RNA–Protein interactions for RNA: ENST00000635739.1

SMARCA2-246, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 4,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-246ENST00000635739 SETD5Q9C0A6 1442 aa11.52□□□□□ -0.57
SMARCA2-246ENST00000635739 KIF27Q86VH2 1401 aa11.51□□□□□ -0.57
SMARCA2-246ENST00000635739 POLR3GLQ9BT43 218 aa11.51□□□□□ -0.57
SMARCA2-246ENST00000635739 CNGB1Q14028 1251 aaPredicted RBP11.51□□□□□ -0.57
SMARCA2-246ENST00000635739 PPP4R2Q9NY27 417 aa11.49□□□□□ -0.57
SMARCA2-246ENST00000635739 FAM9BQ8IZU0 186 aa11.49□□□□□ -0.57
SMARCA2-246ENST00000635739 EIF4G1Q04637 1599 aaKnown RBP11.47□□□□□ -0.57
SMARCA2-246ENST00000635739 NBR1Q14596 966 aa11.47□□□□□ -0.57
SMARCA2-246ENST00000635739 PPP1R15AO75807 674 aaPredicted RBP11.47□□□□□ -0.57
SMARCA2-246ENST00000635739 ERICH6BQ5W0A0 696 aa11.46□□□□□ -0.57
SMARCA2-246ENST00000635739 MRS2Q9HD23 443 aa11.45□□□□□ -0.58
SMARCA2-246ENST00000635739 FANCIQ9NVI1 1328 aa11.44□□□□□ -0.58
SMARCA2-246ENST00000635739 DAXXQ9UER7 740 aaPredicted RBP11.44□□□□□ -0.58
SMARCA2-246ENST00000635739 RRBP1Q9P2E9 1410 aaKnown RBP11.43□□□□□ -0.58
SMARCA2-246ENST00000635739 EIF4G2P78344 907 aaKnown RBP eCLIP11.43□□□□□ -0.586e-6■■■■□ 25.1
SMARCA2-246ENST00000635739 ZBTB47Q9UFB7 747 aaPredicted RBP11.43□□□□□ -0.58
SMARCA2-246ENST00000635739 CCDC136Q96JN2 1154 aa11.42□□□□□ -0.58
SMARCA2-246ENST00000635739 DEKP35659 375 aaKnown RBP11.42□□□□□ -0.58
SMARCA2-246ENST00000635739 NOP58Q9Y2X3 529 aaKnown RBP11.4□□□□□ -0.58
SMARCA2-246ENST00000635739 SYNJ1O43426 1573 aa11.4□□□□□ -0.58
SMARCA2-246ENST00000635739 B4GALNT3Q6L9W6 998 aa11.4□□□□□ -0.59
SMARCA2-246ENST00000635739 FHAD1B1AJZ9 1412 aa11.38□□□□□ -0.59
SMARCA2-246ENST00000635739 MTUS2Q5JR59 1369 aa11.37□□□□□ -0.59
SMARCA2-246ENST00000635739 NPM2Q86SE8 214 aaKnown RBP11.36□□□□□ -0.59
SMARCA2-246ENST00000635739 ARAP1Q96P48 1450 aa11.35□□□□□ -0.59
SMARCA2-246ENST00000635739 ERICH3Q5RHP9 1530 aa11.34□□□□□ -0.59
SMARCA2-246ENST00000635739 ATAD2BQ9ULI0 1458 aa11.33□□□□□ -0.6
SMARCA2-246ENST00000635739 CHIC2Q9UKJ5 165 aa11.32□□□□□ -0.6
SMARCA2-246ENST00000635739 CARMIL1Q5VZK9 1371 aa11.32□□□□□ -0.6
SMARCA2-246ENST00000635739 ZNF326Q5BKZ1 582 aaKnown RBP11.32□□□□□ -0.6
SMARCA2-246ENST00000635739 PRXQ9BXM0 1461 aa11.32□□□□□ -0.6
SMARCA2-246ENST00000635739 ARHGAP35Q9NRY4 1499 aa11.32□□□□□ -0.6
SMARCA2-246ENST00000635739 HSPA5P11021 654 aaKnown RBP11.31□□□□□ -0.6
SMARCA2-246ENST00000635739 RRP7BPQ9NSQ0 103 aa11.3□□□□□ -0.6
SMARCA2-246ENST00000635739 MSH5O43196 834 aa11.3□□□□□ -0.6
SMARCA2-246ENST00000635739 CUX2O14529 1486 aa11.3□□□□□ -0.6
SMARCA2-246ENST00000635739 TMC1Q8TDI8 760 aa11.29□□□□□ -0.6
SMARCA2-246ENST00000635739 WDR97A6NE52 1622 aa11.28□□□□□ -0.6
SMARCA2-246ENST00000635739 PHLDB1Q86UU1 1377 aa11.26□□□□□ -0.61
SMARCA2-246ENST00000635739 LRRC9Q6ZRR7 1453 aa11.24□□□□□ -0.61
SMARCA2-246ENST00000635739 TOP2BQ02880 1626 aa11.24□□□□□ -0.61
SMARCA2-246ENST00000635739 PEG3Q9GZU2 1588 aa11.24□□□□□ -0.61
SMARCA2-246ENST00000635739 IPO9Q96P70 1041 aaKnown RBP11.23□□□□□ -0.61
SMARCA2-246ENST00000635739 ZBED9Q6R2W3 1325 aa11.22□□□□□ -0.61
SMARCA2-246ENST00000635739 PPM1GO15355 546 aaPredicted RBP11.21□□□□□ -0.61
SMARCA2-246ENST00000635739 PRKRIP1Q9H875 184 aaPredicted RBP11.21□□□□□ -0.61
SMARCA2-246ENST00000635739 FMN1Q68DA7 1419 aa11.2□□□□□ -0.62
SMARCA2-246ENST00000635739 NEFMP07197 916 aa11.2□□□□□ -0.62
SMARCA2-246ENST00000635739 CCDC18Q5T9S5 1454 aa11.2□□□□□ -0.62
SMARCA2-246ENST00000635739 MAPKBP1O60336 1514 aa11.19□□□□□ -0.62
SMARCA2-246ENST00000635739 SLC4A1APQ9BWU0 796 aaKnown RBP11.19□□□□□ -0.62
SMARCA2-246ENST00000635739 SALL2Q9Y467 1007 aaPredicted RBP11.19□□□□□ -0.62
SMARCA2-246ENST00000635739 ARID3CA6NKF2 412 aa11.19□□□□□ -0.62
SMARCA2-246ENST00000635739 EIF5BO60841 1220 aaKnown RBP11.19□□□□□ -0.62
SMARCA2-246ENST00000635739 NUDCQ9Y266 331 aa11.18□□□□□ -0.62
SMARCA2-246ENST00000635739 IGF1RP08069 1367 aa11.18□□□□□ -0.62
SMARCA2-246ENST00000635739 LAS1LQ9Y4W2 734 aaKnown RBP11.18□□□□□ -0.62
SMARCA2-246ENST00000635739 DDRGK1Q96HY6 314 aa11.18□□□□□ -0.62
SMARCA2-246ENST00000635739 UACAQ9BZF9 1416 aa11.18□□□□□ -0.62
SMARCA2-246ENST00000635739 RTN4Q9NQC3 1192 aaKnown RBP11.18□□□□□ -0.62
SMARCA2-246ENST00000635739 TIAM1Q13009 1591 aa11.17□□□□□ -0.62
SMARCA2-246ENST00000635739 SENP3-EIF4A1A0A087X0R7 540 aa11.17□□□□□ -0.62
SMARCA2-246ENST00000635739 FHOD3Q2V2M9 1422 aa11.17□□□□□ -0.62
SMARCA2-246ENST00000635739 WASHC2AQ641Q2 1341 aa11.17□□□□□ -0.62
SMARCA2-246ENST00000635739 L3MBTL2Q969R5 705 aa11.17□□□□□ -0.62
SMARCA2-246ENST00000635739 MPHOSPH9Q99550 1183 aa11.15□□□□□ -0.62
SMARCA2-246ENST00000635739 MAP3K1Q13233 1512 aa11.14□□□□□ -0.63
SMARCA2-246ENST00000635739 TCERG1O14776 1098 aaKnown RBP11.14□□□□□ -0.63
SMARCA2-246ENST00000635739 FGD6Q6ZV73 1430 aa11.14□□□□□ -0.63
SMARCA2-246ENST00000635739 CNTLNQ9NXG0 1405 aa11.14□□□□□ -0.63
SMARCA2-246ENST00000635739 PAK3O75914 559 aaPredicted RBP11.12□□□□□ -0.63
SMARCA2-246ENST00000635739 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.11□□□□□ -0.63
SMARCA2-246ENST00000635739 FOXD1Q16676 465 aa11.11□□□□□ -0.63
SMARCA2-246ENST00000635739 USP35Q9P2H5 1018 aa11.11□□□□□ -0.63
SMARCA2-246ENST00000635739 CCDC7Q96M83 1385 aa11.11□□□□□ -0.63
SMARCA2-246ENST00000635739 CUX1P39880 1505 aa11.09□□□□□ -0.63
SMARCA2-246ENST00000635739 CCDC184Q52MB2 194 aa11.09□□□□□ -0.63
SMARCA2-246ENST00000635739 ZNF777Q9ULD5 760 aaPredicted RBP11.09□□□□□ -0.63
SMARCA2-246ENST00000635739 HFM1A2PYH4 1435 aa11.08□□□□□ -0.64
SMARCA2-246ENST00000635739 CASKIN1Q8WXD9 1431 aa11.07□□□□□ -0.64
SMARCA2-246ENST00000635739 RCAN3Q9UKA8 241 aa11.07□□□□□ -0.64
SMARCA2-246ENST00000635739 CARD11Q9BXL7 1154 aa11.06□□□□□ -0.64
SMARCA2-246ENST00000635739 KDM2AQ9Y2K7 1162 aa11.06□□□□□ -0.64
SMARCA2-246ENST00000635739 BIVM-ERCC5R4GMW8 1640 aa11.06□□□□□ -0.64
SMARCA2-246ENST00000635739 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.06□□□□□ -0.64
SMARCA2-246ENST00000635739 FBLN2P98095 1184 aa11.05□□□□□ -0.64
SMARCA2-246ENST00000635739 FYCO1Q9BQS8 1478 aa11.05□□□□□ -0.64
SMARCA2-246ENST00000635739 PDE4AP27815 886 aa11.05□□□□□ -0.64
SMARCA2-246ENST00000635739 NCAPD3P42695 1498 aa11.05□□□□□ -0.64
SMARCA2-246ENST00000635739 KIF7Q2M1P5 1343 aa11.05□□□□□ -0.64
SMARCA2-246ENST00000635739 MYOM3Q5VTT5 1437 aa11.04□□□□□ -0.64
SMARCA2-246ENST00000635739 CADPSQ9ULU8 1353 aa11.03□□□□□ -0.64
SMARCA2-246ENST00000635739 CFTRP13569 1480 aa11.02□□□□□ -0.65
SMARCA2-246ENST00000635739 FGD5Q6ZNL6 1462 aa11.02□□□□□ -0.65
SMARCA2-246ENST00000635739 SMG6Q86US8 1419 aaKnown RBP11.02□□□□□ -0.65
SMARCA2-246ENST00000635739 RALBP1Q15311 655 aa11.02□□□□□ -0.65
SMARCA2-246ENST00000635739 AKNAQ7Z591 1439 aa11.02□□□□□ -0.65
SMARCA2-246ENST00000635739 MS4A1P11836 297 aa11.01□□□□□ -0.65
SMARCA2-246ENST00000635739 PRKCSHP14314 528 aaPredicted RBP11.01□□□□□ -0.65
SMARCA2-246ENST00000635739 RRP1P56182 461 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms