RNA–Protein interactions for RNA: ENST00000640104.1

SPIN3-235, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,776 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-235ENST00000640104 NISCHQ9Y2I1 1504 aa28.63■■■□□ 2.17
SPIN3-235ENST00000640104 CCDC180Q9P1Z9 1646 aa24.55■■□□□ 1.52
SPIN3-235ENST00000640104 ZCCHC6Q5VYS8 1495 aaKnown RBP24.16■■□□□ 1.46
SPIN3-235ENST00000640104 SHROOM4Q9ULL8 1493 aa24.07■■□□□ 1.44
SPIN3-235ENST00000640104 DCAF8L2P0C7V8 631 aa23.72■■□□□ 1.39
SPIN3-235ENST00000640104 DCAF1Q9Y4B6 1507 aa23.53■■□□□ 1.36
SPIN3-235ENST00000640104 SUPT5HO00267 1087 aaKnown RBP23.44■■□□□ 1.34
SPIN3-235ENST00000640104 MYO15BQ96JP2 1530 aa22.99■■□□□ 1.27
SPIN3-235ENST00000640104 ABCC9O60706 1549 aa22.93■■□□□ 1.26
SPIN3-235ENST00000640104 SCRIBQ14160 1630 aa22.89■■□□□ 1.25
SPIN3-235ENST00000640104 NACADO15069 1562 aa22.75■■□□□ 1.23
SPIN3-235ENST00000640104 CHIC1Q5VXU3 224 aa22.66■■□□□ 1.22
SPIN3-235ENST00000640104 RSF1Q96T23 1441 aaPredicted RBP22.5■■□□□ 1.19
SPIN3-235ENST00000640104 RB1CC1Q8TDY2 1594 aa22.45■■□□□ 1.18
SPIN3-235ENST00000640104 CECR2Q9BXF3 1484 aa22.31■■□□□ 1.16
SPIN3-235ENST00000640104 MROH2BQ7Z745 1585 aa22.22■■□□□ 1.15
SPIN3-235ENST00000640104 WIZO95785 1651 aa22.08■■□□□ 1.12
SPIN3-235ENST00000640104 UNC13AQ9UPW8 1703 aa22.07■■□□□ 1.12
SPIN3-235ENST00000640104 BAZ1AQ9NRL2 1556 aaPredicted RBP22.03■■□□□ 1.12
SPIN3-235ENST00000640104 LOC105371045A0A1W2PR82 267 aa21.93■■□□□ 1.1
SPIN3-235ENST00000640104 TRIM41Q8WV44 630 aa21.9■■□□□ 1.1
SPIN3-235ENST00000640104 SMARCA4P51532 1647 aa21.88■■□□□ 1.09
SPIN3-235ENST00000640104 PABPN1Q86U42 306 aaKnown RBP eCLIP21.82■■□□□ 1.08
SPIN3-235ENST00000640104 BICRAQ9NZM4 1560 aa21.82■■□□□ 1.08
SPIN3-235ENST00000640104 TOP2AP11388 1531 aaKnown RBP21.77■■□□□ 1.08
SPIN3-235ENST00000640104 EIF4G1Q04637 1599 aaKnown RBP21.67■■□□□ 1.06
SPIN3-235ENST00000640104 FAM9AQ8IZU1 332 aaPredicted RBP21.66■■□□□ 1.06
SPIN3-235ENST00000640104 CCDC88BA6NC98 1476 aa21.63■■□□□ 1.05
SPIN3-235ENST00000640104 SMARCA2P51531 1590 aa21.62■■□□□ 1.05
SPIN3-235ENST00000640104 PCGF6Q9BYE7 350 aa21.59■■□□□ 1.05
SPIN3-235ENST00000640104 PEG3Q9GZU2 1588 aa21.49■■□□□ 1.03
SPIN3-235ENST00000640104 ABCC8Q09428 1581 aa21.45■■□□□ 1.02
SPIN3-235ENST00000640104 EHMT2Q96KQ7 1210 aa21.45■■□□□ 1.02
SPIN3-235ENST00000640104 HRCP23327 699 aa21.38■■□□□ 1.01
SPIN3-235ENST00000640104 ATAD2BQ9ULI0 1458 aa21.38■■□□□ 1.01
SPIN3-235ENST00000640104 BAZ1BQ9UIG0 1483 aaKnown RBP21.32■■□□□ 1
SPIN3-235ENST00000640104 TRIM26Q12899 539 aaPredicted RBP21.3■■□□□ 1
SPIN3-235ENST00000640104 SOGA1O94964 1423 aa21.18■□□□□ 0.98
SPIN3-235ENST00000640104 WRNQ14191 1432 aaPredicted RBP eCLIP21.16■□□□□ 0.98
SPIN3-235ENST00000640104 RUSC2Q8N2Y8 1516 aa21.08■□□□□ 0.97
SPIN3-235ENST00000640104 EEA1Q15075 1411 aa21.08■□□□□ 0.96
SPIN3-235ENST00000640104 SYNJ1O43426 1573 aa21.07■□□□□ 0.96
SPIN3-235ENST00000640104 NCAPD3P42695 1498 aa21.03■□□□□ 0.96
SPIN3-235ENST00000640104 HMGXB3Q12766 1538 aa21.03■□□□□ 0.96
SPIN3-235ENST00000640104 CSRNP3Q8WYN3 585 aa21.03■□□□□ 0.96
SPIN3-235ENST00000640104 PPARGC1BQ86YN6 1023 aaKnown RBP20.95■□□□□ 0.94
SPIN3-235ENST00000640104 CEP162Q5TB80 1403 aa20.95■□□□□ 0.94
SPIN3-235ENST00000640104 TNIKQ9UKE5 1360 aa20.94■□□□□ 0.94
SPIN3-235ENST00000640104 GOLGA3Q08378 1498 aa20.9■□□□□ 0.94
SPIN3-235ENST00000640104 UBTFP17480 764 aaKnown RBP20.9■□□□□ 0.94
SPIN3-235ENST00000640104 TOP2BQ02880 1626 aa20.86■□□□□ 0.93
SPIN3-235ENST00000640104 CEP164Q9UPV0 1460 aa20.82■□□□□ 0.92
SPIN3-235ENST00000640104 KIF21BO75037 1637 aa20.8■□□□□ 0.92
SPIN3-235ENST00000640104 BIVM-ERCC5R4GMW8 1640 aa20.8■□□□□ 0.92
SPIN3-235ENST00000640104 CFTRP13569 1480 aa20.77■□□□□ 0.92
SPIN3-235ENST00000640104 CUX1P39880 1505 aa20.71■□□□□ 0.91
SPIN3-235ENST00000640104 ZEB1P37275 1124 aaPredicted RBP20.69■□□□□ 0.9
SPIN3-235ENST00000640104 RAPGEF2Q9Y4G8 1499 aa20.69■□□□□ 0.9
SPIN3-235ENST00000640104 TTBK1Q5TCY1 1321 aaPredicted RBP20.69■□□□□ 0.9
SPIN3-235ENST00000640104 CC2D2AQ9P2K1 1620 aa20.67■□□□□ 0.9
SPIN3-235ENST00000640104 CLIP1P30622 1438 aa20.63■□□□□ 0.89
SPIN3-235ENST00000640104 PRDM2Q13029 1718 aa20.61■□□□□ 0.89
SPIN3-235ENST00000640104 CADPSQ9ULU8 1353 aa20.6■□□□□ 0.89
SPIN3-235ENST00000640104 PRXQ9BXM0 1461 aa20.55■□□□□ 0.88
SPIN3-235ENST00000640104 KIF27Q86VH2 1401 aa20.55■□□□□ 0.88
SPIN3-235ENST00000640104 ERICH3Q5RHP9 1530 aa20.54■□□□□ 0.88
SPIN3-235ENST00000640104 RANGAP1P46060 587 aaPredicted RBP20.53■□□□□ 0.88
SPIN3-235ENST00000640104 VPS8Q8N3P4 1428 aa20.51■□□□□ 0.87
SPIN3-235ENST00000640104 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.49■□□□□ 0.87
SPIN3-235ENST00000640104 CCER1Q8TC90 406 aaPredicted RBP20.43■□□□□ 0.86
SPIN3-235ENST00000640104 CUX2O14529 1486 aa20.41■□□□□ 0.86
SPIN3-235ENST00000640104 FGD5Q6ZNL6 1462 aa20.4■□□□□ 0.86
SPIN3-235ENST00000640104 FANCD2Q9BXW9 1451 aa20.4■□□□□ 0.86
SPIN3-235ENST00000640104 APLP2Q06481 763 aa20.38■□□□□ 0.85
SPIN3-235ENST00000640104 ARAP1Q96P48 1450 aa20.35■□□□□ 0.85
SPIN3-235ENST00000640104 NESP48681 1621 aa20.33■□□□□ 0.85
SPIN3-235ENST00000640104 IGF1RP08069 1367 aa20.32■□□□□ 0.84
SPIN3-235ENST00000640104 DNMBPQ6XZF7 1577 aa20.27■□□□□ 0.84
SPIN3-235ENST00000640104 CARMIL1Q5VZK9 1371 aa20.24■□□□□ 0.83
SPIN3-235ENST00000640104 TOPBP1Q92547 1522 aa20.24■□□□□ 0.83
SPIN3-235ENST00000640104 ARHGAP35Q9NRY4 1499 aa20.23■□□□□ 0.83
SPIN3-235ENST00000640104 HNRNPUL2Q1KMD3 747 aaKnown RBP20.22■□□□□ 0.83
SPIN3-235ENST00000640104 RAD54L2Q9Y4B4 1467 aa20.21■□□□□ 0.83
SPIN3-235ENST00000640104 LAMC3Q9Y6N6 1575 aa20.2■□□□□ 0.82
SPIN3-235ENST00000640104 POLA1P09884 1462 aaPredicted RBP20.2■□□□□ 0.82
SPIN3-235ENST00000640104 ABCA10Q8WWZ4 1543 aa20.17■□□□□ 0.82
SPIN3-235ENST00000640104 DNAJC5BQ9UF47 199 aa20.16■□□□□ 0.82
SPIN3-235ENST00000640104 KANK4Q5T7N3 995 aaPredicted RBP20.14■□□□□ 0.82
SPIN3-235ENST00000640104 URB2Q14146 1524 aaKnown RBP20.12■□□□□ 0.81
SPIN3-235ENST00000640104 PDS5BQ9NTI5 1447 aa20.07■□□□□ 0.8
SPIN3-235ENST00000640104 CUL7Q14999 1698 aa20.02■□□□□ 0.8
SPIN3-235ENST00000640104 WDR97A6NE52 1622 aa20.02■□□□□ 0.8
SPIN3-235ENST00000640104 KIF21AQ7Z4S6 1674 aa20■□□□□ 0.79
SPIN3-235ENST00000640104 RRBP1Q9P2E9 1410 aaKnown RBP19.98■□□□□ 0.79
SPIN3-235ENST00000640104 TDRD9Q8NDG6 1382 aaKnown RBP19.97■□□□□ 0.79
SPIN3-235ENST00000640104 P3H3Q8IVL6 736 aa19.96■□□□□ 0.79
SPIN3-235ENST00000640104 TIAM1Q13009 1591 aa19.96■□□□□ 0.79
SPIN3-235ENST00000640104 ABCA5Q8WWZ7 1642 aa19.95■□□□□ 0.78
SPIN3-235ENST00000640104 FHAD1B1AJZ9 1412 aa19.94■□□□□ 0.78
SPIN3-235ENST00000640104 MAP3K1Q13233 1512 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms