6-265ENST00000640172 HSPA5P11021 654 aaKnown RBP18.13■□□□□ 0.49
PAX6-265ENST00000640172 IPO9Q96P70 1041 aaKnown RBP18.13■□□□□ 0.49
PAX6-265ENST00000640172 KIF27Q86VH2 1401 aa18.1■□□□□ 0.49
PAX6-265ENST00000640172 KDM5BQ9UGL1 1544 aa18.09■□□□□ 0.49
PAX6-265ENST00000640172 AKNAQ7Z591 1439 aa18.09■□□□□ 0.49
PAX6-265ENST00000640172 CUX1P39880 1505 aa18.09■□□□□ 0.49
PAX6-265ENST00000640172 PRKRIP1Q9H875 184 aaPredicted RBP18.08■□□□□ 0.48
PAX6-265ENST00000640172 MRS2Q9HD23 443 aa18.07■□□□□ 0.48
PAX6-265ENST00000640172 ZBTB47Q9UFB7 747 aaPredicted RBP18.07■□□□□ 0.48
PAX6-265ENST00000640172 BICRAQ9NZM4 1560 aa18.06■□□□□ 0.48
PAX6-265ENST00000640172 RTL5Q5HYW3 569 aaPredicted RBP18.06■□□□□ 0.48
PAX6-265ENST00000640172 AQRO60306 1485 aaKnown RBP eCLIP18.06■□□□□ 0.48
PAX6-265ENST00000640172 ZBED9Q6R2W3 1325 aa18.06■□□□□ 0.48
PAX6-265ENST00000640172 PTPRKQ15262 1439 aa18.04■□□□□ 0.48
PAX6-265ENST00000640172 ANP32AP39687 249 aaKnown RBP18.04■□□□□ 0.48
PAX6-265ENST00000640172 FHAD1B1AJZ9 1412 aa18.04■□□□□ 0.48
PAX6-265ENST00000640172 MAP3K1Q13233 1512 aa18.04■□□□□ 0.48
PAX6-265ENST00000640172 CNGB1Q14028 1251 aaPredicted RBP18.02■□□□□ 0.48
PAX6-265ENST00000640172 LAS1LQ9Y4W2 734 aaKnown RBP18.01■□□□□ 0.47
PAX6-265ENST00000640172 CCDC18Q5T9S5 1454 aa18■□□□□ 0.47
PAX6-265ENST00000640172 NPM2Q86SE8 214 aaKnown RBP17.99■□□□□ 0.47
PAX6-265ENST00000640172 IGF1RP08069 1367 aa17.99■□□□□ 0.47
PAX6-265ENST00000640172 CNTLNQ9NXG0 1405 aa17.98■□□□□ 0.47
PAX6-265ENST00000640172 UACAQ9BZF9 1416 aa17.96■□□□□ 0.47
PAX6-265ENST00000640172 NCOA2Q15596 1464 aa17.95■□□□□ 0.46
PAX6-265ENST00000640172 EIF4G2P78344 907 aaKnown RBP eCLIP17.95■□□□□ 0.46
PAX6-265ENST00000640172 PCF11O94913 1555 aaKnown RBP17.95■□□□□ 0.46
PAX6-265ENST00000640172 NEFMP07197 916 aa17.94■□□□□ 0.46
PAX6-265ENST00000640172 NCAPD3P42695 1498 aa17.92■□□□□ 0.46
PAX6-265ENST00000640172 BRPF3Q9ULD4 1205 aa17.92■□□□□ 0.46
PAX6-265ENST00000640172 RNF123Q5XPI4 1314 aa17.91■□□□□ 0.46
PAX6-265ENST00000640172 CCDC7Q96M83 1385 aa17.91■□□□□ 0.46
PAX6-265ENST00000640172 HFM1A2PYH4 1435 aa17.9■□□□□ 0.46
PAX6-265ENST00000640172 FHOD3Q2V2M9 1422 aa17.9■□□□□ 0.46
PAX6-265ENST00000640172 FOXD1Q16676 465 aa17.9■□□□□ 0.46
PAX6-265ENST00000640172 NAIPQ13075 1403 aa17.89■□□□□ 0.45
PAX6-265ENST00000640172 CFAP43Q8NDM7 1665 aa17.89■□□□□ 0.45
PAX6-265ENST00000640172 FGD6Q6ZV73 1430 aa17.89■□□□□ 0.45
PAX6-265ENST00000640172 DENND4BO75064 1496 aaPredicted RBP17.88■□□□□ 0.45
PAX6-265ENST00000640172 CARMIL1Q5VZK9 1371 aa17.88■□□□□ 0.45
PAX6-265ENST00000640172 L3MBTL2Q969R5 705 aa17.88■□□□□ 0.45
PAX6-265ENST00000640172 SMG6Q86US8 1419 aaKnown RBP17.88■□□□□ 0.45
PAX6-265ENST00000640172 NUDCQ9Y266 331 aa17.88■□□□□ 0.45
PAX6-265ENST00000640172 PTPN23Q9H3S7 1636 aa17.87■□□□□ 0.45
PAX6-265ENST00000640172 RRP7BPQ9NSQ0 103 aa17.87■□□□□ 0.45
PAX6-265ENST00000640172 NCOA1Q15788 1441 aa17.86■□□□□ 0.45
PAX6-265ENST00000640172 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.86■□□□□ 0.45
PAX6-265ENST00000640172 WASHC2CQ9Y4E1 1318 aa17.85■□□□□ 0.45
PAX6-265ENST00000640172 NBPF8Q3BBV2 869 aa17.85■□□□□ 0.45
PAX6-265ENST00000640172 SKAP1Q86WV1 359 aa17.84■□□□□ 0.45
PAX6-265ENST00000640172 UBE2Q2Q8WVN8 375 aa17.84■□□□□ 0.45
PAX6-265ENST00000640172 CHIC2Q9UKJ5 165 aa17.84■□□□□ 0.45
PAX6-265ENST00000640172 KIF7Q2M1P5 1343 aa17.84■□□□□ 0.45
PAX6-265ENST00000640172 PDE4AP27815 886 aa17.81■□□□□ 0.44
PAX6-265ENST00000640172 EXOC6Q8TAG9 804 aa17.79■□□□□ 0.44
PAX6-265ENST00000640172 EIF5BO60841 1220 aaKnown RBP17.77■□□□□ 0.44
PAX6-265ENST00000640172 BACH2Q9BYV9 841 aa17.76■□□□□ 0.43
PAX6-265ENST00000640172 FMN1Q68DA7 1419 aa17.76■□□□□ 0.43
PAX6-265ENST00000640172 SLC4A3P48751 1232 aa17.75■□□□□ 0.43
PAX6-265ENST00000640172 USP35Q9P2H5 1018 aa17.75■□□□□ 0.43
PAX6-265ENST00000640172 POLR3GLQ9BT43 218 aa17.74■□□□□ 0.43
PAX6-265ENST00000640172 KDM6BO15054 1643 aa17.73■□□□□ 0.43
PAX6-265ENST00000640172 CASKIN1Q8WXD9 1431 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms