RNA–Protein interactions for RNA: ENST00000635739.1

SMARCA2-246, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 4,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-246ENST00000635739 NISCHQ9Y2I1 1504 aa15.37■□□□□ 0.05
SMARCA2-246ENST00000635739 SUPT5HO00267 1087 aaKnown RBP14.02□□□□□ -0.17
SMARCA2-246ENST00000635739 SHROOM4Q9ULL8 1493 aa13.93□□□□□ -0.18
SMARCA2-246ENST00000635739 HRCP23327 699 aa13.7□□□□□ -0.22
SMARCA2-246ENST00000635739 PCGF6Q9BYE7 350 aa13.68□□□□□ -0.22
SMARCA2-246ENST00000635739 DCAF8L2P0C7V8 631 aa13.67□□□□□ -0.22
SMARCA2-246ENST00000635739 CHIC1Q5VXU3 224 aa13.42□□□□□ -0.26
SMARCA2-246ENST00000635739 PELP1Q8IZL8 1130 aaKnown RBP13.41□□□□□ -0.26
SMARCA2-246ENST00000635739 PPARGC1BQ86YN6 1023 aaKnown RBP13.35□□□□□ -0.27
SMARCA2-246ENST00000635739 ZEB1P37275 1124 aaPredicted RBP13.3□□□□□ -0.28
SMARCA2-246ENST00000635739 TRIM26Q12899 539 aaPredicted RBP13.24□□□□□ -0.29
SMARCA2-246ENST00000635739 LOC105371045A0A1W2PR82 267 aa13.16□□□□□ -0.3
SMARCA2-246ENST00000635739 MYO15BQ96JP2 1530 aa13.06□□□□□ -0.32
SMARCA2-246ENST00000635739 DCAF1Q9Y4B6 1507 aa13.03□□□□□ -0.32
SMARCA2-246ENST00000635739 FAM9AQ8IZU1 332 aaPredicted RBP13.03□□□□□ -0.32
SMARCA2-246ENST00000635739 EHMT2Q96KQ7 1210 aa13.03□□□□□ -0.32
SMARCA2-246ENST00000635739 TRIM41Q8WV44 630 aa13□□□□□ -0.33
SMARCA2-246ENST00000635739 MYT1Q01538 1121 aa12.98□□□□□ -0.33
SMARCA2-246ENST00000635739 CENPBP07199 599 aaPredicted RBP12.97□□□□□ -0.33
SMARCA2-246ENST00000635739 ZCCHC6Q5VYS8 1495 aaKnown RBP12.97□□□□□ -0.33
SMARCA2-246ENST00000635739 CCER1Q8TC90 406 aaPredicted RBP12.9□□□□□ -0.34
SMARCA2-246ENST00000635739 SCAF1Q9H7N4 1312 aaKnown RBP12.77□□□□□ -0.37
SMARCA2-246ENST00000635739 CCDC180Q9P1Z9 1646 aa12.77□□□□□ -0.37
SMARCA2-246ENST00000635739 ACIN1Q9UKV3 1341 aaKnown RBP12.71□□□□□ -0.37
SMARCA2-246ENST00000635739 TTBK1Q5TCY1 1321 aaPredicted RBP12.69□□□□□ -0.38
SMARCA2-246ENST00000635739 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.68□□□□□ -0.38
SMARCA2-246ENST00000635739 DIEXFQ68CQ4 756 aaKnown RBP12.68□□□□□ -0.38
SMARCA2-246ENST00000635739 GTF3C3Q9Y5Q9 886 aa12.66□□□□□ -0.38
SMARCA2-246ENST00000635739 YTHDC1Q96MU7 727 aaKnown RBP12.62□□□□□ -0.39
SMARCA2-246ENST00000635739 NEUROD1Q13562 356 aa12.57□□□□□ -0.4
SMARCA2-246ENST00000635739 APLP2Q06481 763 aa12.52□□□□□ -0.4
SMARCA2-246ENST00000635739 UBTFP17480 764 aaKnown RBP12.49□□□□□ -0.41
SMARCA2-246ENST00000635739 ZNF316A6NFI3 1004 aaPredicted RBP12.44□□□□□ -0.42
SMARCA2-246ENST00000635739 RSF1Q96T23 1441 aaPredicted RBP12.38□□□□□ -0.43
SMARCA2-246ENST00000635739 HNRNPUL2Q1KMD3 747 aaKnown RBP12.35□□□□□ -0.43
SMARCA2-246ENST00000635739 SCRIBQ14160 1630 aa12.26□□□□□ -0.45
SMARCA2-246ENST00000635739 RANGAP1P46060 587 aaPredicted RBP12.25□□□□□ -0.45
SMARCA2-246ENST00000635739 ABCC9O60706 1549 aa12.25□□□□□ -0.45
SMARCA2-246ENST00000635739 RB1CC1Q8TDY2 1594 aa12.23□□□□□ -0.45
SMARCA2-246ENST00000635739 MIER1Q8N108 512 aa12.21□□□□□ -0.45
SMARCA2-246ENST00000635739 CLSPNQ9HAW4 1339 aa12.19□□□□□ -0.46
SMARCA2-246ENST00000635739 CSRNP3Q8WYN3 585 aa12.19□□□□□ -0.46
SMARCA2-246ENST00000635739 NEFLP07196 543 aa12.19□□□□□ -0.46
SMARCA2-246ENST00000635739 CEP162Q5TB80 1403 aa12.12□□□□□ -0.47
SMARCA2-246ENST00000635739 ERICH6Q7L0X2 663 aa12.1□□□□□ -0.47
SMARCA2-246ENST00000635739 TNIKQ9UKE5 1360 aa12.07□□□□□ -0.48
SMARCA2-246ENST00000635739 EEA1Q15075 1411 aa12.02□□□□□ -0.48
SMARCA2-246ENST00000635739 CECR2Q9BXF3 1484 aa12.02□□□□□ -0.49
SMARCA2-246ENST00000635739 ITGAEP38570 1179 aa12.01□□□□□ -0.49
SMARCA2-246ENST00000635739 BCANQ96GW7 911 aa12.01□□□□□ -0.49
SMARCA2-246ENST00000635739 WRNQ14191 1432 aaPredicted RBP eCLIP12.01□□□□□ -0.49
SMARCA2-246ENST00000635739 SUPT16HQ9Y5B9 1047 aaKnown RBP11.96□□□□□ -0.49
SMARCA2-246ENST00000635739 GOLGA3Q08378 1498 aa11.96□□□□□ -0.49
SMARCA2-246ENST00000635739 MROH2BQ7Z745 1585 aa11.96□□□□□ -0.5
SMARCA2-246ENST00000635739 ANP32EQ9BTT0 268 aa11.95□□□□□ -0.5
SMARCA2-246ENST00000635739 CLIP1P30622 1438 aa11.93□□□□□ -0.5
SMARCA2-246ENST00000635739 SOGA1O94964 1423 aa11.91□□□□□ -0.5
SMARCA2-246ENST00000635739 FKBP8Q14318 412 aa11.91□□□□□ -0.5
SMARCA2-246ENST00000635739 CCDC88BA6NC98 1476 aa11.89□□□□□ -0.51
SMARCA2-246ENST00000635739 ATP1B4Q9UN42 357 aaPredicted RBP11.87□□□□□ -0.51
SMARCA2-246ENST00000635739 NACADO15069 1562 aa11.87□□□□□ -0.51
SMARCA2-246ENST00000635739 BAZ1AQ9NRL2 1556 aaPredicted RBP11.86□□□□□ -0.51
SMARCA2-246ENST00000635739 ANP32CO43423 234 aa11.85□□□□□ -0.51
SMARCA2-246ENST00000635739 ABCC8Q09428 1581 aa11.85□□□□□ -0.51
SMARCA2-246ENST00000635739 WIZO95785 1651 aa11.85□□□□□ -0.51
SMARCA2-246ENST00000635739 CEP164Q9UPV0 1460 aa11.85□□□□□ -0.51
SMARCA2-246ENST00000635739 TSHZ2Q9NRE2 1034 aa11.83□□□□□ -0.52
SMARCA2-246ENST00000635739 DDX10Q13206 875 aaKnown RBP11.81□□□□□ -0.52
SMARCA2-246ENST00000635739 CDK11AQ9UQ88 783 aaPredicted RBP11.81□□□□□ -0.52
SMARCA2-246ENST00000635739 VPS8Q8N3P4 1428 aa11.79□□□□□ -0.52
SMARCA2-246ENST00000635739 FAM50AQ14320 339 aaKnown RBP11.78□□□□□ -0.52
SMARCA2-246ENST00000635739 BCL11AQ9H165 835 aa11.77□□□□□ -0.52
SMARCA2-246ENST00000635739 PABPN1Q86U42 306 aaKnown RBP eCLIP11.75□□□□□ -0.53
SMARCA2-246ENST00000635739 TRIM52Q96A61 297 aa11.74□□□□□ -0.53
SMARCA2-246ENST00000635739 TOP2AP11388 1531 aaKnown RBP11.72□□□□□ -0.53
SMARCA2-246ENST00000635739 RUSC2Q8N2Y8 1516 aa11.72□□□□□ -0.53
SMARCA2-246ENST00000635739 DHX57Q6P158 1386 aaKnown RBP11.69□□□□□ -0.54
SMARCA2-246ENST00000635739 RBM19Q9Y4C8 960 aaKnown RBP11.68□□□□□ -0.54
SMARCA2-246ENST00000635739 MYT1LQ9UL68 1186 aa11.68□□□□□ -0.54
SMARCA2-246ENST00000635739 UNC13AQ9UPW8 1703 aa11.67□□□□□ -0.54
SMARCA2-246ENST00000635739 HNRNPUQ00839 825 aaKnown RBP eCLIP11.66□□□□□ -0.54
SMARCA2-246ENST00000635739 RTL5Q5HYW3 569 aaPredicted RBP11.64□□□□□ -0.55
SMARCA2-246ENST00000635739 CCNB3Q8WWL7 1395 aa11.64□□□□□ -0.55
SMARCA2-246ENST00000635739 TONSLQ96HA7 1378 aa11.62□□□□□ -0.55
SMARCA2-246ENST00000635739 KANK4Q5T7N3 995 aaPredicted RBP11.62□□□□□ -0.55
SMARCA2-246ENST00000635739 HIRIP3Q9BW71 556 aaPredicted RBP11.62□□□□□ -0.55
SMARCA2-246ENST00000635739 BAZ1BQ9UIG0 1483 aaKnown RBP11.61□□□□□ -0.55
SMARCA2-246ENST00000635739 CCER2I3L3R5 266 aa11.61□□□□□ -0.55
SMARCA2-246ENST00000635739 KCNH8Q96L42 1107 aa11.6□□□□□ -0.55
SMARCA2-246ENST00000635739 SMARCA2P51531 1590 aa11.6□□□□□ -0.55
SMARCA2-246ENST00000635739 RAPGEF2Q9Y4G8 1499 aa11.58□□□□□ -0.56
SMARCA2-246ENST00000635739 SIN3AQ96ST3 1273 aa11.58□□□□□ -0.56
SMARCA2-246ENST00000635739 TIMELESSQ9UNS1 1208 aa11.58□□□□□ -0.56
SMARCA2-246ENST00000635739 IRX6P78412 446 aaPredicted RBP11.57□□□□□ -0.56
SMARCA2-246ENST00000635739 SMARCA4P51532 1647 aa11.56□□□□□ -0.56
SMARCA2-246ENST00000635739 BICRAQ9NZM4 1560 aa11.56□□□□□ -0.56
SMARCA2-246ENST00000635739 RAB3GAP2Q9H2M9 1393 aa11.54□□□□□ -0.56
SMARCA2-246ENST00000635739 P3H3Q8IVL6 736 aa11.54□□□□□ -0.56
SMARCA2-246ENST00000635739 ANP32AP39687 249 aaKnown RBP11.52□□□□□ -0.56
SMARCA2-246ENST00000635739 KIF21BO75037 1637 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms