RNA–Protein interactions for RNA: ENST00000638940.1

SPIN3-216, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,785 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-216ENST00000638940 NISCHQ9Y2I1 1504 aa23.23■■□□□ 1.31
SPIN3-216ENST00000638940 CCDC180Q9P1Z9 1646 aa20.13■□□□□ 0.81
SPIN3-216ENST00000638940 ZCCHC6Q5VYS8 1495 aaKnown RBP19.6■□□□□ 0.73
SPIN3-216ENST00000638940 DCAF1Q9Y4B6 1507 aa19.28■□□□□ 0.68
SPIN3-216ENST00000638940 SHROOM4Q9ULL8 1493 aa19.07■□□□□ 0.64
SPIN3-216ENST00000638940 MYO15BQ96JP2 1530 aa18.92■□□□□ 0.62
SPIN3-216ENST00000638940 DCAF8L2P0C7V8 631 aa18.86■□□□□ 0.61
SPIN3-216ENST00000638940 NACADO15069 1562 aa18.63■□□□□ 0.57
SPIN3-216ENST00000638940 SUPT5HO00267 1087 aaKnown RBP18.55■□□□□ 0.56
SPIN3-216ENST00000638940 ABCC9O60706 1549 aa18.51■□□□□ 0.55
SPIN3-216ENST00000638940 SCRIBQ14160 1630 aa18.45■□□□□ 0.54
SPIN3-216ENST00000638940 RB1CC1Q8TDY2 1594 aa18.35■□□□□ 0.53
SPIN3-216ENST00000638940 RSF1Q96T23 1441 aaPredicted RBP18.15■□□□□ 0.5
SPIN3-216ENST00000638940 CHIC1Q5VXU3 224 aa18.06■□□□□ 0.48
SPIN3-216ENST00000638940 UNC13AQ9UPW8 1703 aa18.01■□□□□ 0.47
SPIN3-216ENST00000638940 CECR2Q9BXF3 1484 aa17.96■□□□□ 0.46
SPIN3-216ENST00000638940 MROH2BQ7Z745 1585 aa17.92■□□□□ 0.46
SPIN3-216ENST00000638940 BAZ1AQ9NRL2 1556 aaPredicted RBP17.91■□□□□ 0.46
SPIN3-216ENST00000638940 WIZO95785 1651 aa17.81■□□□□ 0.44
SPIN3-216ENST00000638940 BICRAQ9NZM4 1560 aa17.78■□□□□ 0.44
SPIN3-216ENST00000638940 SMARCA4P51532 1647 aa17.77■□□□□ 0.44
SPIN3-216ENST00000638940 TOP2AP11388 1531 aaKnown RBP17.67■□□□□ 0.42
SPIN3-216ENST00000638940 PEG3Q9GZU2 1588 aa17.59■□□□□ 0.41
SPIN3-216ENST00000638940 EIF4G1Q04637 1599 aaKnown RBP17.57■□□□□ 0.4
SPIN3-216ENST00000638940 SMARCA2P51531 1590 aa17.51■□□□□ 0.39
SPIN3-216ENST00000638940 PABPN1Q86U42 306 aaKnown RBP eCLIP17.5■□□□□ 0.39
SPIN3-216ENST00000638940 TRIM41Q8WV44 630 aa17.47■□□□□ 0.39
SPIN3-216ENST00000638940 CCDC88BA6NC98 1476 aa17.46■□□□□ 0.39
SPIN3-216ENST00000638940 ATAD2BQ9ULI0 1458 aa17.36■□□□□ 0.37
SPIN3-216ENST00000638940 LOC105371045A0A1W2PR82 267 aa17.32■□□□□ 0.36
SPIN3-216ENST00000638940 BAZ1BQ9UIG0 1483 aaKnown RBP17.27■□□□□ 0.35
SPIN3-216ENST00000638940 HMGXB3Q12766 1538 aa17.2■□□□□ 0.34
SPIN3-216ENST00000638940 ABCC8Q09428 1581 aa17.18■□□□□ 0.34
SPIN3-216ENST00000638940 NCAPD3P42695 1498 aa17.17■□□□□ 0.34
SPIN3-216ENST00000638940 EEA1Q15075 1411 aa17.1■□□□□ 0.33
SPIN3-216ENST00000638940 FAM9AQ8IZU1 332 aaPredicted RBP17.08■□□□□ 0.32
SPIN3-216ENST00000638940 WRNQ14191 1432 aaPredicted RBP eCLIP17.06■□□□□ 0.32
SPIN3-216ENST00000638940 SYNJ1O43426 1573 aa16.98■□□□□ 0.31
SPIN3-216ENST00000638940 PCGF6Q9BYE7 350 aa16.95■□□□□ 0.3
SPIN3-216ENST00000638940 SOGA1O94964 1423 aa16.95■□□□□ 0.3
SPIN3-216ENST00000638940 TRIM26Q12899 539 aaPredicted RBP16.94■□□□□ 0.3
SPIN3-216ENST00000638940 TOP2BQ02880 1626 aa16.93■□□□□ 0.3
SPIN3-216ENST00000638940 BIVM-ERCC5R4GMW8 1640 aa16.92■□□□□ 0.3
SPIN3-216ENST00000638940 PRDM2Q13029 1718 aa16.91■□□□□ 0.3
SPIN3-216ENST00000638940 CFTRP13569 1480 aa16.89■□□□□ 0.29
SPIN3-216ENST00000638940 CSRNP3Q8WYN3 585 aa16.89■□□□□ 0.29
SPIN3-216ENST00000638940 HRCP23327 699 aa16.87■□□□□ 0.29
SPIN3-216ENST00000638940 TNIKQ9UKE5 1360 aa16.87■□□□□ 0.29
SPIN3-216ENST00000638940 KIF21BO75037 1637 aa16.85■□□□□ 0.29
SPIN3-216ENST00000638940 RUSC2Q8N2Y8 1516 aa16.85■□□□□ 0.29
SPIN3-216ENST00000638940 GOLGA3Q08378 1498 aa16.84■□□□□ 0.29
SPIN3-216ENST00000638940 CC2D2AQ9P2K1 1620 aa16.83■□□□□ 0.28
SPIN3-216ENST00000638940 CEP164Q9UPV0 1460 aa16.8■□□□□ 0.28
SPIN3-216ENST00000638940 CEP162Q5TB80 1403 aa16.77■□□□□ 0.27
SPIN3-216ENST00000638940 EHMT2Q96KQ7 1210 aa16.75■□□□□ 0.27
SPIN3-216ENST00000638940 CUX1P39880 1505 aa16.74■□□□□ 0.27
SPIN3-216ENST00000638940 CADPSQ9ULU8 1353 aa16.73■□□□□ 0.27
SPIN3-216ENST00000638940 ERICH3Q5RHP9 1530 aa16.67■□□□□ 0.26
SPIN3-216ENST00000638940 UBTFP17480 764 aaKnown RBP16.65■□□□□ 0.26
SPIN3-216ENST00000638940 PRXQ9BXM0 1461 aa16.62■□□□□ 0.25
SPIN3-216ENST00000638940 KIF27Q86VH2 1401 aa16.6■□□□□ 0.25
SPIN3-216ENST00000638940 RAPGEF2Q9Y4G8 1499 aa16.6■□□□□ 0.25
SPIN3-216ENST00000638940 CLIP1P30622 1438 aa16.55■□□□□ 0.24
SPIN3-216ENST00000638940 FANCD2Q9BXW9 1451 aa16.53■□□□□ 0.24
SPIN3-216ENST00000638940 LAMC3Q9Y6N6 1575 aa16.53■□□□□ 0.24
SPIN3-216ENST00000638940 ZEB1P37275 1124 aaPredicted RBP16.52■□□□□ 0.24
SPIN3-216ENST00000638940 DNMBPQ6XZF7 1577 aa16.5■□□□□ 0.23
SPIN3-216ENST00000638940 VPS8Q8N3P4 1428 aa16.49■□□□□ 0.23
SPIN3-216ENST00000638940 FGD5Q6ZNL6 1462 aa16.48■□□□□ 0.23
SPIN3-216ENST00000638940 CUX2O14529 1486 aa16.44■□□□□ 0.22
SPIN3-216ENST00000638940 TOPBP1Q92547 1522 aa16.41■□□□□ 0.22
SPIN3-216ENST00000638940 IGF1RP08069 1367 aa16.41■□□□□ 0.22
SPIN3-216ENST00000638940 PPARGC1BQ86YN6 1023 aaKnown RBP16.4■□□□□ 0.22
SPIN3-216ENST00000638940 ABCA10Q8WWZ4 1543 aa16.4■□□□□ 0.22
SPIN3-216ENST00000638940 NESP48681 1621 aa16.39■□□□□ 0.21
SPIN3-216ENST00000638940 ARAP1Q96P48 1450 aa16.36■□□□□ 0.21
SPIN3-216ENST00000638940 POLA1P09884 1462 aaPredicted RBP16.35■□□□□ 0.21
SPIN3-216ENST00000638940 PDS5BQ9NTI5 1447 aa16.35■□□□□ 0.21
SPIN3-216ENST00000638940 WDR97A6NE52 1622 aa16.33■□□□□ 0.21
SPIN3-216ENST00000638940 CARMIL1Q5VZK9 1371 aa16.33■□□□□ 0.2
SPIN3-216ENST00000638940 CUL7Q14999 1698 aa16.31■□□□□ 0.2
SPIN3-216ENST00000638940 URB2Q14146 1524 aaKnown RBP16.31■□□□□ 0.2
SPIN3-216ENST00000638940 ARHGAP35Q9NRY4 1499 aa16.28■□□□□ 0.2
SPIN3-216ENST00000638940 APLP2Q06481 763 aa16.27■□□□□ 0.2
SPIN3-216ENST00000638940 RAD54L2Q9Y4B4 1467 aa16.27■□□□□ 0.19
SPIN3-216ENST00000638940 KIF21AQ7Z4S6 1674 aa16.26■□□□□ 0.19
SPIN3-216ENST00000638940 ABCA5Q8WWZ7 1642 aa16.23■□□□□ 0.19
SPIN3-216ENST00000638940 MAP3K1Q13233 1512 aa16.21■□□□□ 0.18
SPIN3-216ENST00000638940 CTTNBP2Q8WZ74 1663 aa16.18■□□□□ 0.18
SPIN3-216ENST00000638940 EFCAB5A4FU69 1503 aa16.16■□□□□ 0.18
SPIN3-216ENST00000638940 DNAJC5BQ9UF47 199 aa16.16■□□□□ 0.18
SPIN3-216ENST00000638940 TARBP1Q13395 1621 aaKnown RBP16.16■□□□□ 0.18
SPIN3-216ENST00000638940 TTBK1Q5TCY1 1321 aaPredicted RBP16.16■□□□□ 0.18
SPIN3-216ENST00000638940 RANGAP1P46060 587 aaPredicted RBP16.15■□□□□ 0.18
SPIN3-216ENST00000638940 PELP1Q8IZL8 1130 aaKnown RBP16.15■□□□□ 0.18
SPIN3-216ENST00000638940 CCER1Q8TC90 406 aaPredicted RBP16.14■□□□□ 0.17
SPIN3-216ENST00000638940 GAPVD1Q14C86 1478 aa16.13■□□□□ 0.17
SPIN3-216ENST00000638940 MRC2Q9UBG0 1479 aa16.12■□□□□ 0.17
SPIN3-216ENST00000638940 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.12■□□□□ 0.17
SPIN3-216ENST00000638940 FHAD1B1AJZ9 1412 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms