RNA–Protein interactions for RNA: ENST00000639738.1

SCARB2-219, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 1,517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-219ENST00000639738 CTTNBP2Q8WZ74 1663 aa33.7■■■□□ 2.99
SCARB2-219ENST00000639738 CEP170Q5SW79 1584 aa33.66■■■□□ 2.98
SCARB2-219ENST00000639738 NUP160Q12769 1436 aa33.66■■■□□ 2.98
SCARB2-219ENST00000639738 FBLN2P98095 1184 aa33.64■■■□□ 2.98
SCARB2-219ENST00000639738 RIMBP3CA6NJZ7 1639 aa33.61■■■□□ 2.97
SCARB2-219ENST00000639738 RIMBP3BA6NNM3 1639 aa33.61■■■□□ 2.97
SCARB2-219ENST00000639738 RIMBP3Q9UFD9 1639 aa33.61■■■□□ 2.97
SCARB2-219ENST00000639738 CEP162Q5TB80 1403 aa33.57■■■□□ 2.97
SCARB2-219ENST00000639738 KIAA0586Q9BVV6 1533 aa33.57■■■□□ 2.96
SCARB2-219ENST00000639738 IQGAP2Q13576 1575 aa33.52■■■□□ 2.96
SCARB2-219ENST00000639738 ARHGEF11O15085 1522 aa33.5■■■□□ 2.95
SCARB2-219ENST00000639738 CLIP1P30622 1438 aa33.45■■■□□ 2.95
SCARB2-219ENST00000639738 CLASP1Q7Z460 1538 aa33.41■■■□□ 2.94
SCARB2-219ENST00000639738 UGGT2Q9NYU1 1516 aa33.41■■■□□ 2.94
SCARB2-219ENST00000639738 ARHGAP35Q9NRY4 1499 aa33.4■■■□□ 2.94
SCARB2-219ENST00000639738 SAMD9Q5K651 1589 aa33.37■■■□□ 2.93
SCARB2-219ENST00000639738 RANGAP1P46060 587 aaPredicted RBP33.35■■■□□ 2.93
SCARB2-219ENST00000639738 EFCAB5A4FU69 1503 aa33.33■■■□□ 2.93
SCARB2-219ENST00000639738 SHROOM2Q13796 1616 aa33.32■■■□□ 2.93
SCARB2-219ENST00000639738 ARAP1Q96P48 1450 aa33.29■■■□□ 2.92
SCARB2-219ENST00000639738 JPH4Q96JJ6 628 aa33.29■■■□□ 2.92
SCARB2-219ENST00000639738 DISP1Q96F81 1524 aa33.28■■■□□ 2.92
SCARB2-219ENST00000639738 KIAA0556O60303 1618 aa33.21■■■□□ 2.91
SCARB2-219ENST00000639738 FHOD3Q2V2M9 1422 aa33.16■■■□□ 2.9
SCARB2-219ENST00000639738 P3H3Q8IVL6 736 aa33.15■■■□□ 2.9
SCARB2-219ENST00000639738 PRG4Q92954 1404 aaPredicted RBP33.13■■■□□ 2.89
SCARB2-219ENST00000639738 CYB5RLQ6IPT4 315 aa33.12■■■□□ 2.89
SCARB2-219ENST00000639738 ERCC6L2Q5T890 1561 aa33.1■■■□□ 2.89
SCARB2-219ENST00000639738 VPS8Q8N3P4 1428 aa33.09■■■□□ 2.89
SCARB2-219ENST00000639738 CARMIL2Q6F5E8 1435 aa33.08■■■□□ 2.89
SCARB2-219ENST00000639738 FMN1Q68DA7 1419 aa32.97■■■□□ 2.87
SCARB2-219ENST00000639738 PCF11O94913 1555 aaKnown RBP32.91■■■□□ 2.86
SCARB2-219ENST00000639738 CASKIN1Q8WXD9 1431 aa32.89■■■□□ 2.86
SCARB2-219ENST00000639738 PTPRGP23470 1445 aa32.85■■■□□ 2.85
SCARB2-219ENST00000639738 FYCO1Q9BQS8 1478 aa32.85■■■□□ 2.85
SCARB2-219ENST00000639738 ABCA8O94911 1581 aa32.81■■■□□ 2.84
SCARB2-219ENST00000639738 LRRIQ1Q96JM4 1722 aa32.8■■■□□ 2.84
SCARB2-219ENST00000639738 RAPGEF6Q8TEU7 1601 aa32.79■■■□□ 2.84
SCARB2-219ENST00000639738 PLB1Q6P1J6 1458 aa32.79■■■□□ 2.84
SCARB2-219ENST00000639738 TTBK1Q5TCY1 1321 aaPredicted RBP32.76■■■□□ 2.83
SCARB2-219ENST00000639738 HECW1Q76N89 1606 aa32.72■■■□□ 2.83
SCARB2-219ENST00000639738 NUP153P49790 1475 aaKnown RBP32.72■■■□□ 2.83
SCARB2-219ENST00000639738 MAP3K1Q13233 1512 aa32.71■■■□□ 2.83
SCARB2-219ENST00000639738 UACAQ9BZF9 1416 aa32.68■■■□□ 2.82
SCARB2-219ENST00000639738 TRHP20396 242 aaPredicted RBP32.67■■■□□ 2.82
SCARB2-219ENST00000639738 TIAM1Q13009 1591 aa32.66■■■□□ 2.82
SCARB2-219ENST00000639738 CFAP43Q8NDM7 1665 aa32.66■■■□□ 2.82
SCARB2-219ENST00000639738 EPRSP07814 1512 aaKnown RBP32.64■■■□□ 2.82
SCARB2-219ENST00000639738 UHRF1BP1LA0JNW5 1464 aa32.62■■■□□ 2.81
SCARB2-219ENST00000639738 ABCC2Q92887 1545 aa32.62■■■□□ 2.81
SCARB2-219ENST00000639738 ATP1B4Q9UN42 357 aaPredicted RBP32.61■■■□□ 2.81
SCARB2-219ENST00000639738 CCDC18Q5T9S5 1454 aa32.59■■■□□ 2.81
SCARB2-219ENST00000639738 CDK13Q14004 1512 aaKnown RBP32.57■■■□□ 2.81
SCARB2-219ENST00000639738 ADCY10Q96PN6 1610 aa32.56■■■□□ 2.8
SCARB2-219ENST00000639738 KANK4Q5T7N3 995 aaPredicted RBP32.56■■■□□ 2.8
SCARB2-219ENST00000639738 ATP10BO94823 1461 aa32.55■■■□□ 2.8
SCARB2-219ENST00000639738 APLP2Q06481 763 aa32.54■■■□□ 2.8
SCARB2-219ENST00000639738 LRRC9Q6ZRR7 1453 aa32.5■■■□□ 2.79
SCARB2-219ENST00000639738 PPARGC1BQ86YN6 1023 aaKnown RBP32.5■■■□□ 2.79
SCARB2-219ENST00000639738 MAGI3Q5TCQ9 1506 aa32.49■■■□□ 2.79
SCARB2-219ENST00000639738 KDM5BQ9UGL1 1544 aa32.48■■■□□ 2.79
SCARB2-219ENST00000639738 ARID3CA6NKF2 412 aa32.46■■■□□ 2.79
SCARB2-219ENST00000639738 ZCCHC11Q5TAX3 1644 aaKnown RBP32.42■■■□□ 2.78
SCARB2-219ENST00000639738 EHBP1L1Q8N3D4 1523 aa32.36■■■□□ 2.77
SCARB2-219ENST00000639738 MTUS2Q5JR59 1369 aa32.32■■■□□ 2.76
SCARB2-219ENST00000639738 TROQ12816 1431 aaPredicted RBP32.3■■■□□ 2.76
SCARB2-219ENST00000639738 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.29■■■□□ 2.76
SCARB2-219ENST00000639738 HNRNPUL2Q1KMD3 747 aaKnown RBP32.29■■■□□ 2.76
SCARB2-219ENST00000639738 CDK11AQ9UQ88 783 aaPredicted RBP32.28■■■□□ 2.76
SCARB2-219ENST00000639738 SUPT6HQ7KZ85 1726 aaKnown RBP32.25■■■□□ 2.75
SCARB2-219ENST00000639738 PLEKHD1A6NEE1 506 aa32.24■■■□□ 2.75
SCARB2-219ENST00000639738 NCOA2Q15596 1464 aa32.21■■■□□ 2.75
SCARB2-219ENST00000639738 KIF14Q15058 1648 aa32.2■■■□□ 2.75
SCARB2-219ENST00000639738 KIF13AQ9H1H9 1805 aa32.2■■■□□ 2.74
SCARB2-219ENST00000639738 PHLDB1Q86UU1 1377 aa32.17■■■□□ 2.74
SCARB2-219ENST00000639738 ASXL2Q76L83 1435 aa32.14■■■□□ 2.74
SCARB2-219ENST00000639738 ABCC10Q5T3U5 1492 aa32.13■■■□□ 2.73
SCARB2-219ENST00000639738 WDR7Q9Y4E6 1490 aa32.12■■■□□ 2.73
SCARB2-219ENST00000639738 NPM1P06748 294 aaKnown RBP eCLIP32.12■■■□□ 2.73
SCARB2-219ENST00000639738 MAPKBP1O60336 1514 aa32.11■■■□□ 2.73
SCARB2-219ENST00000639738 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.05■■■□□ 2.726e-6■■■■■ 38.2
SCARB2-219ENST00000639738 RRBP1Q9P2E9 1410 aaKnown RBP32.05■■■□□ 2.72
SCARB2-219ENST00000639738 MYOM3Q5VTT5 1437 aa32.03■■■□□ 2.72
SCARB2-219ENST00000639738 TRIM26Q12899 539 aaPredicted RBP32.03■■■□□ 2.72
SCARB2-219ENST00000639738 TTC37Q6PGP7 1564 aa32.01■■■□□ 2.72
SCARB2-219ENST00000639738 CDC42BPAQ5VT25 1732 aa32■■■□□ 2.71
SCARB2-219ENST00000639738 GPATCH8Q9UKJ3 1502 aaKnown RBP32■■■□□ 2.71
SCARB2-219ENST00000639738 KCNH8Q96L42 1107 aa31.99■■■□□ 2.71
SCARB2-219ENST00000639738 FGD6Q6ZV73 1430 aa31.96■■■□□ 2.71
SCARB2-219ENST00000639738 ABCA9Q8IUA7 1624 aa31.96■■■□□ 2.71
SCARB2-219ENST00000639738 CCNB3Q8WWL7 1395 aa31.96■■■□□ 2.71
SCARB2-219ENST00000639738 DIP2BQ9P265 1576 aa31.95■■■□□ 2.71
SCARB2-219ENST00000639738 ITSN2Q9NZM3 1697 aa31.94■■■□□ 2.7
SCARB2-219ENST00000639738 MIA2Q96PC5 1412 aa31.93■■■□□ 2.7
SCARB2-219ENST00000639738 CDC42BPBQ9Y5S2 1711 aa31.91■■■□□ 2.7
SCARB2-219ENST00000639738 PREX2Q70Z35 1606 aa31.9■■■□□ 2.7
SCARB2-219ENST00000639738 MYO5CQ9NQX4 1742 aa31.88■■■□□ 2.69
SCARB2-219ENST00000639738 TCOF1Q13428 1488 aaKnown RBP31.88■■■□□ 2.69
SCARB2-219ENST00000639738 PTPN23Q9H3S7 1636 aa31.87■■■□□ 2.69
SCARB2-219ENST00000639738 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.86■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms