RNA–Protein interactions for RNA: ENST00000636254.1

ARID1B-215, Transcript of AT-rich interaction domain 1B, humanhuman

TSL 5

Gene ARID1B, Length 3,848 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-215ENST00000636254 NEUROD1Q13562 356 aa11.53□□□□□ -0.56
ARID1B-215ENST00000636254 CUX2O14529 1486 aa11.52□□□□□ -0.56
ARID1B-215ENST00000636254 DNMBPQ6XZF7 1577 aa11.52□□□□□ -0.57
ARID1B-215ENST00000636254 POLA1P09884 1462 aaPredicted RBP11.51□□□□□ -0.57
ARID1B-215ENST00000636254 KIF27Q86VH2 1401 aa11.51□□□□□ -0.57
ARID1B-215ENST00000636254 CNGB1Q14028 1251 aaPredicted RBP11.51□□□□□ -0.57
ARID1B-215ENST00000636254 ACIN1Q9UKV3 1341 aaKnown RBP11.5□□□□□ -0.57
ARID1B-215ENST00000636254 TULP1O00294 542 aaPredicted RBP11.5□□□□□ -0.57
ARID1B-215ENST00000636254 ERICH3Q5RHP9 1530 aa11.5□□□□□ -0.57
ARID1B-215ENST00000636254 P3H3Q8IVL6 736 aa11.49□□□□□ -0.57
ARID1B-215ENST00000636254 IGF1RP08069 1367 aa11.49□□□□□ -0.57
ARID1B-215ENST00000636254 CLIP1P30622 1438 aa11.48□□□□□ -0.57
ARID1B-215ENST00000636254 ZNF316A6NFI3 1004 aaPredicted RBP11.47□□□□□ -0.57
ARID1B-215ENST00000636254 WDR97A6NE52 1622 aa11.46□□□□□ -0.57
ARID1B-215ENST00000636254 FAM50AQ14320 339 aaKnown RBP11.44□□□□□ -0.58
ARID1B-215ENST00000636254 ABCA10Q8WWZ4 1543 aa11.43□□□□□ -0.58
ARID1B-215ENST00000636254 FBLN2P98095 1184 aa11.43□□□□□ -0.58
ARID1B-215ENST00000636254 ARAP1Q96P48 1450 aa11.43□□□□□ -0.58
ARID1B-215ENST00000636254 AEBP2Q6ZN18 517 aaPredicted RBP11.4□□□□□ -0.58
ARID1B-215ENST00000636254 PDS5BQ9NTI5 1447 aa11.4□□□□□ -0.58
ARID1B-215ENST00000636254 VPS8Q8N3P4 1428 aa11.4□□□□□ -0.59
ARID1B-215ENST00000636254 BCANQ96GW7 911 aa11.39□□□□□ -0.59
ARID1B-215ENST00000636254 TARBP1Q13395 1621 aaKnown RBP11.38□□□□□ -0.59
ARID1B-215ENST00000636254 ABCA5Q8WWZ7 1642 aa11.38□□□□□ -0.59
ARID1B-215ENST00000636254 ARHGAP35Q9NRY4 1499 aa11.38□□□□□ -0.59
ARID1B-215ENST00000636254 CARMIL1Q5VZK9 1371 aa11.38□□□□□ -0.59
ARID1B-215ENST00000636254 MIER1Q8N108 512 aa11.38□□□□□ -0.59
ARID1B-215ENST00000636254 TDRD9Q8NDG6 1382 aaKnown RBP11.37□□□□□ -0.59
ARID1B-215ENST00000636254 ARID3CA6NKF2 412 aa11.37□□□□□ -0.59
ARID1B-215ENST00000636254 UBE2Q2Q8WVN8 375 aa11.35□□□□□ -0.59
ARID1B-215ENST00000636254 POLR3GLQ9BT43 218 aa11.34□□□□□ -0.59
ARID1B-215ENST00000636254 HIRIP3Q9BW71 556 aaPredicted RBP11.32□□□□□ -0.6
ARID1B-215ENST00000636254 HOMEZQ8IX15 550 aa11.31□□□□□ -0.6
ARID1B-215ENST00000636254 MRC2Q9UBG0 1479 aa11.31□□□□□ -0.6
ARID1B-215ENST00000636254 CUL7Q14999 1698 aa11.3□□□□□ -0.6
ARID1B-215ENST00000636254 GAPVD1Q14C86 1478 aa11.3□□□□□ -0.6
ARID1B-215ENST00000636254 KANK4Q5T7N3 995 aaPredicted RBP11.29□□□□□ -0.6
ARID1B-215ENST00000636254 AMER1Q5JTC6 1135 aaPredicted RBP11.29□□□□□ -0.6
ARID1B-215ENST00000636254 ZNF608Q9ULD9 1512 aaPredicted RBP11.29□□□□□ -0.6
ARID1B-215ENST00000636254 AQRO60306 1485 aaKnown RBP eCLIP11.29□□□□□ -0.6
ARID1B-215ENST00000636254 PBRM1Q86U86 1689 aa11.28□□□□□ -0.6
ARID1B-215ENST00000636254 WDR62O43379 1518 aa11.28□□□□□ -0.6
ARID1B-215ENST00000636254 CTTNBP2Q8WZ74 1663 aa11.27□□□□□ -0.6
ARID1B-215ENST00000636254 THOC2Q8NI27 1593 aaKnown RBP11.27□□□□□ -0.61
ARID1B-215ENST00000636254 NEFLP07196 543 aa11.27□□□□□ -0.61
ARID1B-215ENST00000636254 ANO8Q9HCE9 1232 aaPredicted RBP11.26□□□□□ -0.61
ARID1B-215ENST00000636254 PKNOX2Q96KN3 472 aa11.25□□□□□ -0.61
ARID1B-215ENST00000636254 PDIA4P13667 645 aaKnown RBP11.24□□□□□ -0.61
ARID1B-215ENST00000636254 FHOD3Q2V2M9 1422 aa11.23□□□□□ -0.61
ARID1B-215ENST00000636254 PCF11O94913 1555 aaKnown RBP11.22□□□□□ -0.61
ARID1B-215ENST00000636254 DDX10Q13206 875 aaKnown RBP11.22□□□□□ -0.61
ARID1B-215ENST00000636254 ERCC6Q03468 1493 aa11.22□□□□□ -0.61
ARID1B-215ENST00000636254 TRIM52Q96A61 297 aa11.21□□□□□ -0.61
ARID1B-215ENST00000636254 ADAMTS12P58397 1594 aa11.2□□□□□ -0.62
ARID1B-215ENST00000636254 LRRIQ1Q96JM4 1722 aa11.2□□□□□ -0.62
ARID1B-215ENST00000636254 EIF4G3O43432 1585 aaKnown RBP11.2□□□□□ -0.62
ARID1B-215ENST00000636254 SAMD9Q5K651 1589 aa11.18□□□□□ -0.62
ARID1B-215ENST00000636254 TIAM1Q13009 1591 aa11.17□□□□□ -0.62
ARID1B-215ENST00000636254 PDE4CQ08493 712 aa11.16□□□□□ -0.62
ARID1B-215ENST00000636254 IFT140Q96RY7 1462 aa11.16□□□□□ -0.62
ARID1B-215ENST00000636254 SNAPC4Q5SXM2 1469 aa11.15□□□□□ -0.63
ARID1B-215ENST00000636254 ZNF326Q5BKZ1 582 aaKnown RBP11.14□□□□□ -0.63
ARID1B-215ENST00000636254 CFAP43Q8NDM7 1665 aa11.14□□□□□ -0.63
ARID1B-215ENST00000636254 GRIN2BQ13224 1484 aa11.14□□□□□ -0.63
ARID1B-215ENST00000636254 EFCAB5A4FU69 1503 aa11.14□□□□□ -0.63
ARID1B-215ENST00000636254 FHAD1B1AJZ9 1412 aa11.13□□□□□ -0.63
ARID1B-215ENST00000636254 KCNA4P22459 653 aa11.13□□□□□ -0.63
ARID1B-215ENST00000636254 CHIC2Q9UKJ5 165 aa11.13□□□□□ -0.63
ARID1B-215ENST00000636254 TAOK2Q9UL54 1235 aa11.13□□□□□ -0.63
ARID1B-215ENST00000636254 CHMP7Q8WUX9 453 aaPredicted RBP11.12□□□□□ -0.63
ARID1B-215ENST00000636254 SIN3AQ96ST3 1273 aa11.12□□□□□ -0.63
ARID1B-215ENST00000636254 LRRC9Q6ZRR7 1453 aa11.11□□□□□ -0.63
ARID1B-215ENST00000636254 SENP3-EIF4A1A0A087X0R7 540 aa11.11□□□□□ -0.63
ARID1B-215ENST00000636254 NPM2Q86SE8 214 aaKnown RBP11.11□□□□□ -0.63
ARID1B-215ENST00000636254 ANP32EQ9BTT0 268 aa11.11□□□□□ -0.63
ARID1B-215ENST00000636254 RRBP1Q9P2E9 1410 aaKnown RBP11.1□□□□□ -0.63
ARID1B-215ENST00000636254 PHLDB1Q86UU1 1377 aa11.09□□□□□ -0.63
ARID1B-215ENST00000636254 IQGAP2Q13576 1575 aa11.09□□□□□ -0.63
ARID1B-215ENST00000636254 MAP3K1Q13233 1512 aa11.09□□□□□ -0.63
ARID1B-215ENST00000636254 CASKIN1Q8WXD9 1431 aa11.08□□□□□ -0.64
ARID1B-215ENST00000636254 FYCO1Q9BQS8 1478 aa11.08□□□□□ -0.64
ARID1B-215ENST00000636254 FKBP8Q14318 412 aa11.08□□□□□ -0.64
ARID1B-215ENST00000636254 ANP32CO43423 234 aa11.07□□□□□ -0.64
ARID1B-215ENST00000636254 C14orf37Q86TY3 774 aa11.07□□□□□ -0.64
ARID1B-215ENST00000636254 CEP170Q5SW79 1584 aa11.07□□□□□ -0.64
ARID1B-215ENST00000636254 GRIN2AQ12879 1464 aa11.06□□□□□ -0.64
ARID1B-215ENST00000636254 MAGI3Q5TCQ9 1506 aa11.06□□□□□ -0.64
ARID1B-215ENST00000636254 TPRNQ4KMQ1 711 aa11.06□□□□□ -0.64
ARID1B-215ENST00000636254 HAP1P54257 671 aaPredicted RBP11.05□□□□□ -0.64
ARID1B-215ENST00000636254 IRX6P78412 446 aaPredicted RBP11.05□□□□□ -0.64
ARID1B-215ENST00000636254 DISP1Q96F81 1524 aa11.04□□□□□ -0.64
ARID1B-215ENST00000636254 CCNB3Q8WWL7 1395 aa11.03□□□□□ -0.64
ARID1B-215ENST00000636254 FMN1Q68DA7 1419 aa11.03□□□□□ -0.64
ARID1B-215ENST00000636254 ZNF777Q9ULD5 760 aaPredicted RBP11.02□□□□□ -0.64
ARID1B-215ENST00000636254 UGGT2Q9NYU1 1516 aa11.02□□□□□ -0.64
ARID1B-215ENST00000636254 KCNH8Q96L42 1107 aa11.01□□□□□ -0.65
ARID1B-215ENST00000636254 RRP7BPQ9NSQ0 103 aa11.01□□□□□ -0.65
ARID1B-215ENST00000636254 KIAA0556O60303 1618 aa11.01□□□□□ -0.65
ARID1B-215ENST00000636254 MAGI1Q96QZ7 1491 aaPredicted RBP11.01□□□□□ -0.65
ARID1B-215ENST00000636254 SYNJ2O15056 1496 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms