RNA–Protein interactions for RNA: ENST00000636120.1

PDE4D-228, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 6,659 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-228ENST00000636120 EIF4G1Q04637 1599 aaKnown RBP8.76□□□□□ -1.01
PDE4D-228ENST00000636120 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.76□□□□□ -1.01
PDE4D-228ENST00000636120 VPS8Q8N3P4 1428 aa8.75□□□□□ -1.01
PDE4D-228ENST00000636120 DDX10Q13206 875 aaKnown RBP8.75□□□□□ -1.01
PDE4D-228ENST00000636120 EIF4G2P78344 907 aaKnown RBP eCLIP8.74□□□□□ -1.01
PDE4D-228ENST00000636120 ATAD2BQ9ULI0 1458 aa8.73□□□□□ -1.01
PDE4D-228ENST00000636120 CFDP1Q9UEE9 299 aaPredicted RBP8.73□□□□□ -1.01
PDE4D-228ENST00000636120 RRP7BPQ9NSQ0 103 aa8.73□□□□□ -1.01
PDE4D-228ENST00000636120 CCNB3Q8WWL7 1395 aa8.72□□□□□ -1.01
PDE4D-228ENST00000636120 ARHGAP35Q9NRY4 1499 aa8.72□□□□□ -1.01
PDE4D-228ENST00000636120 HNRNPUQ00839 825 aaKnown RBP eCLIP8.71□□□□□ -1.01
PDE4D-228ENST00000636120 ANP32AP39687 249 aaKnown RBP8.71□□□□□ -1.02
PDE4D-228ENST00000636120 TMC1Q8TDI8 760 aa8.71□□□□□ -1.02
PDE4D-228ENST00000636120 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.7□□□□□ -1.02
PDE4D-228ENST00000636120 FMN1Q68DA7 1419 aa8.7□□□□□ -1.02
PDE4D-228ENST00000636120 WDR43Q15061 677 aaKnown RBP eCLIP8.7□□□□□ -1.02
PDE4D-228ENST00000636120 CARMIL2Q6F5E8 1435 aa8.69□□□□□ -1.02
PDE4D-228ENST00000636120 CADPSQ9ULU8 1353 aa8.69□□□□□ -1.02
PDE4D-228ENST00000636120 FAM9BQ8IZU0 186 aa8.69□□□□□ -1.02
PDE4D-228ENST00000636120 SLC24A1O60721 1099 aa8.68□□□□□ -1.02
PDE4D-228ENST00000636120 CDCA8Q53HL2 280 aa8.68□□□□□ -1.02
PDE4D-228ENST00000636120 KDM2AQ9Y2K7 1162 aa8.68□□□□□ -1.02
PDE4D-228ENST00000636120 RAPGEF2Q9Y4G8 1499 aa8.68□□□□□ -1.02
PDE4D-228ENST00000636120 TIMELESSQ9UNS1 1208 aa8.68□□□□□ -1.02
PDE4D-228ENST00000636120 FKBP8Q14318 412 aa8.67□□□□□ -1.02
PDE4D-228ENST00000636120 KCNH8Q96L42 1107 aa8.67□□□□□ -1.02
PDE4D-228ENST00000636120 MRS2Q9HD23 443 aa8.66□□□□□ -1.02
PDE4D-228ENST00000636120 SETD5Q9C0A6 1442 aa8.65□□□□□ -1.02
PDE4D-228ENST00000636120 KANK1Q14678 1352 aa8.63□□□□□ -1.03
PDE4D-228ENST00000636120 MIER1Q8N108 512 aa8.63□□□□□ -1.03
PDE4D-228ENST00000636120 UPF2Q9HAU5 1272 aaKnown RBP8.63□□□□□ -1.03
PDE4D-228ENST00000636120 FANCD2Q9BXW9 1451 aa8.61□□□□□ -1.03
PDE4D-228ENST00000636120 PPP1R15AO75807 674 aaPredicted RBP8.6□□□□□ -1.03
PDE4D-228ENST00000636120 CARD11Q9BXL7 1154 aa8.6□□□□□ -1.03
PDE4D-228ENST00000636120 CCDC136Q96JN2 1154 aa8.59□□□□□ -1.03
PDE4D-228ENST00000636120 CCDC18Q5T9S5 1454 aa8.59□□□□□ -1.03
PDE4D-228ENST00000636120 CFAP53Q96M91 514 aa8.58□□□□□ -1.04
PDE4D-228ENST00000636120 KNSTRNQ9Y448 316 aa8.57□□□□□ -1.04
PDE4D-228ENST00000636120 TDRD9Q8NDG6 1382 aaKnown RBP8.57□□□□□ -1.04
PDE4D-228ENST00000636120 NCAPD3P42695 1498 aa8.56□□□□□ -1.04
PDE4D-228ENST00000636120 RGL3Q3MIN7 710 aa8.56□□□□□ -1.04
PDE4D-228ENST00000636120 NPM2Q86SE8 214 aaKnown RBP8.55□□□□□ -1.04
PDE4D-228ENST00000636120 ANKRD30AQ9BXX3 1397 aa8.55□□□□□ -1.04
PDE4D-228ENST00000636120 PLPPR3Q6T4P5 718 aa8.55□□□□□ -1.04
PDE4D-228ENST00000636120 HIRIP3Q9BW71 556 aaPredicted RBP8.55□□□□□ -1.04
PDE4D-228ENST00000636120 MYH16Q9H6N6 1097 aa8.54□□□□□ -1.04
PDE4D-228ENST00000636120 SALL2Q9Y467 1007 aaPredicted RBP8.54□□□□□ -1.04
PDE4D-228ENST00000636120 SIN3AQ96ST3 1273 aa8.53□□□□□ -1.04
PDE4D-228ENST00000636120 KIF21BO75037 1637 aa8.53□□□□□ -1.04
PDE4D-228ENST00000636120 KANK4Q5T7N3 995 aaPredicted RBP8.53□□□□□ -1.04
PDE4D-228ENST00000636120 FHOD3Q2V2M9 1422 aa8.53□□□□□ -1.04
PDE4D-228ENST00000636120 RAB3GAP2Q9H2M9 1393 aa8.52□□□□□ -1.04
PDE4D-228ENST00000636120 TMF1P82094 1093 aa8.52□□□□□ -1.05
PDE4D-228ENST00000636120 RSPH4AQ5TD94 716 aa8.52□□□□□ -1.05
PDE4D-228ENST00000636120 HSP90AA1P07900 732 aaKnown RBP8.52□□□□□ -1.05
PDE4D-228ENST00000636120 BCL11AQ9H165 835 aa8.52□□□□□ -1.05
PDE4D-228ENST00000636120 HDGFP51858 240 aaKnown RBP8.52□□□□□ -1.05
PDE4D-228ENST00000636120 FGD5Q6ZNL6 1462 aa8.52□□□□□ -1.05
PDE4D-228ENST00000636120 ARID4BQ4LE39 1312 aaPredicted RBP8.52□□□□□ -1.05
PDE4D-228ENST00000636120 EIF5BO60841 1220 aaKnown RBP8.52□□□□□ -1.05
PDE4D-228ENST00000636120 HMGXB3Q12766 1538 aa8.51□□□□□ -1.05
PDE4D-228ENST00000636120 CCER2I3L3R5 266 aa8.51□□□□□ -1.05
PDE4D-228ENST00000636120 PNNQ9H307 717 aaKnown RBP8.51□□□□□ -1.05
PDE4D-228ENST00000636120 CUX1P39880 1505 aa8.51□□□□□ -1.05
PDE4D-228ENST00000636120 ANP32BQ92688 251 aaKnown RBP8.5□□□□□ -1.05
PDE4D-228ENST00000636120 ERICH3Q5RHP9 1530 aa8.5□□□□□ -1.05
PDE4D-228ENST00000636120 NUDCQ9Y266 331 aa8.49□□□□□ -1.05
PDE4D-228ENST00000636120 EFCAB2Q5VUJ9 269 aa8.49□□□□□ -1.05
PDE4D-228ENST00000636120 GAPVD1Q14C86 1478 aa8.49□□□□□ -1.05
PDE4D-228ENST00000636120 DDRGK1Q96HY6 314 aa8.49□□□□□ -1.05
PDE4D-228ENST00000636120 DCAF11Q8TEB1 546 aa8.48□□□□□ -1.05
PDE4D-228ENST00000636120 POGKQ9P215 609 aa8.48□□□□□ -1.05
PDE4D-228ENST00000636120 RUSC2Q8N2Y8 1516 aa8.48□□□□□ -1.05
PDE4D-228ENST00000636120 SCAF1Q9H7N4 1312 aaKnown RBP8.47□□□□□ -1.05
PDE4D-228ENST00000636120 EIF3AQ14152 1382 aaKnown RBP8.47□□□□□ -1.05
PDE4D-228ENST00000636120 MPHOSPH9Q99550 1183 aa8.47□□□□□ -1.05
PDE4D-228ENST00000636120 MAPK8IP3Q9UPT6 1336 aa8.47□□□□□ -1.05
PDE4D-228ENST00000636120 PKD2Q13563 968 aa8.47□□□□□ -1.05
PDE4D-228ENST00000636120 CHMP4BQ9H444 224 aaKnown RBP8.47□□□□□ -1.05
PDE4D-228ENST00000636120 MS4A1P11836 297 aa8.46□□□□□ -1.06
PDE4D-228ENST00000636120 TOP2BQ02880 1626 aa8.45□□□□□ -1.06
PDE4D-228ENST00000636120 NUP155O75694 1391 aa8.45□□□□□ -1.06
PDE4D-228ENST00000636120 HSPA5P11021 654 aaKnown RBP8.45□□□□□ -1.06
PDE4D-228ENST00000636120 C14orf37Q86TY3 774 aa8.45□□□□□ -1.06
PDE4D-228ENST00000636120 BECN1Q14457 450 aa8.44□□□□□ -1.06
PDE4D-228ENST00000636120 CFTRP13569 1480 aa8.44□□□□□ -1.06
PDE4D-228ENST00000636120 ROCK2O75116 1388 aaKnown RBP8.44□□□□□ -1.06
PDE4D-228ENST00000636120 KTN1Q86UP2 1357 aaKnown RBP8.44□□□□□ -1.06
PDE4D-228ENST00000636120 IGF1RP08069 1367 aa8.43□□□□□ -1.06
PDE4D-228ENST00000636120 PPP4R2Q9NY27 417 aa8.43□□□□□ -1.06
PDE4D-228ENST00000636120 EFCAB5A4FU69 1503 aa8.43□□□□□ -1.06
PDE4D-228ENST00000636120 JPH4Q96JJ6 628 aa8.43□□□□□ -1.06
PDE4D-228ENST00000636120 SYNJ1O43426 1573 aa8.42□□□□□ -1.06
PDE4D-228ENST00000636120 IRX6P78412 446 aaPredicted RBP8.42□□□□□ -1.06
PDE4D-228ENST00000636120 RALBP1Q15311 655 aa8.42□□□□□ -1.06
PDE4D-228ENST00000636120 FTSJ3Q8IY81 847 aaKnown RBP8.42□□□□□ -1.06
PDE4D-228ENST00000636120 CC2D1BQ5T0F9 858 aaKnown RBP8.41□□□□□ -1.06
PDE4D-228ENST00000636120 UACAQ9BZF9 1416 aa8.41□□□□□ -1.06
PDE4D-228ENST00000636120 CASC1Q6TDU7 716 aa8.41□□□□□ -1.06
PDE4D-228ENST00000636120 CC2D2AQ9P2K1 1620 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms