RNA–Protein interactions for RNA: ENST00000640172.1

PAX6-265, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-265ENST00000640172 NISCHQ9Y2I1 1504 aa24.87■■□□□ 1.57
PAX6-265ENST00000640172 HRCP23327 699 aa22.57■■□□□ 1.2
PAX6-265ENST00000640172 SHROOM4Q9ULL8 1493 aa22.36■■□□□ 1.17
PAX6-265ENST00000640172 PPARGC1BQ86YN6 1023 aaKnown RBP22.34■■□□□ 1.17
PAX6-265ENST00000640172 SUPT5HO00267 1087 aaKnown RBP22.27■■□□□ 1.16
PAX6-265ENST00000640172 PCGF6Q9BYE7 350 aa22.2■■□□□ 1.14
PAX6-265ENST00000640172 MYO15BQ96JP2 1530 aa22.12■■□□□ 1.13
PAX6-265ENST00000640172 CHIC1Q5VXU3 224 aa21.88■■□□□ 1.09
PAX6-265ENST00000640172 LOC105371045A0A1W2PR82 267 aa21.54■■□□□ 1.04
PAX6-265ENST00000640172 PELP1Q8IZL8 1130 aaKnown RBP21.54■■□□□ 1.04
PAX6-265ENST00000640172 SCAF1Q9H7N4 1312 aaKnown RBP21.5■■□□□ 1.03
PAX6-265ENST00000640172 DCAF1Q9Y4B6 1507 aa21.38■■□□□ 1.01
PAX6-265ENST00000640172 TRIM26Q12899 539 aaPredicted RBP21.3■■□□□ 1
PAX6-265ENST00000640172 ZCCHC6Q5VYS8 1495 aaKnown RBP21.16■□□□□ 0.98
PAX6-265ENST00000640172 CCDC180Q9P1Z9 1646 aa21.11■□□□□ 0.97
PAX6-265ENST00000640172 ZEB1P37275 1124 aaPredicted RBP20.97■□□□□ 0.95
PAX6-265ENST00000640172 DCAF8L2P0C7V8 631 aa20.95■□□□□ 0.94
PAX6-265ENST00000640172 NEUROD1Q13562 356 aa20.89■□□□□ 0.94
PAX6-265ENST00000640172 ACIN1Q9UKV3 1341 aaKnown RBP20.83■□□□□ 0.92
PAX6-265ENST00000640172 GTF3C3Q9Y5Q9 886 aa20.73■□□□□ 0.91
PAX6-265ENST00000640172 EHMT2Q96KQ7 1210 aa20.67■□□□□ 0.9
PAX6-265ENST00000640172 FAM9AQ8IZU1 332 aaPredicted RBP20.64■□□□□ 0.89
PAX6-265ENST00000640172 MYT1Q01538 1121 aa20.58■□□□□ 0.89
PAX6-265ENST00000640172 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.58■□□□□ 0.88
PAX6-265ENST00000640172 TRIM41Q8WV44 630 aa20.47■□□□□ 0.87
PAX6-265ENST00000640172 DIEXFQ68CQ4 756 aaKnown RBP20.46■□□□□ 0.87
PAX6-265ENST00000640172 CCER1Q8TC90 406 aaPredicted RBP20.4■□□□□ 0.86
PAX6-265ENST00000640172 CENPBP07199 599 aaPredicted RBP20.38■□□□□ 0.85
PAX6-265ENST00000640172 YTHDC1Q96MU7 727 aaKnown RBP20.24■□□□□ 0.83
PAX6-265ENST00000640172 TTBK1Q5TCY1 1321 aaPredicted RBP20.16■□□□□ 0.82
PAX6-265ENST00000640172 RSF1Q96T23 1441 aaPredicted RBP20.14■□□□□ 0.81
PAX6-265ENST00000640172 RB1CC1Q8TDY2 1594 aa20.09■□□□□ 0.81
PAX6-265ENST00000640172 ABCC9O60706 1549 aa20.08■□□□□ 0.81
PAX6-265ENST00000640172 MIER1Q8N108 512 aa20.03■□□□□ 0.8
PAX6-265ENST00000640172 ZNF316A6NFI3 1004 aaPredicted RBP20.01■□□□□ 0.79
PAX6-265ENST00000640172 SCRIBQ14160 1630 aa19.75■□□□□ 0.75
PAX6-265ENST00000640172 SUPT16HQ9Y5B9 1047 aaKnown RBP19.7■□□□□ 0.74
PAX6-265ENST00000640172 BCL11AQ9H165 835 aa19.67■□□□□ 0.74
PAX6-265ENST00000640172 TSHZ2Q9NRE2 1034 aa19.65■□□□□ 0.74
PAX6-265ENST00000640172 WRNQ14191 1432 aaPredicted RBP eCLIP19.64■□□□□ 0.74
PAX6-265ENST00000640172 CECR2Q9BXF3 1484 aa19.63■□□□□ 0.73
PAX6-265ENST00000640172 CEP162Q5TB80 1403 aa19.61■□□□□ 0.73
PAX6-265ENST00000640172 HNRNPUL2Q1KMD3 747 aaKnown RBP19.61■□□□□ 0.73
PAX6-265ENST00000640172 ANP32EQ9BTT0 268 aa19.61■□□□□ 0.73
PAX6-265ENST00000640172 MROH2BQ7Z745 1585 aa19.55■□□□□ 0.72
PAX6-265ENST00000640172 CSRNP3Q8WYN3 585 aa19.54■□□□□ 0.72
PAX6-265ENST00000640172 CCDC88BA6NC98 1476 aa19.5■□□□□ 0.71
PAX6-265ENST00000640172 WIZO95785 1651 aa19.49■□□□□ 0.71
PAX6-265ENST00000640172 SOGA1O94964 1423 aa19.46■□□□□ 0.71
PAX6-265ENST00000640172 ABCC8Q09428 1581 aa19.45■□□□□ 0.7
PAX6-265ENST00000640172 UBTFP17480 764 aaKnown RBP19.42■□□□□ 0.7
PAX6-265ENST00000640172 TNIKQ9UKE5 1360 aa19.41■□□□□ 0.7
PAX6-265ENST00000640172 EIF4G1Q04637 1599 aaKnown RBP19.4■□□□□ 0.7
PAX6-265ENST00000640172 RUSC2Q8N2Y8 1516 aa19.39■□□□□ 0.7
PAX6-265ENST00000640172 KCNH8Q96L42 1107 aa19.37■□□□□ 0.69
PAX6-265ENST00000640172 BCANQ96GW7 911 aa19.35■□□□□ 0.69
PAX6-265ENST00000640172 CLSPNQ9HAW4 1339 aa19.29■□□□□ 0.68
PAX6-265ENST00000640172 BAZ1AQ9NRL2 1556 aaPredicted RBP19.18■□□□□ 0.66
PAX6-265ENST00000640172 FKBP8Q14318 412 aa19.16■□□□□ 0.66
PAX6-265ENST00000640172 RBM19Q9Y4C8 960 aaKnown RBP19.16■□□□□ 0.66
PAX6-265ENST00000640172 DHX57Q6P158 1386 aaKnown RBP19.14■□□□□ 0.65
PAX6-265ENST00000640172 RANGAP1P46060 587 aaPredicted RBP19.14■□□□□ 0.65
PAX6-265ENST00000640172 GOLGA3Q08378 1498 aa19.11■□□□□ 0.65
PAX6-265ENST00000640172 MSH5O43196 834 aa19.1■□□□□ 0.65
PAX6-265ENST00000640172 ITGAEP38570 1179 aa19.1■□□□□ 0.65
PAX6-265ENST00000640172 NACADO15069 1562 aa19.09■□□□□ 0.65
PAX6-265ENST00000640172 CLIP1P30622 1438 aa19.08■□□□□ 0.65
PAX6-265ENST00000640172 EEA1Q15075 1411 aa19.02■□□□□ 0.63
PAX6-265ENST00000640172 VPS8Q8N3P4 1428 aa19■□□□□ 0.63
PAX6-265ENST00000640172 APLP2Q06481 763 aa18.99■□□□□ 0.63
PAX6-265ENST00000640172 SMARCA2P51531 1590 aa18.98■□□□□ 0.63
PAX6-265ENST00000640172 TOP2AP11388 1531 aaKnown RBP18.94■□□□□ 0.62
PAX6-265ENST00000640172 KANK4Q5T7N3 995 aaPredicted RBP18.93■□□□□ 0.62
PAX6-265ENST00000640172 TRIM52Q96A61 297 aa18.92■□□□□ 0.62
PAX6-265ENST00000640172 DDX10Q13206 875 aaKnown RBP18.92■□□□□ 0.62
PAX6-265ENST00000640172 CEP164Q9UPV0 1460 aa18.89■□□□□ 0.61
PAX6-265ENST00000640172 RAPGEF2Q9Y4G8 1499 aa18.87■□□□□ 0.61
PAX6-265ENST00000640172 KIF21BO75037 1637 aa18.86■□□□□ 0.61
PAX6-265ENST00000640172 PRKCSHP14314 528 aaPredicted RBP18.85■□□□□ 0.61
PAX6-265ENST00000640172 HIRIP3Q9BW71 556 aaPredicted RBP18.84■□□□□ 0.61
PAX6-265ENST00000640172 NEFLP07196 543 aa18.79■□□□□ 0.6
PAX6-265ENST00000640172 SYNJ1O43426 1573 aa18.77■□□□□ 0.59
PAX6-265ENST00000640172 IRX6P78412 446 aaPredicted RBP18.76■□□□□ 0.59
PAX6-265ENST00000640172 PPP1R15AO75807 674 aaPredicted RBP18.75■□□□□ 0.59
PAX6-265ENST00000640172 SMARCA4P51532 1647 aa18.74■□□□□ 0.59
PAX6-265ENST00000640172 SIN3AQ96ST3 1273 aa18.73■□□□□ 0.59
PAX6-265ENST00000640172 FANCIQ9NVI1 1328 aa18.69■□□□□ 0.58
PAX6-265ENST00000640172 MAPKBP1O60336 1514 aa18.69■□□□□ 0.58
PAX6-265ENST00000640172 WDR97A6NE52 1622 aa18.69■□□□□ 0.58
PAX6-265ENST00000640172 RRBP1Q9P2E9 1410 aaKnown RBP18.67■□□□□ 0.58
PAX6-265ENST00000640172 BAZ1BQ9UIG0 1483 aaKnown RBP18.67■□□□□ 0.58
PAX6-265ENST00000640172 ARAP1Q96P48 1450 aa18.65■□□□□ 0.58
PAX6-265ENST00000640172 RAB3GAP2Q9H2M9 1393 aa18.65■□□□□ 0.58
PAX6-265ENST00000640172 CUX2O14529 1486 aa18.63■□□□□ 0.57
PAX6-265ENST00000640172 DEKP35659 375 aaKnown RBP18.63■□□□□ 0.57
PAX6-265ENST00000640172 ERICH6Q7L0X2 663 aa18.61■□□□□ 0.57
PAX6-265ENST00000640172 CCNB3Q8WWL7 1395 aa18.61■□□□□ 0.57
PAX6-265ENST00000640172 CCER2I3L3R5 266 aa18.58■□□□□ 0.56
PAX6-265ENST00000640172 CDK11AQ9UQ88 783 aaPredicted RBP18.58■□□□□ 0.56
PAX6-265ENST00000640172 ANO8Q9HCE9 1232 aaPredicted RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms