RNA–Protein interactions for RNA: ENST00000638940.1

SPIN3-216, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,785 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-216ENST00000638940 TIAM1Q13009 1591 aa16.09■□□□□ 0.17
SPIN3-216ENST00000638940 RRBP1Q9P2E9 1410 aaKnown RBP16.09■□□□□ 0.17
SPIN3-216ENST00000638940 AQRO60306 1485 aaKnown RBP eCLIP16.08■□□□□ 0.16
SPIN3-216ENST00000638940 CFAP43Q8NDM7 1665 aa16.07■□□□□ 0.16
SPIN3-216ENST00000638940 PBRM1Q86U86 1689 aa16.06■□□□□ 0.16
SPIN3-216ENST00000638940 TDRD9Q8NDG6 1382 aaKnown RBP16.05■□□□□ 0.16
SPIN3-216ENST00000638940 KANK4Q5T7N3 995 aaPredicted RBP16.05■□□□□ 0.16
SPIN3-216ENST00000638940 WDR62O43379 1518 aa16.05■□□□□ 0.16
SPIN3-216ENST00000638940 SAMD9Q5K651 1589 aa16.03■□□□□ 0.16
SPIN3-216ENST00000638940 FYCO1Q9BQS8 1478 aa16.03■□□□□ 0.16
SPIN3-216ENST00000638940 PCF11O94913 1555 aaKnown RBP16.02■□□□□ 0.16
SPIN3-216ENST00000638940 CASKIN1Q8WXD9 1431 aa16■□□□□ 0.15
SPIN3-216ENST00000638940 IFT140Q96RY7 1462 aa16■□□□□ 0.15
SPIN3-216ENST00000638940 LRRC9Q6ZRR7 1453 aa16■□□□□ 0.15
SPIN3-216ENST00000638940 FMN1Q68DA7 1419 aa15.98■□□□□ 0.15
SPIN3-216ENST00000638940 ADAMTS12P58397 1594 aa15.98■□□□□ 0.15
SPIN3-216ENST00000638940 HNRNPUL2Q1KMD3 747 aaKnown RBP15.97■□□□□ 0.15
SPIN3-216ENST00000638940 FHOD3Q2V2M9 1422 aa15.96■□□□□ 0.15
SPIN3-216ENST00000638940 GRIN2BQ13224 1484 aa15.96■□□□□ 0.15
SPIN3-216ENST00000638940 CCNB3Q8WWL7 1395 aa15.96■□□□□ 0.14
SPIN3-216ENST00000638940 THOC2Q8NI27 1593 aaKnown RBP15.94■□□□□ 0.14
SPIN3-216ENST00000638940 SNAPC4Q5SXM2 1469 aa15.93■□□□□ 0.14
SPIN3-216ENST00000638940 CLSPNQ9HAW4 1339 aa15.93■□□□□ 0.14
SPIN3-216ENST00000638940 IQGAP2Q13576 1575 aa15.89■□□□□ 0.13
SPIN3-216ENST00000638940 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.87■□□□□ 0.13
SPIN3-216ENST00000638940 P3H3Q8IVL6 736 aa15.86■□□□□ 0.13
SPIN3-216ENST00000638940 UGGT2Q9NYU1 1516 aa15.84■□□□□ 0.13
SPIN3-216ENST00000638940 ERCC6Q03468 1493 aa15.84■□□□□ 0.13
SPIN3-216ENST00000638940 EIF4G3O43432 1585 aaKnown RBP15.84■□□□□ 0.13
SPIN3-216ENST00000638940 PHLDB1Q86UU1 1377 aa15.84■□□□□ 0.13
SPIN3-216ENST00000638940 ZNF608Q9ULD9 1512 aaPredicted RBP15.83■□□□□ 0.13
SPIN3-216ENST00000638940 LRRIQ1Q96JM4 1722 aa15.83■□□□□ 0.13
SPIN3-216ENST00000638940 DHX57Q6P158 1386 aaKnown RBP15.82■□□□□ 0.12
SPIN3-216ENST00000638940 CCDC18Q5T9S5 1454 aa15.8■□□□□ 0.12
SPIN3-216ENST00000638940 MAGI1Q96QZ7 1491 aaPredicted RBP15.8■□□□□ 0.12
SPIN3-216ENST00000638940 KIAA0586Q9BVV6 1533 aa15.79■□□□□ 0.12
SPIN3-216ENST00000638940 HECW1Q76N89 1606 aa15.79■□□□□ 0.12
SPIN3-216ENST00000638940 EHBP1L1Q8N3D4 1523 aa15.78■□□□□ 0.12
SPIN3-216ENST00000638940 GRIN2AQ12879 1464 aa15.77■□□□□ 0.11
SPIN3-216ENST00000638940 SUPT6HQ7KZ85 1726 aaKnown RBP15.76■□□□□ 0.11
SPIN3-216ENST00000638940 ARHGEF11O15085 1522 aa15.74■□□□□ 0.11
SPIN3-216ENST00000638940 MTUS2Q5JR59 1369 aa15.73■□□□□ 0.11
SPIN3-216ENST00000638940 SETD5Q9C0A6 1442 aa15.73■□□□□ 0.11
SPIN3-216ENST00000638940 ATP1B4Q9UN42 357 aaPredicted RBP15.73■□□□□ 0.11
SPIN3-216ENST00000638940 FGD6Q6ZV73 1430 aa15.73■□□□□ 0.11
SPIN3-216ENST00000638940 KIAA0556O60303 1618 aa15.73■□□□□ 0.11
SPIN3-216ENST00000638940 SYNJ2O15056 1496 aa15.72■□□□□ 0.11
SPIN3-216ENST00000638940 ZNF316A6NFI3 1004 aaPredicted RBP15.7■□□□□ 0.1
SPIN3-216ENST00000638940 RAB3GAP2Q9H2M9 1393 aa15.7■□□□□ 0.1
SPIN3-216ENST00000638940 NCOA2Q15596 1464 aa15.7■□□□□ 0.1
SPIN3-216ENST00000638940 DISP1Q96F81 1524 aa15.69■□□□□ 0.1
SPIN3-216ENST00000638940 MYOM3Q5VTT5 1437 aa15.69■□□□□ 0.1
SPIN3-216ENST00000638940 EPRSP07814 1512 aaKnown RBP15.68■□□□□ 0.1
SPIN3-216ENST00000638940 MYT1Q01538 1121 aa15.67■□□□□ 0.1
SPIN3-216ENST00000638940 MAGI3Q5TCQ9 1506 aa15.66■□□□□ 0.1
SPIN3-216ENST00000638940 CEP170Q5SW79 1584 aa15.66■□□□□ 0.1
SPIN3-216ENST00000638940 FAM50AQ14320 339 aaKnown RBP15.65■□□□□ 0.1
SPIN3-216ENST00000638940 NUP160Q12769 1436 aa15.65■□□□□ 0.1
SPIN3-216ENST00000638940 TCOF1Q13428 1488 aaKnown RBP15.64■□□□□ 0.09
SPIN3-216ENST00000638940 DIEXFQ68CQ4 756 aaKnown RBP15.64■□□□□ 0.09
SPIN3-216ENST00000638940 PTPN23Q9H3S7 1636 aa15.63■□□□□ 0.09
SPIN3-216ENST00000638940 MAPKBP1O60336 1514 aa15.63■□□□□ 0.09
SPIN3-216ENST00000638940 ITGAEP38570 1179 aa15.63■□□□□ 0.09
SPIN3-216ENST00000638940 RAPGEF6Q8TEU7 1601 aa15.62■□□□□ 0.09
SPIN3-216ENST00000638940 MIA2Q96PC5 1412 aa15.61■□□□□ 0.09
SPIN3-216ENST00000638940 CHMP7Q8WUX9 453 aaPredicted RBP15.59■□□□□ 0.09
SPIN3-216ENST00000638940 HFM1A2PYH4 1435 aa15.59■□□□□ 0.09
SPIN3-216ENST00000638940 CDK13Q14004 1512 aaKnown RBP15.58■□□□□ 0.08
SPIN3-216ENST00000638940 NUP153P49790 1475 aaKnown RBP15.57■□□□□ 0.08
SPIN3-216ENST00000638940 CARMIL2Q6F5E8 1435 aa15.56■□□□□ 0.08
SPIN3-216ENST00000638940 AKNAQ7Z591 1439 aa15.56■□□□□ 0.08
SPIN3-216ENST00000638940 PTPRKQ15262 1439 aa15.54■□□□□ 0.08
SPIN3-216ENST00000638940 TIMELESSQ9UNS1 1208 aa15.54■□□□□ 0.08
SPIN3-216ENST00000638940 GCC2Q8IWJ2 1684 aa15.53■□□□□ 0.08
SPIN3-216ENST00000638940 ADCY10Q96PN6 1610 aa15.51■□□□□ 0.07
SPIN3-216ENST00000638940 NAIPQ13075 1403 aa15.51■□□□□ 0.07
SPIN3-216ENST00000638940 UACAQ9BZF9 1416 aa15.5■□□□□ 0.07
SPIN3-216ENST00000638940 CDK11AQ9UQ88 783 aaPredicted RBP15.5■□□□□ 0.07
SPIN3-216ENST00000638940 JPH4Q96JJ6 628 aa15.49■□□□□ 0.07
SPIN3-216ENST00000638940 ACIN1Q9UKV3 1341 aaKnown RBP15.49■□□□□ 0.07
SPIN3-216ENST00000638940 ABCA8O94911 1581 aa15.48■□□□□ 0.07
SPIN3-216ENST00000638940 TROQ12816 1431 aaPredicted RBP15.47■□□□□ 0.07
SPIN3-216ENST00000638940 ITSN2Q9NZM3 1697 aa15.47■□□□□ 0.07
SPIN3-216ENST00000638940 DNMT1P26358 1616 aaKnown RBP15.45■□□□□ 0.06
SPIN3-216ENST00000638940 PLB1Q6P1J6 1458 aa15.44■□□□□ 0.06
SPIN3-216ENST00000638940 ROCK1Q13464 1354 aa15.44■□□□□ 0.06
SPIN3-216ENST00000638940 FBLN2P98095 1184 aa15.43■□□□□ 0.06
SPIN3-216ENST00000638940 CHD1O14646 1710 aa15.42■□□□□ 0.06
SPIN3-216ENST00000638940 SHROOM2Q13796 1616 aa15.42■□□□□ 0.06
SPIN3-216ENST00000638940 DAPK1P53355 1430 aa15.4■□□□□ 0.06
SPIN3-216ENST00000638940 SCAF1Q9H7N4 1312 aaKnown RBP15.38■□□□□ 0.05
SPIN3-216ENST00000638940 PRG4Q92954 1404 aaPredicted RBP15.38■□□□□ 0.05
SPIN3-216ENST00000638940 ABCC5O15440 1437 aa15.37■□□□□ 0.05
SPIN3-216ENST00000638940 GPATCH8Q9UKJ3 1502 aaKnown RBP15.37■□□□□ 0.05
SPIN3-216ENST00000638940 KIF14Q15058 1648 aa15.36■□□□□ 0.05
SPIN3-216ENST00000638940 ATP10BO94823 1461 aa15.35■□□□□ 0.05
SPIN3-216ENST00000638940 ADGBQ8N7X0 1667 aa15.35■□□□□ 0.05
SPIN3-216ENST00000638940 SIN3AQ96ST3 1273 aa15.35■□□□□ 0.05
SPIN3-216ENST00000638940 CROCC2H7BZ55 1655 aa15.35■□□□□ 0.05
SPIN3-216ENST00000638940 CAMSAP2Q08AD1 1489 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms