RNA–Protein interactions for RNA: ENST00000638237.1

NECAP1-210, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene NECAP1, Length 2,517 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-210ENST00000638237 NISCHQ9Y2I1 1504 aa18.21■□□□□ 0.51
NECAP1-210ENST00000638237 AEBP2Q6ZN18 517 aaPredicted RBP16.61■□□□□ 0.25
NECAP1-210ENST00000638237 CHIC1Q5VXU3 224 aa15.61■□□□□ 0.09
NECAP1-210ENST00000638237 CCDC180Q9P1Z9 1646 aa15.56■□□□□ 0.08
NECAP1-210ENST00000638237 SHROOM4Q9ULL8 1493 aa15.53■□□□□ 0.08
NECAP1-210ENST00000638237 ZCCHC6Q5VYS8 1495 aaKnown RBP15.38■□□□□ 0.05
NECAP1-210ENST00000638237 DCAF8L2P0C7V8 631 aa15.22■□□□□ 0.03
NECAP1-210ENST00000638237 SUPT5HO00267 1087 aaKnown RBP15.12■□□□□ 0.01
NECAP1-210ENST00000638237 DCAF1Q9Y4B6 1507 aa14.87□□□□□ -0.03
NECAP1-210ENST00000638237 SCRIBQ14160 1630 aa14.65□□□□□ -0.06
NECAP1-210ENST00000638237 ABCC9O60706 1549 aa14.62□□□□□ -0.07
NECAP1-210ENST00000638237 MYO15BQ96JP2 1530 aa14.56□□□□□ -0.08
NECAP1-210ENST00000638237 SENP3Q9H4L4 574 aaPredicted RBP14.41□□□□□ -0.1
NECAP1-210ENST00000638237 NACADO15069 1562 aa14.39□□□□□ -0.11
NECAP1-210ENST00000638237 RSF1Q96T23 1441 aaPredicted RBP14.36□□□□□ -0.11
NECAP1-210ENST00000638237 HRCP23327 699 aa14.35□□□□□ -0.11
NECAP1-210ENST00000638237 RB1CC1Q8TDY2 1594 aa14.28□□□□□ -0.12
NECAP1-210ENST00000638237 CECR2Q9BXF3 1484 aa14.27□□□□□ -0.12
NECAP1-210ENST00000638237 MROH2BQ7Z745 1585 aa14.2□□□□□ -0.14
NECAP1-210ENST00000638237 LOC105371045A0A1W2PR82 267 aa14.18□□□□□ -0.14
NECAP1-210ENST00000638237 WIZO95785 1651 aa14.16□□□□□ -0.14
NECAP1-210ENST00000638237 UNC13AQ9UPW8 1703 aa14.16□□□□□ -0.14
NECAP1-210ENST00000638237 PCGF6Q9BYE7 350 aa14.13□□□□□ -0.15
NECAP1-210ENST00000638237 POTEDQ86YR6 584 aa14.09□□□□□ -0.15
NECAP1-210ENST00000638237 PHF23Q9BUL5 403 aaPredicted RBP14.04□□□□□ -0.16
NECAP1-210ENST00000638237 TRIM41Q8WV44 630 aa14.03□□□□□ -0.16
NECAP1-210ENST00000638237 FAM9AQ8IZU1 332 aaPredicted RBP14□□□□□ -0.17
NECAP1-210ENST00000638237 BAZ1AQ9NRL2 1556 aaPredicted RBP14□□□□□ -0.17
NECAP1-210ENST00000638237 PPARGC1BQ86YN6 1023 aaKnown RBP13.96□□□□□ -0.18
NECAP1-210ENST00000638237 EHMT2Q96KQ7 1210 aa13.96□□□□□ -0.18
NECAP1-210ENST00000638237 PABPN1Q86U42 306 aaKnown RBP eCLIP13.95□□□□□ -0.18
NECAP1-210ENST00000638237 SMARCA4P51532 1647 aa13.94□□□□□ -0.18
NECAP1-210ENST00000638237 BICRAQ9NZM4 1560 aa13.89□□□□□ -0.19
NECAP1-210ENST00000638237 EIF4G1Q04637 1599 aaKnown RBP13.86□□□□□ -0.19
NECAP1-210ENST00000638237 TOP2AP11388 1531 aaKnown RBP13.85□□□□□ -0.19
NECAP1-210ENST00000638237 TRIM26Q12899 539 aaPredicted RBP13.84□□□□□ -0.19
NECAP1-210ENST00000638237 SMARCA2P51531 1590 aa13.8□□□□□ -0.2
NECAP1-210ENST00000638237 ABCC8Q09428 1581 aa13.8□□□□□ -0.2
NECAP1-210ENST00000638237 CCDC88BA6NC98 1476 aa13.8□□□□□ -0.2
NECAP1-210ENST00000638237 ZEB1P37275 1124 aaPredicted RBP13.67□□□□□ -0.22
NECAP1-210ENST00000638237 PEG3Q9GZU2 1588 aa13.62□□□□□ -0.23
NECAP1-210ENST00000638237 SOGA1O94964 1423 aa13.59□□□□□ -0.23
NECAP1-210ENST00000638237 ATAD2BQ9ULI0 1458 aa13.58□□□□□ -0.23
NECAP1-210ENST00000638237 RUSC2Q8N2Y8 1516 aa13.56□□□□□ -0.24
NECAP1-210ENST00000638237 BAZ1BQ9UIG0 1483 aaKnown RBP13.56□□□□□ -0.24
NECAP1-210ENST00000638237 SYNJ1O43426 1573 aa13.5□□□□□ -0.25
NECAP1-210ENST00000638237 WRNQ14191 1432 aaPredicted RBP eCLIP13.5□□□□□ -0.25
NECAP1-210ENST00000638237 PELP1Q8IZL8 1130 aaKnown RBP13.48□□□□□ -0.25
NECAP1-210ENST00000638237 FOXD1Q16676 465 aa13.46□□□□□ -0.25
NECAP1-210ENST00000638237 TTBK1Q5TCY1 1321 aaPredicted RBP13.46□□□□□ -0.25
NECAP1-210ENST00000638237 CEP162Q5TB80 1403 aa13.43□□□□□ -0.26
NECAP1-210ENST00000638237 CSRNP3Q8WYN3 585 aa13.42□□□□□ -0.26
NECAP1-210ENST00000638237 UBTFP17480 764 aaKnown RBP13.41□□□□□ -0.26
NECAP1-210ENST00000638237 SCAF1Q9H7N4 1312 aaKnown RBP13.37□□□□□ -0.27
NECAP1-210ENST00000638237 EEA1Q15075 1411 aa13.37□□□□□ -0.27
NECAP1-210ENST00000638237 TNIKQ9UKE5 1360 aa13.35□□□□□ -0.27
NECAP1-210ENST00000638237 GOLGA3Q08378 1498 aa13.34□□□□□ -0.27
NECAP1-210ENST00000638237 HMGXB3Q12766 1538 aa13.32□□□□□ -0.28
NECAP1-210ENST00000638237 NCAPD3P42695 1498 aa13.3□□□□□ -0.28
NECAP1-210ENST00000638237 TOP2BQ02880 1626 aa13.3□□□□□ -0.28
NECAP1-210ENST00000638237 RANGAP1P46060 587 aaPredicted RBP13.28□□□□□ -0.28
NECAP1-210ENST00000638237 CEP164Q9UPV0 1460 aa13.27□□□□□ -0.28
NECAP1-210ENST00000638237 KIF21BO75037 1637 aa13.27□□□□□ -0.28
NECAP1-210ENST00000638237 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.27□□□□□ -0.29
NECAP1-210ENST00000638237 RAPGEF2Q9Y4G8 1499 aa13.26□□□□□ -0.29
NECAP1-210ENST00000638237 BIVM-ERCC5R4GMW8 1640 aa13.26□□□□□ -0.29
NECAP1-210ENST00000638237 CUX1P39880 1505 aa13.22□□□□□ -0.29
NECAP1-210ENST00000638237 CLIP1P30622 1438 aa13.2□□□□□ -0.3
NECAP1-210ENST00000638237 CCER1Q8TC90 406 aaPredicted RBP13.18□□□□□ -0.3
NECAP1-210ENST00000638237 CFTRP13569 1480 aa13.18□□□□□ -0.3
NECAP1-210ENST00000638237 ACIN1Q9UKV3 1341 aaKnown RBP13.17□□□□□ -0.3
NECAP1-210ENST00000638237 PRDM2Q13029 1718 aa13.16□□□□□ -0.3
NECAP1-210ENST00000638237 CC2D2AQ9P2K1 1620 aa13.15□□□□□ -0.3
NECAP1-210ENST00000638237 NEUROD1Q13562 356 aa13.11□□□□□ -0.31
NECAP1-210ENST00000638237 VPS8Q8N3P4 1428 aa13.11□□□□□ -0.31
NECAP1-210ENST00000638237 PRXQ9BXM0 1461 aa13.09□□□□□ -0.31
NECAP1-210ENST00000638237 DIEXFQ68CQ4 756 aaKnown RBP13.09□□□□□ -0.31
NECAP1-210ENST00000638237 ERICH3Q5RHP9 1530 aa13.07□□□□□ -0.32
NECAP1-210ENST00000638237 CENPBP07199 599 aaPredicted RBP13.06□□□□□ -0.32
NECAP1-210ENST00000638237 KIF27Q86VH2 1401 aa13.06□□□□□ -0.32
NECAP1-210ENST00000638237 CADPSQ9ULU8 1353 aa13.05□□□□□ -0.32
NECAP1-210ENST00000638237 HNRNPUL2Q1KMD3 747 aaKnown RBP13.05□□□□□ -0.32
NECAP1-210ENST00000638237 MSH5O43196 834 aa13.03□□□□□ -0.32
NECAP1-210ENST00000638237 ARAP1Q96P48 1450 aa13.02□□□□□ -0.32
NECAP1-210ENST00000638237 CUX2O14529 1486 aa13.02□□□□□ -0.33
NECAP1-210ENST00000638237 APLP2Q06481 763 aa13.01□□□□□ -0.33
NECAP1-210ENST00000638237 GTF3C3Q9Y5Q9 886 aa13.01□□□□□ -0.33
NECAP1-210ENST00000638237 FGD5Q6ZNL6 1462 aa13.01□□□□□ -0.33
NECAP1-210ENST00000638237 NESP48681 1621 aa13□□□□□ -0.33
NECAP1-210ENST00000638237 SLC24A1O60721 1099 aa12.99□□□□□ -0.33
NECAP1-210ENST00000638237 FANCD2Q9BXW9 1451 aa12.97□□□□□ -0.33
NECAP1-210ENST00000638237 KANK4Q5T7N3 995 aaPredicted RBP12.95□□□□□ -0.34
NECAP1-210ENST00000638237 IGF1RP08069 1367 aa12.94□□□□□ -0.34
NECAP1-210ENST00000638237 ARHGAP35Q9NRY4 1499 aa12.94□□□□□ -0.34
NECAP1-210ENST00000638237 DNAJC5BQ9UF47 199 aa12.94□□□□□ -0.34
NECAP1-210ENST00000638237 ZNF316A6NFI3 1004 aaPredicted RBP12.93□□□□□ -0.34
NECAP1-210ENST00000638237 RAD54L2Q9Y4B4 1467 aa12.92□□□□□ -0.34
NECAP1-210ENST00000638237 MYT1Q01538 1121 aa12.9□□□□□ -0.34
NECAP1-210ENST00000638237 CARMIL1Q5VZK9 1371 aa12.89□□□□□ -0.35
NECAP1-210ENST00000638237 DNMBPQ6XZF7 1577 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms