RNA–Protein interactions for RNA: ENST00000636554.1

THUMPD1-206, Transcript of THUMP domain containing 1, humanhuman

TSL 5

Gene THUMPD1, Length 2,567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-206ENST00000636554 PHLDB1Q86UU1 1377 aa21.4■■□□□ 1.02
THUMPD1-206ENST00000636554 LRRC9Q6ZRR7 1453 aa21.37■■□□□ 1.01
THUMPD1-206ENST00000636554 CFTRP13569 1480 aa21.37■■□□□ 1.01
THUMPD1-206ENST00000636554 NCAPD3P42695 1498 aa21.37■■□□□ 1.01
THUMPD1-206ENST00000636554 HIRIP3Q9BW71 556 aaPredicted RBP21.36■■□□□ 1.01
THUMPD1-206ENST00000636554 FAM50AQ14320 339 aaKnown RBP21.36■■□□□ 1.01
THUMPD1-206ENST00000636554 MAP3K1Q13233 1512 aa21.34■■□□□ 1.01
THUMPD1-206ENST00000636554 IGF1RP08069 1367 aa21.34■■□□□ 1.01
THUMPD1-206ENST00000636554 PPP1R15AO75807 674 aaPredicted RBP21.32■■□□□ 1
THUMPD1-206ENST00000636554 TRIM52Q96A61 297 aa21.29■■□□□ 1
THUMPD1-206ENST00000636554 PCF11O94913 1555 aaKnown RBP21.28■■□□□ 1
THUMPD1-206ENST00000636554 CFAP43Q8NDM7 1665 aa21.27■■□□□ 1
THUMPD1-206ENST00000636554 CARMIL1Q5VZK9 1371 aa21.25■□□□□ 0.99
THUMPD1-206ENST00000636554 P3H3Q8IVL6 736 aa21.25■□□□□ 0.99
THUMPD1-206ENST00000636554 PRDM2Q13029 1718 aa21.23■□□□□ 0.99
THUMPD1-206ENST00000636554 ATP1B4Q9UN42 357 aaPredicted RBP21.22■□□□□ 0.99
THUMPD1-206ENST00000636554 NEFLP07196 543 aa21.2■□□□□ 0.98
THUMPD1-206ENST00000636554 FHAD1B1AJZ9 1412 aa21.19■□□□□ 0.98
THUMPD1-206ENST00000636554 FGD5Q6ZNL6 1462 aa21.19■□□□□ 0.98
THUMPD1-206ENST00000636554 ANP32CO43423 234 aa21.18■□□□□ 0.98
THUMPD1-206ENST00000636554 RBM19Q9Y4C8 960 aaKnown RBP21.18■□□□□ 0.98
THUMPD1-206ENST00000636554 CCER2I3L3R5 266 aa21.17■□□□□ 0.98
THUMPD1-206ENST00000636554 FHOD3Q2V2M9 1422 aa21.15■□□□□ 0.98
THUMPD1-206ENST00000636554 TIMELESSQ9UNS1 1208 aa21.15■□□□□ 0.98
THUMPD1-206ENST00000636554 TONSLQ96HA7 1378 aa21.08■□□□□ 0.97
THUMPD1-206ENST00000636554 FYCO1Q9BQS8 1478 aa21.07■□□□□ 0.96
THUMPD1-206ENST00000636554 CCDC18Q5T9S5 1454 aa21.05■□□□□ 0.96
THUMPD1-206ENST00000636554 BCL11AQ9H165 835 aa21.05■□□□□ 0.96
THUMPD1-206ENST00000636554 CADPSQ9ULU8 1353 aa21.03■□□□□ 0.96
THUMPD1-206ENST00000636554 FGD6Q6ZV73 1430 aa21.03■□□□□ 0.96
THUMPD1-206ENST00000636554 CASKIN1Q8WXD9 1431 aa21.02■□□□□ 0.96
THUMPD1-206ENST00000636554 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.02■□□□□ 0.96
THUMPD1-206ENST00000636554 PTPRKQ15262 1439 aa21.01■□□□□ 0.95
THUMPD1-206ENST00000636554 EFCAB5A4FU69 1503 aa20.98■□□□□ 0.95
THUMPD1-206ENST00000636554 IRX6P78412 446 aaPredicted RBP20.98■□□□□ 0.95
THUMPD1-206ENST00000636554 PTPN23Q9H3S7 1636 aa20.98■□□□□ 0.95
THUMPD1-206ENST00000636554 MSH5O43196 834 aa20.97■□□□□ 0.95
THUMPD1-206ENST00000636554 UACAQ9BZF9 1416 aa20.97■□□□□ 0.95
THUMPD1-206ENST00000636554 RAD54L2Q9Y4B4 1467 aa20.96■□□□□ 0.95
THUMPD1-206ENST00000636554 HFM1A2PYH4 1435 aa20.96■□□□□ 0.95
THUMPD1-206ENST00000636554 AQRO60306 1485 aaKnown RBP eCLIP20.96■□□□□ 0.955e-10■■■■□ 23.4
THUMPD1-206ENST00000636554 HNRNPUQ00839 825 aaKnown RBP eCLIP20.96■□□□□ 0.95
THUMPD1-206ENST00000636554 KDM5BQ9UGL1 1544 aa20.95■□□□□ 0.94
THUMPD1-206ENST00000636554 CTTNBP2Q8WZ74 1663 aa20.93■□□□□ 0.94
THUMPD1-206ENST00000636554 SNAPC4Q5SXM2 1469 aa20.93■□□□□ 0.94
THUMPD1-206ENST00000636554 MTUS2Q5JR59 1369 aa20.91■□□□□ 0.94
THUMPD1-206ENST00000636554 LRRIQ1Q96JM4 1722 aa20.91■□□□□ 0.94
THUMPD1-206ENST00000636554 NAIPQ13075 1403 aa20.91■□□□□ 0.94
THUMPD1-206ENST00000636554 FANCD2Q9BXW9 1451 aa20.89■□□□□ 0.93
THUMPD1-206ENST00000636554 FMN1Q68DA7 1419 aa20.88■□□□□ 0.93
THUMPD1-206ENST00000636554 ABCA10Q8WWZ4 1543 aa20.87■□□□□ 0.93
THUMPD1-206ENST00000636554 POLA1P09884 1462 aaPredicted RBP20.86■□□□□ 0.93
THUMPD1-206ENST00000636554 WASHC2AQ641Q2 1341 aa20.86■□□□□ 0.93
THUMPD1-206ENST00000636554 NCOA2Q15596 1464 aa20.85■□□□□ 0.93
THUMPD1-206ENST00000636554 CC2D2AQ9P2K1 1620 aa20.85■□□□□ 0.93
THUMPD1-206ENST00000636554 CUL7Q14999 1698 aa20.84■□□□□ 0.93
THUMPD1-206ENST00000636554 DNMBPQ6XZF7 1577 aa20.84■□□□□ 0.93
THUMPD1-206ENST00000636554 MYOM3Q5VTT5 1437 aa20.83■□□□□ 0.92
THUMPD1-206ENST00000636554 HSPA5P11021 654 aaKnown RBP20.82■□□□□ 0.92
THUMPD1-206ENST00000636554 TOPBP1Q92547 1522 aa20.81■□□□□ 0.92
THUMPD1-206ENST00000636554 CCDC184Q52MB2 194 aa20.81■□□□□ 0.92
THUMPD1-206ENST00000636554 CDK11AQ9UQ88 783 aaPredicted RBP20.8■□□□□ 0.92
THUMPD1-206ENST00000636554 FANCIQ9NVI1 1328 aa20.79■□□□□ 0.92
THUMPD1-206ENST00000636554 DENND4BO75064 1496 aaPredicted RBP20.78■□□□□ 0.92
THUMPD1-206ENST00000636554 RRP7BPQ9NSQ0 103 aa20.78■□□□□ 0.92
THUMPD1-206ENST00000636554 SUPT6HQ7KZ85 1726 aaKnown RBP20.77■□□□□ 0.92
THUMPD1-206ENST00000636554 SAMD9Q5K651 1589 aa20.76■□□□□ 0.91
THUMPD1-206ENST00000636554 GRIN2BQ13224 1484 aa20.76■□□□□ 0.91
THUMPD1-206ENST00000636554 CHIC2Q9UKJ5 165 aa20.75■□□□□ 0.91
THUMPD1-206ENST00000636554 EHBP1L1Q8N3D4 1523 aa20.73■□□□□ 0.91
THUMPD1-206ENST00000636554 KDM6BO15054 1643 aa20.73■□□□□ 0.91
THUMPD1-206ENST00000636554 CNTLNQ9NXG0 1405 aa20.73■□□□□ 0.91
THUMPD1-206ENST00000636554 MAGI3Q5TCQ9 1506 aa20.73■□□□□ 0.91
THUMPD1-206ENST00000636554 HECW1Q76N89 1606 aa20.72■□□□□ 0.91
THUMPD1-206ENST00000636554 UGGT2Q9NYU1 1516 aa20.71■□□□□ 0.91
THUMPD1-206ENST00000636554 NESP48681 1621 aa20.71■□□□□ 0.91
THUMPD1-206ENST00000636554 GCC2Q8IWJ2 1684 aa20.71■□□□□ 0.91
THUMPD1-206ENST00000636554 EIF4G2P78344 907 aaKnown RBP eCLIP20.7■□□□□ 0.9
THUMPD1-206ENST00000636554 C11orf95C9JLR9 678 aaPredicted RBP20.7■□□□□ 0.9
THUMPD1-206ENST00000636554 ERICH6Q7L0X2 663 aa20.69■□□□□ 0.9
THUMPD1-206ENST00000636554 FAM9BQ8IZU0 186 aa20.69■□□□□ 0.9
THUMPD1-206ENST00000636554 THOC2Q8NI27 1593 aaKnown RBP20.67■□□□□ 0.9
THUMPD1-206ENST00000636554 PPP4R2Q9NY27 417 aa20.67■□□□□ 0.9
THUMPD1-206ENST00000636554 ARHGEF11O15085 1522 aa20.67■□□□□ 0.9
THUMPD1-206ENST00000636554 FOXD1Q16676 465 aa20.67■□□□□ 0.9
THUMPD1-206ENST00000636554 B4GALNT3Q6L9W6 998 aa20.66■□□□□ 0.9
THUMPD1-206ENST00000636554 PRKRIP1Q9H875 184 aaPredicted RBP20.65■□□□□ 0.9
THUMPD1-206ENST00000636554 TDRD9Q8NDG6 1382 aaKnown RBP20.65■□□□□ 0.9
THUMPD1-206ENST00000636554 L3MBTL2Q969R5 705 aa20.64■□□□□ 0.9
THUMPD1-206ENST00000636554 CCDC7Q96M83 1385 aa20.63■□□□□ 0.89
THUMPD1-206ENST00000636554 MRS2Q9HD23 443 aa20.63■□□□□ 0.89
THUMPD1-206ENST00000636554 NCOA1Q15788 1441 aa20.63■□□□□ 0.89
THUMPD1-206ENST00000636554 ERICH6BQ5W0A0 696 aa20.62■□□□□ 0.89
THUMPD1-206ENST00000636554 TCOF1Q13428 1488 aaKnown RBP20.62■□□□□ 0.89
THUMPD1-206ENST00000636554 ABCA5Q8WWZ7 1642 aa20.61■□□□□ 0.89
THUMPD1-206ENST00000636554 MPHOSPH9Q99550 1183 aa20.61■□□□□ 0.89
THUMPD1-206ENST00000636554 URB2Q14146 1524 aaKnown RBP20.59■□□□□ 0.89
THUMPD1-206ENST00000636554 ZBED9Q6R2W3 1325 aa20.59■□□□□ 0.89
THUMPD1-206ENST00000636554 NBPF8Q3BBV2 869 aa20.56■□□□□ 0.88
THUMPD1-206ENST00000636554 GAPVD1Q14C86 1478 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms