RNA–Protein interactions for RNA: ENST00000638237.1

NECAP1-210, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene NECAP1, Length 2,517 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-210ENST00000638237 TOPBP1Q92547 1522 aa12.88□□□□□ -0.35
NECAP1-210ENST00000638237 POLA1P09884 1462 aaPredicted RBP12.87□□□□□ -0.35
NECAP1-210ENST00000638237 P3H3Q8IVL6 736 aa12.84□□□□□ -0.35
NECAP1-210ENST00000638237 URB2Q14146 1524 aaKnown RBP12.81□□□□□ -0.36
NECAP1-210ENST00000638237 ABCA10Q8WWZ4 1543 aa12.8□□□□□ -0.36
NECAP1-210ENST00000638237 KIF21AQ7Z4S6 1674 aa12.8□□□□□ -0.36
NECAP1-210ENST00000638237 LAMC3Q9Y6N6 1575 aa12.8□□□□□ -0.36
NECAP1-210ENST00000638237 ITGAEP38570 1179 aa12.79□□□□□ -0.36
NECAP1-210ENST00000638237 WDR97A6NE52 1622 aa12.77□□□□□ -0.36
NECAP1-210ENST00000638237 PCF11O94913 1555 aaKnown RBP12.77□□□□□ -0.37
NECAP1-210ENST00000638237 TIAM1Q13009 1591 aa12.77□□□□□ -0.37
NECAP1-210ENST00000638237 MIER1Q8N108 512 aa12.76□□□□□ -0.37
NECAP1-210ENST00000638237 ATP1B4Q9UN42 357 aaPredicted RBP12.76□□□□□ -0.37
NECAP1-210ENST00000638237 FHOD3Q2V2M9 1422 aa12.76□□□□□ -0.37
NECAP1-210ENST00000638237 RRBP1Q9P2E9 1410 aaKnown RBP12.76□□□□□ -0.37
NECAP1-210ENST00000638237 TDRD9Q8NDG6 1382 aaKnown RBP12.75□□□□□ -0.37
NECAP1-210ENST00000638237 CTTNBP2Q8WZ74 1663 aa12.75□□□□□ -0.37
NECAP1-210ENST00000638237 YTHDC1Q96MU7 727 aaKnown RBP12.75□□□□□ -0.37
NECAP1-210ENST00000638237 CCNB3Q8WWL7 1395 aa12.74□□□□□ -0.37
NECAP1-210ENST00000638237 CUL7Q14999 1698 aa12.73□□□□□ -0.37
NECAP1-210ENST00000638237 DHX57Q6P158 1386 aaKnown RBP12.72□□□□□ -0.37
NECAP1-210ENST00000638237 ABCA5Q8WWZ7 1642 aa12.7□□□□□ -0.38
NECAP1-210ENST00000638237 LRRC9Q6ZRR7 1453 aa12.7□□□□□ -0.38
NECAP1-210ENST00000638237 CFAP43Q8NDM7 1665 aa12.7□□□□□ -0.38
NECAP1-210ENST00000638237 PDS5BQ9NTI5 1447 aa12.69□□□□□ -0.38
NECAP1-210ENST00000638237 PHLDB1Q86UU1 1377 aa12.69□□□□□ -0.38
NECAP1-210ENST00000638237 FHAD1B1AJZ9 1412 aa12.68□□□□□ -0.38
NECAP1-210ENST00000638237 GAPVD1Q14C86 1478 aa12.68□□□□□ -0.38
NECAP1-210ENST00000638237 CLSPNQ9HAW4 1339 aa12.65□□□□□ -0.38
NECAP1-210ENST00000638237 MAP3K1Q13233 1512 aa12.65□□□□□ -0.38
NECAP1-210ENST00000638237 LRRIQ1Q96JM4 1722 aa12.64□□□□□ -0.39
NECAP1-210ENST00000638237 EFCAB5A4FU69 1503 aa12.64□□□□□ -0.39
NECAP1-210ENST00000638237 FAM50AQ14320 339 aaKnown RBP12.64□□□□□ -0.39
NECAP1-210ENST00000638237 TARBP1Q13395 1621 aaKnown RBP12.64□□□□□ -0.39
NECAP1-210ENST00000638237 RAB3GAP2Q9H2M9 1393 aa12.62□□□□□ -0.39
NECAP1-210ENST00000638237 FYCO1Q9BQS8 1478 aa12.62□□□□□ -0.39
NECAP1-210ENST00000638237 PBRM1Q86U86 1689 aa12.61□□□□□ -0.39
NECAP1-210ENST00000638237 SNAPC4Q5SXM2 1469 aa12.6□□□□□ -0.39
NECAP1-210ENST00000638237 CASKIN1Q8WXD9 1431 aa12.6□□□□□ -0.39
NECAP1-210ENST00000638237 AQRO60306 1485 aaKnown RBP eCLIP12.59□□□□□ -0.396e-7■■■■■ 30.6
NECAP1-210ENST00000638237 SAMD9Q5K651 1589 aa12.59□□□□□ -0.39
NECAP1-210ENST00000638237 MAPKBP1O60336 1514 aa12.56□□□□□ -0.4
NECAP1-210ENST00000638237 FMN1Q68DA7 1419 aa12.56□□□□□ -0.4
NECAP1-210ENST00000638237 SETD5Q9C0A6 1442 aa12.53□□□□□ -0.4
NECAP1-210ENST00000638237 MRC2Q9UBG0 1479 aa12.53□□□□□ -0.4
NECAP1-210ENST00000638237 ZNF608Q9ULD9 1512 aaPredicted RBP12.53□□□□□ -0.4
NECAP1-210ENST00000638237 MTUS2Q5JR59 1369 aa12.53□□□□□ -0.4
NECAP1-210ENST00000638237 ADAMTS12P58397 1594 aa12.52□□□□□ -0.41
NECAP1-210ENST00000638237 ARID3CA6NKF2 412 aa12.51□□□□□ -0.41
NECAP1-210ENST00000638237 GRIN2BQ13224 1484 aa12.51□□□□□ -0.41
NECAP1-210ENST00000638237 FGD6Q6ZV73 1430 aa12.5□□□□□ -0.41
NECAP1-210ENST00000638237 SIN3AQ96ST3 1273 aa12.49□□□□□ -0.41
NECAP1-210ENST00000638237 IQGAP2Q13576 1575 aa12.49□□□□□ -0.41
NECAP1-210ENST00000638237 MAGI3Q5TCQ9 1506 aa12.49□□□□□ -0.41
NECAP1-210ENST00000638237 SUPT16HQ9Y5B9 1047 aaKnown RBP12.48□□□□□ -0.41
NECAP1-210ENST00000638237 NCOA2Q15596 1464 aa12.47□□□□□ -0.41
NECAP1-210ENST00000638237 SUPT6HQ7KZ85 1726 aaKnown RBP12.46□□□□□ -0.41
NECAP1-210ENST00000638237 PTPRKQ15262 1439 aa12.46□□□□□ -0.41
NECAP1-210ENST00000638237 CDK13Q14004 1512 aaKnown RBP12.45□□□□□ -0.42
NECAP1-210ENST00000638237 WDR62O43379 1518 aa12.44□□□□□ -0.42
NECAP1-210ENST00000638237 EIF4G3O43432 1585 aaKnown RBP12.43□□□□□ -0.42
NECAP1-210ENST00000638237 THOC2Q8NI27 1593 aaKnown RBP12.43□□□□□ -0.42
NECAP1-210ENST00000638237 EHBP1L1Q8N3D4 1523 aa12.43□□□□□ -0.42
NECAP1-210ENST00000638237 MYOM3Q5VTT5 1437 aa12.42□□□□□ -0.42
NECAP1-210ENST00000638237 HECW1Q76N89 1606 aa12.42□□□□□ -0.42
NECAP1-210ENST00000638237 ERCC6Q03468 1493 aa12.41□□□□□ -0.42
NECAP1-210ENST00000638237 CCDC18Q5T9S5 1454 aa12.41□□□□□ -0.42
NECAP1-210ENST00000638237 IFT140Q96RY7 1462 aa12.41□□□□□ -0.42
NECAP1-210ENST00000638237 PTPN23Q9H3S7 1636 aa12.41□□□□□ -0.42
NECAP1-210ENST00000638237 UGGT2Q9NYU1 1516 aa12.4□□□□□ -0.42
NECAP1-210ENST00000638237 EPRSP07814 1512 aaKnown RBP12.4□□□□□ -0.42
NECAP1-210ENST00000638237 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.39□□□□□ -0.43
NECAP1-210ENST00000638237 CHIC2Q9UKJ5 165 aa12.38□□□□□ -0.43
NECAP1-210ENST00000638237 PIAS4Q8N2W9 510 aaPredicted RBP12.37□□□□□ -0.43
NECAP1-210ENST00000638237 HIRIP3Q9BW71 556 aaPredicted RBP12.37□□□□□ -0.43
NECAP1-210ENST00000638237 ARHGEF11O15085 1522 aa12.37□□□□□ -0.43
NECAP1-210ENST00000638237 HFM1A2PYH4 1435 aa12.37□□□□□ -0.43
NECAP1-210ENST00000638237 KIAA0556O60303 1618 aa12.37□□□□□ -0.43
NECAP1-210ENST00000638237 NAIPQ13075 1403 aa12.36□□□□□ -0.43
NECAP1-210ENST00000638237 RRP7BPQ9NSQ0 103 aa12.36□□□□□ -0.43
NECAP1-210ENST00000638237 DISP1Q96F81 1524 aa12.36□□□□□ -0.43
NECAP1-210ENST00000638237 GRIN2AQ12879 1464 aa12.36□□□□□ -0.43
NECAP1-210ENST00000638237 FBLN2P98095 1184 aa12.35□□□□□ -0.43
NECAP1-210ENST00000638237 TSHZ2Q9NRE2 1034 aa12.35□□□□□ -0.43
NECAP1-210ENST00000638237 KDM6BO15054 1643 aa12.33□□□□□ -0.44
NECAP1-210ENST00000638237 KIAA0586Q9BVV6 1533 aa12.33□□□□□ -0.44
NECAP1-210ENST00000638237 CEP170Q5SW79 1584 aa12.32□□□□□ -0.44
NECAP1-210ENST00000638237 UACAQ9BZF9 1416 aa12.32□□□□□ -0.44
NECAP1-210ENST00000638237 NUP153P49790 1475 aaKnown RBP12.3□□□□□ -0.44
NECAP1-210ENST00000638237 RAPGEF6Q8TEU7 1601 aa12.3□□□□□ -0.44
NECAP1-210ENST00000638237 GCC2Q8IWJ2 1684 aa12.3□□□□□ -0.44
NECAP1-210ENST00000638237 CHMP7Q8WUX9 453 aaPredicted RBP12.3□□□□□ -0.44
NECAP1-210ENST00000638237 KCNH8Q96L42 1107 aa12.3□□□□□ -0.44
NECAP1-210ENST00000638237 TCOF1Q13428 1488 aaKnown RBP12.28□□□□□ -0.44
NECAP1-210ENST00000638237 DDX10Q13206 875 aaKnown RBP12.28□□□□□ -0.44
NECAP1-210ENST00000638237 ZNF644Q9H582 1327 aaPredicted RBP12.28□□□□□ -0.44
NECAP1-210ENST00000638237 TONSLQ96HA7 1378 aa12.28□□□□□ -0.44
NECAP1-210ENST00000638237 PPP1R15AO75807 674 aaPredicted RBP12.28□□□□□ -0.44
NECAP1-210ENST00000638237 PLB1Q6P1J6 1458 aa12.27□□□□□ -0.44
NECAP1-210ENST00000638237 MAGI1Q96QZ7 1491 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms