RNA–Protein interactions for RNA: ENST00000637419.1

GSE1-216, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 5

Gene GSE1, Length 2,683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-216ENST00000637419 WDR97A6NE52 1622 aa28.64■■■□□ 2.17
GSE1-216ENST00000637419 FAM50AQ14320 339 aaKnown RBP28.61■■■□□ 2.17
GSE1-216ENST00000637419 BCANQ96GW7 911 aa28.61■■■□□ 2.17
GSE1-216ENST00000637419 LRRC9Q6ZRR7 1453 aa28.61■■■□□ 2.17
GSE1-216ENST00000637419 MAP3K1Q13233 1512 aa28.57■■■□□ 2.16
GSE1-216ENST00000637419 CARMIL1Q5VZK9 1371 aa28.56■■■□□ 2.16
GSE1-216ENST00000637419 HIRIP3Q9BW71 556 aaPredicted RBP28.55■■■□□ 2.16
GSE1-216ENST00000637419 P3H3Q8IVL6 736 aa28.54■■■□□ 2.16
GSE1-216ENST00000637419 PPP1R15AO75807 674 aaPredicted RBP28.5■■■□□ 2.15
GSE1-216ENST00000637419 FKBP8Q14318 412 aa28.5■■■□□ 2.15
GSE1-216ENST00000637419 ATP1B4Q9UN42 357 aaPredicted RBP28.49■■■□□ 2.15
GSE1-216ENST00000637419 FGD5Q6ZNL6 1462 aa28.44■■■□□ 2.14
GSE1-216ENST00000637419 PCF11O94913 1555 aaKnown RBP28.42■■■□□ 2.14
GSE1-216ENST00000637419 FHAD1B1AJZ9 1412 aa28.39■■■□□ 2.14
GSE1-216ENST00000637419 PRDM2Q13029 1718 aa28.39■■■□□ 2.13
GSE1-216ENST00000637419 CFAP43Q8NDM7 1665 aa28.38■■■□□ 2.13
GSE1-216ENST00000637419 ANP32EQ9BTT0 268 aa28.37■■■□□ 2.13
GSE1-216ENST00000637419 TRIM52Q96A61 297 aa28.37■■■□□ 2.13
GSE1-216ENST00000637419 FHOD3Q2V2M9 1422 aa28.34■■■□□ 2.13
GSE1-216ENST00000637419 CADPSQ9ULU8 1353 aa28.33■■■□□ 2.13
GSE1-216ENST00000637419 TIMELESSQ9UNS1 1208 aa28.33■■■□□ 2.13
GSE1-216ENST00000637419 ANP32CO43423 234 aa28.27■■■□□ 2.12
GSE1-216ENST00000637419 CCER2I3L3R5 266 aa28.26■■■□□ 2.11
GSE1-216ENST00000637419 NEFLP07196 543 aa28.21■■■□□ 2.11
GSE1-216ENST00000637419 FYCO1Q9BQS8 1478 aa28.19■■■□□ 2.1
GSE1-216ENST00000637419 CASKIN1Q8WXD9 1431 aa28.18■■■□□ 2.1
GSE1-216ENST00000637419 RAD54L2Q9Y4B4 1467 aa28.17■■■□□ 2.1
GSE1-216ENST00000637419 TONSLQ96HA7 1378 aa28.17■■■□□ 2.1
GSE1-216ENST00000637419 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.16■■■□□ 2.17e-7■■■■□ 20.5
GSE1-216ENST00000637419 RBM19Q9Y4C8 960 aaKnown RBP28.15■■■□□ 2.1
GSE1-216ENST00000637419 FGD6Q6ZV73 1430 aa28.14■■■□□ 2.1
GSE1-216ENST00000637419 PTPRKQ15262 1439 aa28.14■■■□□ 2.09
GSE1-216ENST00000637419 CCDC18Q5T9S5 1454 aa28.12■■■□□ 2.09
GSE1-216ENST00000637419 FANCD2Q9BXW9 1451 aa28.09■■■□□ 2.09
GSE1-216ENST00000637419 AQRO60306 1485 aaKnown RBP eCLIP28.08■■■□□ 2.09
GSE1-216ENST00000637419 EFCAB5A4FU69 1503 aa28.08■■■□□ 2.09
GSE1-216ENST00000637419 UACAQ9BZF9 1416 aa28.04■■■□□ 2.08
GSE1-216ENST00000637419 HFM1A2PYH4 1435 aa28.03■■■□□ 2.08
GSE1-216ENST00000637419 ABCA10Q8WWZ4 1543 aa28.03■■■□□ 2.08
GSE1-216ENST00000637419 MTUS2Q5JR59 1369 aa28.03■■■□□ 2.08
GSE1-216ENST00000637419 POLA1P09884 1462 aaPredicted RBP28.01■■■□□ 2.07
GSE1-216ENST00000637419 SNAPC4Q5SXM2 1469 aa28.01■■■□□ 2.07
GSE1-216ENST00000637419 PTPN23Q9H3S7 1636 aa28.01■■■□□ 2.07
GSE1-216ENST00000637419 FMN1Q68DA7 1419 aa27.98■■■□□ 2.07
GSE1-216ENST00000637419 NAIPQ13075 1403 aa27.98■■■□□ 2.07
GSE1-216ENST00000637419 CTTNBP2Q8WZ74 1663 aa27.97■■■□□ 2.07
GSE1-216ENST00000637419 DNMBPQ6XZF7 1577 aa27.97■■■□□ 2.07
GSE1-216ENST00000637419 HNRNPUQ00839 825 aaKnown RBP eCLIP27.95■■■□□ 2.07
GSE1-216ENST00000637419 TOPBP1Q92547 1522 aa27.95■■■□□ 2.07
GSE1-216ENST00000637419 KDM5BQ9UGL1 1544 aa27.95■■■□□ 2.07
GSE1-216ENST00000637419 IRX6P78412 446 aaPredicted RBP27.94■■■□□ 2.06
GSE1-216ENST00000637419 CC2D2AQ9P2K1 1620 aa27.92■■■□□ 2.06
GSE1-216ENST00000637419 LRRIQ1Q96JM4 1722 aa27.92■■■□□ 2.06
GSE1-216ENST00000637419 NCOA2Q15596 1464 aa27.91■■■□□ 2.06
GSE1-216ENST00000637419 CUL7Q14999 1698 aa27.91■■■□□ 2.06
GSE1-216ENST00000637419 MYOM3Q5VTT5 1437 aa27.89■■■□□ 2.05
GSE1-216ENST00000637419 WASHC2AQ641Q2 1341 aa27.88■■■□□ 2.05
GSE1-216ENST00000637419 NESP48681 1621 aa27.86■■■□□ 2.05
GSE1-216ENST00000637419 RRP7BPQ9NSQ0 103 aa27.86■■■□□ 2.05
GSE1-216ENST00000637419 MSH5O43196 834 aa27.85■■■□□ 2.05
GSE1-216ENST00000637419 HSPA5P11021 654 aaKnown RBP27.85■■■□□ 2.05
GSE1-216ENST00000637419 CHIC2Q9UKJ5 165 aa27.84■■■□□ 2.05
GSE1-216ENST00000637419 GRIN2BQ13224 1484 aa27.81■■■□□ 2.04
GSE1-216ENST00000637419 CCDC184Q52MB2 194 aa27.79■■■□□ 2.04
GSE1-216ENST00000637419 SAMD9Q5K651 1589 aa27.79■■■□□ 2.04
GSE1-216ENST00000637419 TDRD9Q8NDG6 1382 aaKnown RBP27.79■■■□□ 2.04
GSE1-216ENST00000637419 DENND4BO75064 1496 aaPredicted RBP27.78■■■□□ 2.04
GSE1-216ENST00000637419 SUPT6HQ7KZ85 1726 aaKnown RBP27.76■■■□□ 2.03
GSE1-216ENST00000637419 BCL11AQ9H165 835 aa27.76■■■□□ 2.03
GSE1-216ENST00000637419 MAGI3Q5TCQ9 1506 aa27.74■■■□□ 2.03
GSE1-216ENST00000637419 EHBP1L1Q8N3D4 1523 aa27.72■■■□□ 2.03
GSE1-216ENST00000637419 UGGT2Q9NYU1 1516 aa27.72■■■□□ 2.03
GSE1-216ENST00000637419 C11orf95C9JLR9 678 aaPredicted RBP27.71■■■□□ 2.03
GSE1-216ENST00000637419 KDM6BO15054 1643 aa27.7■■■□□ 2.02
GSE1-216ENST00000637419 EIF4G2P78344 907 aaKnown RBP eCLIP27.7■■■□□ 2.026e-7■■■■□ 20
GSE1-216ENST00000637419 CDK11AQ9UQ88 783 aaPredicted RBP27.69■■■□□ 2.02
GSE1-216ENST00000637419 FOXD1Q16676 465 aa27.69■■■□□ 2.02
GSE1-216ENST00000637419 URB2Q14146 1524 aaKnown RBP27.68■■■□□ 2.02
GSE1-216ENST00000637419 ARHGEF11O15085 1522 aa27.67■■■□□ 2.02
GSE1-216ENST00000637419 L3MBTL2Q969R5 705 aa27.66■■■□□ 2.02
GSE1-216ENST00000637419 CNTLNQ9NXG0 1405 aa27.64■■■□□ 2.02
GSE1-216ENST00000637419 THOC2Q8NI27 1593 aaKnown RBP27.64■■■□□ 2.02
GSE1-216ENST00000637419 MPHOSPH9Q99550 1183 aa27.64■■■□□ 2.01
GSE1-216ENST00000637419 GAPVD1Q14C86 1478 aa27.63■■■□□ 2.01
GSE1-216ENST00000637419 ABCA5Q8WWZ7 1642 aa27.63■■■□□ 2.01
GSE1-216ENST00000637419 FAM9BQ8IZU0 186 aa27.62■■■□□ 2.01
GSE1-216ENST00000637419 FANCIQ9NVI1 1328 aa27.62■■■□□ 2.01
GSE1-216ENST00000637419 HECW1Q76N89 1606 aa27.62■■■□□ 2.01
GSE1-216ENST00000637419 GCC2Q8IWJ2 1684 aa27.61■■■□□ 2.01
GSE1-216ENST00000637419 TCOF1Q13428 1488 aaKnown RBP27.6■■■□□ 2.01
GSE1-216ENST00000637419 PRKRIP1Q9H875 184 aaPredicted RBP27.6■■■□□ 2.01
GSE1-216ENST00000637419 ARID3CA6NKF2 412 aa27.58■■■□□ 2.01
GSE1-216ENST00000637419 CCDC7Q96M83 1385 aa27.57■■■□□ 2
GSE1-216ENST00000637419 PPP4R2Q9NY27 417 aa27.56■■■□□ 2
GSE1-216ENST00000637419 NCOA1Q15788 1441 aa27.55■■■□□ 2
GSE1-216ENST00000637419 NBPF8Q3BBV2 869 aa27.54■■■□□ 2
GSE1-216ENST00000637419 MRS2Q9HD23 443 aa27.54■■■□□ 2
GSE1-216ENST00000637419 B4GALNT3Q6L9W6 998 aa27.52■■■□□ 2
GSE1-216ENST00000637419 LAMC3Q9Y6N6 1575 aa27.51■■■□□ 2
GSE1-216ENST00000637419 ERICH6BQ5W0A0 696 aa27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms