RNA–Protein interactions for RNA: ENST00000640104.1

SPIN3-235, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,776 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-235ENST00000640104 GAPVD1Q14C86 1478 aa19.92■□□□□ 0.78
SPIN3-235ENST00000640104 CTTNBP2Q8WZ74 1663 aa19.92■□□□□ 0.78
SPIN3-235ENST00000640104 FHOD3Q2V2M9 1422 aa19.91■□□□□ 0.78
SPIN3-235ENST00000640104 CCNB3Q8WWL7 1395 aa19.91■□□□□ 0.78
SPIN3-235ENST00000640104 PCF11O94913 1555 aaKnown RBP19.91■□□□□ 0.78
SPIN3-235ENST00000640104 EFCAB5A4FU69 1503 aa19.9■□□□□ 0.78
SPIN3-235ENST00000640104 LRRC9Q6ZRR7 1453 aa19.87■□□□□ 0.77
SPIN3-235ENST00000640104 ATP1B4Q9UN42 357 aaPredicted RBP19.85■□□□□ 0.77
SPIN3-235ENST00000640104 TARBP1Q13395 1621 aaKnown RBP19.85■□□□□ 0.77
SPIN3-235ENST00000640104 CFAP43Q8NDM7 1665 aa19.84■□□□□ 0.77
SPIN3-235ENST00000640104 DIEXFQ68CQ4 756 aaKnown RBP19.83■□□□□ 0.76
SPIN3-235ENST00000640104 ITGAEP38570 1179 aa19.82■□□□□ 0.76
SPIN3-235ENST00000640104 DHX57Q6P158 1386 aaKnown RBP19.82■□□□□ 0.76
SPIN3-235ENST00000640104 FYCO1Q9BQS8 1478 aa19.81■□□□□ 0.76
SPIN3-235ENST00000640104 CASKIN1Q8WXD9 1431 aa19.79■□□□□ 0.76
SPIN3-235ENST00000640104 MRC2Q9UBG0 1479 aa19.79■□□□□ 0.76
SPIN3-235ENST00000640104 PHLDB1Q86UU1 1377 aa19.79■□□□□ 0.76
SPIN3-235ENST00000640104 ZNF316A6NFI3 1004 aaPredicted RBP19.78■□□□□ 0.76
SPIN3-235ENST00000640104 AQRO60306 1485 aaKnown RBP eCLIP19.78■□□□□ 0.76
SPIN3-235ENST00000640104 FMN1Q68DA7 1419 aa19.76■□□□□ 0.75
SPIN3-235ENST00000640104 CLSPNQ9HAW4 1339 aa19.75■□□□□ 0.75
SPIN3-235ENST00000640104 SAMD9Q5K651 1589 aa19.75■□□□□ 0.75
SPIN3-235ENST00000640104 PBRM1Q86U86 1689 aa19.73■□□□□ 0.75
SPIN3-235ENST00000640104 SNAPC4Q5SXM2 1469 aa19.72■□□□□ 0.75
SPIN3-235ENST00000640104 FAM50AQ14320 339 aaKnown RBP19.69■□□□□ 0.74
SPIN3-235ENST00000640104 RAB3GAP2Q9H2M9 1393 aa19.67■□□□□ 0.74
SPIN3-235ENST00000640104 ADAMTS12P58397 1594 aa19.66■□□□□ 0.74
SPIN3-235ENST00000640104 GRIN2BQ13224 1484 aa19.64■□□□□ 0.74
SPIN3-235ENST00000640104 WDR62O43379 1518 aa19.64■□□□□ 0.73
SPIN3-235ENST00000640104 IFT140Q96RY7 1462 aa19.63■□□□□ 0.73
SPIN3-235ENST00000640104 ZNF608Q9ULD9 1512 aaPredicted RBP19.62■□□□□ 0.73
SPIN3-235ENST00000640104 MTUS2Q5JR59 1369 aa19.62■□□□□ 0.73
SPIN3-235ENST00000640104 SETD5Q9C0A6 1442 aa19.61■□□□□ 0.73
SPIN3-235ENST00000640104 LRRIQ1Q96JM4 1722 aa19.61■□□□□ 0.73
SPIN3-235ENST00000640104 IQGAP2Q13576 1575 aa19.59■□□□□ 0.73
SPIN3-235ENST00000640104 THOC2Q8NI27 1593 aaKnown RBP19.58■□□□□ 0.72
SPIN3-235ENST00000640104 FGD6Q6ZV73 1430 aa19.56■□□□□ 0.72
SPIN3-235ENST00000640104 ERCC6Q03468 1493 aa19.55■□□□□ 0.72
SPIN3-235ENST00000640104 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.55■□□□□ 0.72
SPIN3-235ENST00000640104 MAPKBP1O60336 1514 aa19.53■□□□□ 0.72
SPIN3-235ENST00000640104 NCOA2Q15596 1464 aa19.52■□□□□ 0.71
SPIN3-235ENST00000640104 EHBP1L1Q8N3D4 1523 aa19.51■□□□□ 0.71
SPIN3-235ENST00000640104 EIF4G3O43432 1585 aaKnown RBP19.5■□□□□ 0.71
SPIN3-235ENST00000640104 CCDC18Q5T9S5 1454 aa19.49■□□□□ 0.71
SPIN3-235ENST00000640104 SUPT6HQ7KZ85 1726 aaKnown RBP19.49■□□□□ 0.71
SPIN3-235ENST00000640104 HECW1Q76N89 1606 aa19.48■□□□□ 0.71
SPIN3-235ENST00000640104 MAGI3Q5TCQ9 1506 aa19.47■□□□□ 0.71
SPIN3-235ENST00000640104 UGGT2Q9NYU1 1516 aa19.47■□□□□ 0.71
SPIN3-235ENST00000640104 MYOM3Q5VTT5 1437 aa19.47■□□□□ 0.71
SPIN3-235ENST00000640104 SCAF1Q9H7N4 1312 aaKnown RBP19.45■□□□□ 0.7
SPIN3-235ENST00000640104 KIAA0586Q9BVV6 1533 aa19.44■□□□□ 0.7
SPIN3-235ENST00000640104 GRIN2AQ12879 1464 aa19.44■□□□□ 0.7
SPIN3-235ENST00000640104 MIER1Q8N108 512 aa19.44■□□□□ 0.7
SPIN3-235ENST00000640104 EPRSP07814 1512 aaKnown RBP19.43■□□□□ 0.7
SPIN3-235ENST00000640104 ACIN1Q9UKV3 1341 aaKnown RBP19.42■□□□□ 0.7
SPIN3-235ENST00000640104 PTPRKQ15262 1439 aa19.42■□□□□ 0.7
SPIN3-235ENST00000640104 NEUROD1Q13562 356 aa19.41■□□□□ 0.7
SPIN3-235ENST00000640104 ARHGEF11O15085 1522 aa19.41■□□□□ 0.7
SPIN3-235ENST00000640104 CDK13Q14004 1512 aaKnown RBP19.41■□□□□ 0.7
SPIN3-235ENST00000640104 ARID3CA6NKF2 412 aa19.4■□□□□ 0.7
SPIN3-235ENST00000640104 KIAA0556O60303 1618 aa19.39■□□□□ 0.69
SPIN3-235ENST00000640104 CENPBP07199 599 aaPredicted RBP19.39■□□□□ 0.69
SPIN3-235ENST00000640104 DISP1Q96F81 1524 aa19.39■□□□□ 0.69
SPIN3-235ENST00000640104 PTPN23Q9H3S7 1636 aa19.38■□□□□ 0.69
SPIN3-235ENST00000640104 MAGI1Q96QZ7 1491 aaPredicted RBP19.37■□□□□ 0.69
SPIN3-235ENST00000640104 SIN3AQ96ST3 1273 aa19.37■□□□□ 0.69
SPIN3-235ENST00000640104 HFM1A2PYH4 1435 aa19.37■□□□□ 0.69
SPIN3-235ENST00000640104 CHMP7Q8WUX9 453 aaPredicted RBP19.34■□□□□ 0.69
SPIN3-235ENST00000640104 SYNJ2O15056 1496 aa19.33■□□□□ 0.68
SPIN3-235ENST00000640104 YTHDC1Q96MU7 727 aaKnown RBP19.32■□□□□ 0.68
SPIN3-235ENST00000640104 NAIPQ13075 1403 aa19.31■□□□□ 0.68
SPIN3-235ENST00000640104 CEP170Q5SW79 1584 aa19.31■□□□□ 0.68
SPIN3-235ENST00000640104 FBLN2P98095 1184 aa19.31■□□□□ 0.68
SPIN3-235ENST00000640104 TCOF1Q13428 1488 aaKnown RBP19.31■□□□□ 0.68
SPIN3-235ENST00000640104 NUP153P49790 1475 aaKnown RBP19.29■□□□□ 0.68
SPIN3-235ENST00000640104 UACAQ9BZF9 1416 aa19.28■□□□□ 0.68
SPIN3-235ENST00000640104 RAPGEF6Q8TEU7 1601 aa19.28■□□□□ 0.68
SPIN3-235ENST00000640104 MIA2Q96PC5 1412 aa19.26■□□□□ 0.67
SPIN3-235ENST00000640104 CHIC2Q9UKJ5 165 aa19.25■□□□□ 0.67
SPIN3-235ENST00000640104 RRP7BPQ9NSQ0 103 aa19.24■□□□□ 0.67
SPIN3-235ENST00000640104 TIMELESSQ9UNS1 1208 aa19.24■□□□□ 0.67
SPIN3-235ENST00000640104 NUP160Q12769 1436 aa19.22■□□□□ 0.67
SPIN3-235ENST00000640104 PLB1Q6P1J6 1458 aa19.19■□□□□ 0.66
SPIN3-235ENST00000640104 GCC2Q8IWJ2 1684 aa19.19■□□□□ 0.66
SPIN3-235ENST00000640104 JPH4Q96JJ6 628 aa19.19■□□□□ 0.66
SPIN3-235ENST00000640104 CDK11AQ9UQ88 783 aaPredicted RBP19.19■□□□□ 0.66
SPIN3-235ENST00000640104 CARMIL2Q6F5E8 1435 aa19.18■□□□□ 0.66
SPIN3-235ENST00000640104 AKNAQ7Z591 1439 aa19.17■□□□□ 0.66
SPIN3-235ENST00000640104 GTF3C3Q9Y5Q9 886 aa19.17■□□□□ 0.66
SPIN3-235ENST00000640104 PPP1R15AO75807 674 aaPredicted RBP19.16■□□□□ 0.66
SPIN3-235ENST00000640104 TONSLQ96HA7 1378 aa19.16■□□□□ 0.66
SPIN3-235ENST00000640104 PRG4Q92954 1404 aaPredicted RBP19.15■□□□□ 0.66
SPIN3-235ENST00000640104 KDM6BO15054 1643 aa19.14■□□□□ 0.65
SPIN3-235ENST00000640104 TROQ12816 1431 aaPredicted RBP19.13■□□□□ 0.65
SPIN3-235ENST00000640104 DAPK1P53355 1430 aa19.12■□□□□ 0.65
SPIN3-235ENST00000640104 ZNF644Q9H582 1327 aaPredicted RBP19.12■□□□□ 0.65
SPIN3-235ENST00000640104 TRIM52Q96A61 297 aa19.12■□□□□ 0.65
SPIN3-235ENST00000640104 DNMT1P26358 1616 aaKnown RBP19.1■□□□□ 0.65
SPIN3-235ENST00000640104 ABCC5O15440 1437 aa19.1■□□□□ 0.65
SPIN3-235ENST00000640104 DENND4BO75064 1496 aaPredicted RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms