RNA–Protein interactions for RNA: ENST00000633371.1

PHACTR4-209, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 3

Gene PHACTR4, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-209ENST00000633371 FBLN2P98095 1184 aa23.05■■□□□ 1.28
PHACTR4-209ENST00000633371 NUP160Q12769 1436 aa23.05■■□□□ 1.28
PHACTR4-209ENST00000633371 CEP162Q5TB80 1403 aa22.97■■□□□ 1.27
PHACTR4-209ENST00000633371 KIAA0586Q9BVV6 1533 aa22.96■■□□□ 1.27
PHACTR4-209ENST00000633371 IQGAP2Q13576 1575 aa22.94■■□□□ 1.26
PHACTR4-209ENST00000633371 CLASP1Q7Z460 1538 aa22.89■■□□□ 1.26
PHACTR4-209ENST00000633371 CLIP1P30622 1438 aa22.88■■□□□ 1.25
PHACTR4-209ENST00000633371 RANGAP1P46060 587 aaPredicted RBP22.87■■□□□ 1.25
PHACTR4-209ENST00000633371 ARHGAP35Q9NRY4 1499 aa22.86■■□□□ 1.25
PHACTR4-209ENST00000633371 UGGT2Q9NYU1 1516 aa22.86■■□□□ 1.25
PHACTR4-209ENST00000633371 SAMD9Q5K651 1589 aa22.84■■□□□ 1.25
PHACTR4-209ENST00000633371 SHROOM2Q13796 1616 aa22.83■■□□□ 1.25
PHACTR4-209ENST00000633371 ARAP1Q96P48 1450 aa22.8■■□□□ 1.24
PHACTR4-209ENST00000633371 DISP1Q96F81 1524 aa22.79■■□□□ 1.24
PHACTR4-209ENST00000633371 JPH4Q96JJ6 628 aa22.79■■□□□ 1.24
PHACTR4-209ENST00000633371 EFCAB5A4FU69 1503 aa22.77■■□□□ 1.24
PHACTR4-209ENST00000633371 OSCARQ8IYS5 282 aa22.77■■□□□ 1.24
PHACTR4-209ENST00000633371 KIAA0556O60303 1618 aa22.74■■□□□ 1.23
PHACTR4-209ENST00000633371 P3H3Q8IVL6 736 aa22.73■■□□□ 1.23
PHACTR4-209ENST00000633371 ERCC6L2Q5T890 1561 aa22.72■■□□□ 1.23
PHACTR4-209ENST00000633371 FHOD3Q2V2M9 1422 aa22.72■■□□□ 1.23
PHACTR4-209ENST00000633371 PRG4Q92954 1404 aaPredicted RBP22.69■■□□□ 1.22
PHACTR4-209ENST00000633371 VPS8Q8N3P4 1428 aa22.63■■□□□ 1.21
PHACTR4-209ENST00000633371 CARMIL2Q6F5E8 1435 aa22.61■■□□□ 1.21
PHACTR4-209ENST00000633371 PCF11O94913 1555 aaKnown RBP22.55■■□□□ 1.2
PHACTR4-209ENST00000633371 FMN1Q68DA7 1419 aa22.53■■□□□ 1.2
PHACTR4-209ENST00000633371 LRRIQ1Q96JM4 1722 aa22.52■■□□□ 1.2
PHACTR4-209ENST00000633371 CASKIN1Q8WXD9 1431 aa22.49■■□□□ 1.19
PHACTR4-209ENST00000633371 TTBK1Q5TCY1 1321 aaPredicted RBP22.48■■□□□ 1.19
PHACTR4-209ENST00000633371 PTPRGP23470 1445 aa22.48■■□□□ 1.19
PHACTR4-209ENST00000633371 ABCA8O94911 1581 aa22.47■■□□□ 1.19
PHACTR4-209ENST00000633371 ARHGEF11O15085 1522 aa22.47■■□□□ 1.19
PHACTR4-209ENST00000633371 RAPGEF6Q8TEU7 1601 aa22.46■■□□□ 1.19
PHACTR4-209ENST00000633371 PLB1Q6P1J6 1458 aa22.46■■□□□ 1.19
PHACTR4-209ENST00000633371 FYCO1Q9BQS8 1478 aa22.45■■□□□ 1.18
PHACTR4-209ENST00000633371 RIMBP3CA6NJZ7 1639 aa22.44■■□□□ 1.18
PHACTR4-209ENST00000633371 RIMBP3BA6NNM3 1639 aa22.44■■□□□ 1.18
PHACTR4-209ENST00000633371 RIMBP3Q9UFD9 1639 aa22.44■■□□□ 1.18
PHACTR4-209ENST00000633371 NUP153P49790 1475 aaKnown RBP22.4■■□□□ 1.18
PHACTR4-209ENST00000633371 HECW1Q76N89 1606 aa22.39■■□□□ 1.17
PHACTR4-209ENST00000633371 CFAP43Q8NDM7 1665 aa22.37■■□□□ 1.17
PHACTR4-209ENST00000633371 UACAQ9BZF9 1416 aa22.36■■□□□ 1.17
PHACTR4-209ENST00000633371 TIAM1Q13009 1591 aa22.35■■□□□ 1.17
PHACTR4-209ENST00000633371 MAP3K1Q13233 1512 aa22.35■■□□□ 1.17
PHACTR4-209ENST00000633371 EPRSP07814 1512 aaKnown RBP22.33■■□□□ 1.17
PHACTR4-209ENST00000633371 ATP1B4Q9UN42 357 aaPredicted RBP22.33■■□□□ 1.17
PHACTR4-209ENST00000633371 CDK13Q14004 1512 aaKnown RBP22.32■■□□□ 1.16
PHACTR4-209ENST00000633371 ABCC2Q92887 1545 aa22.32■■□□□ 1.16
PHACTR4-209ENST00000633371 ADCY10Q96PN6 1610 aa22.32■■□□□ 1.16
PHACTR4-209ENST00000633371 UHRF1BP1LA0JNW5 1464 aa22.32■■□□□ 1.16
PHACTR4-209ENST00000633371 KANK4Q5T7N3 995 aaPredicted RBP22.29■■□□□ 1.16
PHACTR4-209ENST00000633371 PPARGC1BQ86YN6 1023 aaKnown RBP22.29■■□□□ 1.16
PHACTR4-209ENST00000633371 ATP10BO94823 1461 aa22.28■■□□□ 1.16
PHACTR4-209ENST00000633371 MAGI3Q5TCQ9 1506 aa22.27■■□□□ 1.16
PHACTR4-209ENST00000633371 ARID3CA6NKF2 412 aa22.27■■□□□ 1.16
PHACTR4-209ENST00000633371 CCDC18Q5T9S5 1454 aa22.27■■□□□ 1.16
PHACTR4-209ENST00000633371 ZCCHC11Q5TAX3 1644 aaKnown RBP22.23■■□□□ 1.15
PHACTR4-209ENST00000633371 LRRC9Q6ZRR7 1453 aa22.22■■□□□ 1.15
PHACTR4-209ENST00000633371 KDM5BQ9UGL1 1544 aa22.22■■□□□ 1.15
PHACTR4-209ENST00000633371 APLP2Q06481 763 aa22.21■■□□□ 1.15
PHACTR4-209ENST00000633371 CYB5RLQ6IPT4 315 aa22.19■■□□□ 1.14
PHACTR4-209ENST00000633371 DNAJC5Q9H3Z4 198 aa22.15■■□□□ 1.14
PHACTR4-209ENST00000633371 EHBP1L1Q8N3D4 1523 aa22.13■■□□□ 1.13
PHACTR4-209ENST00000633371 MTUS2Q5JR59 1369 aa22.11■■□□□ 1.13
PHACTR4-209ENST00000633371 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.1■■□□□ 1.13
PHACTR4-209ENST00000633371 TROQ12816 1431 aaPredicted RBP22.1■■□□□ 1.13
PHACTR4-209ENST00000633371 HNRNPUL2Q1KMD3 747 aaKnown RBP22.1■■□□□ 1.13
PHACTR4-209ENST00000633371 KIF14Q15058 1648 aa22.08■■□□□ 1.13
PHACTR4-209ENST00000633371 SUPT6HQ7KZ85 1726 aaKnown RBP22.07■■□□□ 1.12
PHACTR4-209ENST00000633371 CDK11AQ9UQ88 783 aaPredicted RBP22.05■■□□□ 1.12
PHACTR4-209ENST00000633371 PLEKHD1A6NEE1 506 aa22.04■■□□□ 1.12
PHACTR4-209ENST00000633371 NCOA2Q15596 1464 aa22.03■■□□□ 1.12
PHACTR4-209ENST00000633371 PHLDB1Q86UU1 1377 aa22.02■■□□□ 1.12
PHACTR4-209ENST00000633371 ASXL2Q76L83 1435 aa22.01■■□□□ 1.11
PHACTR4-209ENST00000633371 ABCC10Q5T3U5 1492 aa22■■□□□ 1.11
PHACTR4-209ENST00000633371 WDR7Q9Y4E6 1490 aa21.98■■□□□ 1.11
PHACTR4-209ENST00000633371 MAPKBP1O60336 1514 aa21.97■■□□□ 1.11
PHACTR4-209ENST00000633371 NPM1P06748 294 aaKnown RBP eCLIP21.97■■□□□ 1.11
PHACTR4-209ENST00000633371 CDC42BPAQ5VT25 1732 aa21.95■■□□□ 1.1
PHACTR4-209ENST00000633371 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.95■■□□□ 1.1
PHACTR4-209ENST00000633371 TTC37Q6PGP7 1564 aa21.94■■□□□ 1.1
PHACTR4-209ENST00000633371 KCNH8Q96L42 1107 aa21.92■■□□□ 1.1
PHACTR4-209ENST00000633371 MYOM3Q5VTT5 1437 aa21.9■■□□□ 1.1
PHACTR4-209ENST00000633371 RRBP1Q9P2E9 1410 aaKnown RBP21.9■■□□□ 1.1
PHACTR4-209ENST00000633371 GPATCH8Q9UKJ3 1502 aaKnown RBP21.9■■□□□ 1.1
PHACTR4-209ENST00000633371 CDC42BPBQ9Y5S2 1711 aa21.89■■□□□ 1.1
PHACTR4-209ENST00000633371 ABCA9Q8IUA7 1624 aa21.88■■□□□ 1.09
PHACTR4-209ENST00000633371 TRIM26Q12899 539 aaPredicted RBP21.87■■□□□ 1.09
PHACTR4-209ENST00000633371 FGD6Q6ZV73 1430 aa21.87■■□□□ 1.09
PHACTR4-209ENST00000633371 CCNB3Q8WWL7 1395 aa21.87■■□□□ 1.09
PHACTR4-209ENST00000633371 ITSN2Q9NZM3 1697 aa21.85■■□□□ 1.09
PHACTR4-209ENST00000633371 MYO5CQ9NQX4 1742 aa21.85■■□□□ 1.09
PHACTR4-209ENST00000633371 PREX2Q70Z35 1606 aa21.84■■□□□ 1.09
PHACTR4-209ENST00000633371 PTPN23Q9H3S7 1636 aa21.83■■□□□ 1.08
PHACTR4-209ENST00000633371 KIF13AQ9H1H9 1805 aa21.81■■□□□ 1.08
PHACTR4-209ENST00000633371 GLI2P10070 1586 aa21.81■■□□□ 1.08
PHACTR4-209ENST00000633371 DIP2BQ9P265 1576 aa21.81■■□□□ 1.08
PHACTR4-209ENST00000633371 MIA2Q96PC5 1412 aa21.8■■□□□ 1.08
PHACTR4-209ENST00000633371 TCOF1Q13428 1488 aaKnown RBP21.8■■□□□ 1.08
PHACTR4-209ENST00000633371 PLCH2O75038 1416 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms