RNA–Protein interactions for RNA: ENST00000637815.1

CTSD-212, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 2,003 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-212ENST00000637815 TARBP1Q13395 1621 aaKnown RBP27.78■■■□□ 2.04
CTSD-212ENST00000637815 CFAP43Q8NDM7 1665 aa27.77■■■□□ 2.04
CTSD-212ENST00000637815 GAPVD1Q14C86 1478 aa27.77■■■□□ 2.04
CTSD-212ENST00000637815 PCF11O94913 1555 aaKnown RBP27.75■■■□□ 2.03
CTSD-212ENST00000637815 TDRD9Q8NDG6 1382 aaKnown RBP27.72■■■□□ 2.03
CTSD-212ENST00000637815 LRRC9Q6ZRR7 1453 aa27.69■■■□□ 2.02
CTSD-212ENST00000637815 CCNB3Q8WWL7 1395 aa27.68■■■□□ 2.02
CTSD-212ENST00000637815 AQRO60306 1485 aaKnown RBP eCLIP27.67■■■□□ 2.021e-6■■■■■ 31.1
CTSD-212ENST00000637815 FYCO1Q9BQS8 1478 aa27.67■■■□□ 2.02
CTSD-212ENST00000637815 FHOD3Q2V2M9 1422 aa27.65■■■□□ 2.02
CTSD-212ENST00000637815 PBRM1Q86U86 1689 aa27.63■■■□□ 2.01
CTSD-212ENST00000637815 MRC2Q9UBG0 1479 aa27.63■■■□□ 2.01
CTSD-212ENST00000637815 SAMD9Q5K651 1589 aa27.63■■■□□ 2.01
CTSD-212ENST00000637815 CASKIN1Q8WXD9 1431 aa27.61■■■□□ 2.01
CTSD-212ENST00000637815 P3H3Q8IVL6 736 aa27.57■■■□□ 2
CTSD-212ENST00000637815 CLSPNQ9HAW4 1339 aa27.57■■■□□ 2
CTSD-212ENST00000637815 FMN1Q68DA7 1419 aa27.55■■■□□ 2
CTSD-212ENST00000637815 DHX57Q6P158 1386 aaKnown RBP27.54■■■□□ 2
CTSD-212ENST00000637815 SNAPC4Q5SXM2 1469 aa27.52■■■□□ 2
CTSD-212ENST00000637815 PHLDB1Q86UU1 1377 aa27.49■■□□□ 1.99
CTSD-212ENST00000637815 ADAMTS12P58397 1594 aa27.48■■□□□ 1.99
CTSD-212ENST00000637815 WDR62O43379 1518 aa27.48■■□□□ 1.99
CTSD-212ENST00000637815 LRRIQ1Q96JM4 1722 aa27.44■■□□□ 1.98
CTSD-212ENST00000637815 ZNF316A6NFI3 1004 aaPredicted RBP27.43■■□□□ 1.98
CTSD-212ENST00000637815 DIEXFQ68CQ4 756 aaKnown RBP27.43■■□□□ 1.98
CTSD-212ENST00000637815 THOC2Q8NI27 1593 aaKnown RBP27.43■■□□□ 1.98
CTSD-212ENST00000637815 IFT140Q96RY7 1462 aa27.41■■□□□ 1.98
CTSD-212ENST00000637815 GRIN2BQ13224 1484 aa27.4■■□□□ 1.98
CTSD-212ENST00000637815 ATP1B4Q9UN42 357 aaPredicted RBP27.37■■□□□ 1.97
CTSD-212ENST00000637815 IQGAP2Q13576 1575 aa27.36■■□□□ 1.97
CTSD-212ENST00000637815 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.34■■□□□ 1.973e-7■■■□□ 14.6
CTSD-212ENST00000637815 RAB3GAP2Q9H2M9 1393 aa27.31■■□□□ 1.96
CTSD-212ENST00000637815 ITGAEP38570 1179 aa27.31■■□□□ 1.96
CTSD-212ENST00000637815 ZNF608Q9ULD9 1512 aaPredicted RBP27.29■■□□□ 1.96
CTSD-212ENST00000637815 SETD5Q9C0A6 1442 aa27.28■■□□□ 1.96
CTSD-212ENST00000637815 EIF4G3O43432 1585 aaKnown RBP27.24■■□□□ 1.95
CTSD-212ENST00000637815 EHBP1L1Q8N3D4 1523 aa27.24■■□□□ 1.95
CTSD-212ENST00000637815 MTUS2Q5JR59 1369 aa27.24■■□□□ 1.95
CTSD-212ENST00000637815 FAM50AQ14320 339 aaKnown RBP27.23■■□□□ 1.95
CTSD-212ENST00000637815 SUPT6HQ7KZ85 1726 aaKnown RBP27.23■■□□□ 1.95
CTSD-212ENST00000637815 FGD6Q6ZV73 1430 aa27.23■■□□□ 1.95
CTSD-212ENST00000637815 UGGT2Q9NYU1 1516 aa27.23■■□□□ 1.95
CTSD-212ENST00000637815 CCDC18Q5T9S5 1454 aa27.22■■□□□ 1.95
CTSD-212ENST00000637815 HECW1Q76N89 1606 aa27.22■■□□□ 1.95
CTSD-212ENST00000637815 MAPKBP1O60336 1514 aa27.2■■□□□ 1.94
CTSD-212ENST00000637815 ERCC6Q03468 1493 aa27.19■■□□□ 1.94
CTSD-212ENST00000637815 NCOA2Q15596 1464 aa27.17■■□□□ 1.94
CTSD-212ENST00000637815 ARHGEF11O15085 1522 aa27.15■■□□□ 1.94
CTSD-212ENST00000637815 KIAA0586Q9BVV6 1533 aa27.13■■□□□ 1.93
CTSD-212ENST00000637815 MAGI3Q5TCQ9 1506 aa27.13■■□□□ 1.93
CTSD-212ENST00000637815 MYOM3Q5VTT5 1437 aa27.13■■□□□ 1.93
CTSD-212ENST00000637815 GRIN2AQ12879 1464 aa27.11■■□□□ 1.93
CTSD-212ENST00000637815 EPRSP07814 1512 aaKnown RBP27.08■■□□□ 1.93
CTSD-212ENST00000637815 KIAA0556O60303 1618 aa27.08■■□□□ 1.93
CTSD-212ENST00000637815 MAGI1Q96QZ7 1491 aaPredicted RBP27.08■■□□□ 1.93
CTSD-212ENST00000637815 DISP1Q96F81 1524 aa27.05■■□□□ 1.92
CTSD-212ENST00000637815 PTPN23Q9H3S7 1636 aa27.04■■□□□ 1.92
CTSD-212ENST00000637815 HFM1A2PYH4 1435 aa26.99■■□□□ 1.91
CTSD-212ENST00000637815 PTPRKQ15262 1439 aa26.99■■□□□ 1.91
CTSD-212ENST00000637815 CDK13Q14004 1512 aaKnown RBP26.99■■□□□ 1.91
CTSD-212ENST00000637815 SYNJ2O15056 1496 aa26.98■■□□□ 1.91
CTSD-212ENST00000637815 TCOF1Q13428 1488 aaKnown RBP26.98■■□□□ 1.91
CTSD-212ENST00000637815 CEP170Q5SW79 1584 aa26.95■■□□□ 1.91
CTSD-212ENST00000637815 RAPGEF6Q8TEU7 1601 aa26.93■■□□□ 1.9
CTSD-212ENST00000637815 NAIPQ13075 1403 aa26.89■■□□□ 1.9
CTSD-212ENST00000637815 ACIN1Q9UKV3 1341 aaKnown RBP26.89■■□□□ 1.89
CTSD-212ENST00000637815 MIA2Q96PC5 1412 aa26.88■■□□□ 1.89
CTSD-212ENST00000637815 MIER1Q8N108 512 aa26.88■■□□□ 1.89
CTSD-212ENST00000637815 SCAF1Q9H7N4 1312 aaKnown RBP26.88■■□□□ 1.89
CTSD-212ENST00000637815 NUP153P49790 1475 aaKnown RBP26.88■■□□□ 1.89
CTSD-212ENST00000637815 GCC2Q8IWJ2 1684 aa26.86■■□□□ 1.89
CTSD-212ENST00000637815 NUP160Q12769 1436 aa26.86■■□□□ 1.89
CTSD-212ENST00000637815 UACAQ9BZF9 1416 aa26.86■■□□□ 1.89
CTSD-212ENST00000637815 CENPBP07199 599 aaPredicted RBP26.85■■□□□ 1.89
CTSD-212ENST00000637815 TIMELESSQ9UNS1 1208 aa26.85■■□□□ 1.89
CTSD-212ENST00000637815 CHMP7Q8WUX9 453 aaPredicted RBP26.83■■□□□ 1.89
CTSD-212ENST00000637815 NEUROD1Q13562 356 aa26.83■■□□□ 1.89
CTSD-212ENST00000637815 AKNAQ7Z591 1439 aa26.82■■□□□ 1.88
CTSD-212ENST00000637815 SIN3AQ96ST3 1273 aa26.8■■□□□ 1.88
CTSD-212ENST00000637815 CARMIL2Q6F5E8 1435 aa26.73■■□□□ 1.87
CTSD-212ENST00000637815 ARID3CA6NKF2 412 aa26.72■■□□□ 1.87
CTSD-212ENST00000637815 ADCY10Q96PN6 1610 aa26.69■■□□□ 1.86
CTSD-212ENST00000637815 DNMT1P26358 1616 aaKnown RBP26.69■■□□□ 1.86
CTSD-212ENST00000637815 PLB1Q6P1J6 1458 aa26.68■■□□□ 1.86
CTSD-212ENST00000637815 CDK11AQ9UQ88 783 aaPredicted RBP26.68■■□□□ 1.86
CTSD-212ENST00000637815 FBLN2P98095 1184 aa26.68■■□□□ 1.86
CTSD-212ENST00000637815 TROQ12816 1431 aaPredicted RBP26.67■■□□□ 1.86
CTSD-212ENST00000637815 JPH4Q96JJ6 628 aa26.66■■□□□ 1.86
CTSD-212ENST00000637815 ITSN2Q9NZM3 1697 aa26.65■■□□□ 1.86
CTSD-212ENST00000637815 KDM6BO15054 1643 aa26.64■■□□□ 1.86
CTSD-212ENST00000637815 PPP1R15AO75807 674 aaPredicted RBP26.63■■□□□ 1.85
CTSD-212ENST00000637815 DAPK1P53355 1430 aa26.62■■□□□ 1.85
CTSD-212ENST00000637815 RRP7BPQ9NSQ0 103 aa26.62■■□□□ 1.85
CTSD-212ENST00000637815 ROCK1Q13464 1354 aa26.62■■□□□ 1.85
CTSD-212ENST00000637815 ABCA8O94911 1581 aa26.62■■□□□ 1.85
CTSD-212ENST00000637815 CHIC2Q9UKJ5 165 aa26.6■■□□□ 1.85
CTSD-212ENST00000637815 PRG4Q92954 1404 aaPredicted RBP26.6■■□□□ 1.85
CTSD-212ENST00000637815 KIF14Q15058 1648 aa26.58■■□□□ 1.85
CTSD-212ENST00000637815 TONSLQ96HA7 1378 aa26.58■■□□□ 1.84
CTSD-212ENST00000637815 DENND4BO75064 1496 aaPredicted RBP26.58■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms